HsaEX6015455 @ hg38
Exon Skipping
Gene
ENSG00000169994 | MYO7B
Description
myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
Coordinates
chr2:127576595-127580822:+
Coord C1 exon
chr2:127576595-127576708
Coord A exon
chr2:127578133-127578286
Coord C2 exon
chr2:127580746-127580822
Length
154 bp
Sequences
Splice sites
3' ss Seq
TGAGGCACCCTGTCCCTCAGGGG
3' ss Score
5.27
5' ss Seq
TGGGTAATG
5' ss Score
5.68
Exon sequences
Seq C1 exon
GCTCCCGAGGAGCGGAACTACCATATCTTCTACTGCATGCTCATGGGGGTGAGTGCTGAGGACAAGCAGCTGCTGAGCCTGGGCACGCCCTCCGAGTACCACTACCTGACCATG
Seq A exon
GGGAACTGCACTTCCTGTGAGGGGCTCAACGACGCCAAGGACTACGCCCACATCCGCTCGGCCATGAAGATCCTCCAGTTCTCCGACTCCGAGAGCTGGGACGTCATCAAGCTGCTGGCTGCCATTCTCCACCTGGGGAATGTGGGGTTCATGG
Seq C2 exon
CTTCGGTCTTCGAGAACCTGGACGCCTCAGACGTGATGGAGACGCCCGCCTTTCCCACCGTGATGAAGTTACTGGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000169994-'12-13,'12-11,13-13=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0006316=Myosin_head=FE(5.4=100)
A:
PF0006316=Myosin_head=FE(7.5=100)
C2:
PF0006316=Myosin_head=FE(3.7=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CGAGGAGCGGAACTACCATAT
R:
CTCCAGTAACTTCATCACGGTGG
Band lengths:
186-340
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains