HsaEX6037014 @ hg38
Exon Skipping
Gene
ENSG00000185842 | DNAH14
Description
dynein axonemal heavy chain 14 [Source:HGNC Symbol;Acc:HGNC:2945]
Coordinates
chr1:225266641-225273125:+
Coord C1 exon
chr1:225266641-225266769
Coord A exon
chr1:225270735-225270866
Coord C2 exon
chr1:225272955-225273125
Length
132 bp
Sequences
Splice sites
3' ss Seq
CCTTTTTATCCTTATCACAGAAT
3' ss Score
7.78
5' ss Seq
CAGGTAACA
5' ss Score
8.88
Exon sequences
Seq C1 exon
ATTCTAATATTTATTGATGATATGAATATGCCAGTATCAGATATGTATGGAGCACAGCCACCCCTGGAATTGATAAGACAATTGTTAGATTTGGGAGGAGTTTATGATACTGAAAAAAATACATGGAAG
Seq A exon
AATATTCAAGATCTGTCTATAGTTGCAGCTTGTGTTCCAGTTGTGAATGATATCAGCCCACGTCTTCTCAAACACTTTTCCATGCTGGTATTACCTCATCCTTCACAAGACATCTTATGTACTATTTTCCAG
Seq C2 exon
CTTCTCCTAGGATTGCTGCAAGCTGACAGGACTGTTGTTAACTCCAAAGAGATGGCTGCTCTGCTCTTTGTTCATGAAGCCACCCGAGTATTTCACGATCGCTTAATTGATTTCACTGATAAAAGCCTTTTCTATCGGTTGCTTTCAAGGGAACTTGAGAACTGTTTTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000185842-'97-131,'97-128,99-131
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF127752=AAA_7=FE(19.2=100)
A:
PF127752=AAA_7=FE(19.6=100)
C2:
PF127752=AAA_7=PD(10.9=43.9),PF127802=AAA_8=PU(10.0=45.6)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TATGTATGGAGCACAGCCACC
R:
AGTTCCCTTGAAAGCAACCGA
Band lengths:
243-375
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains