HsaEX6083055 @ hg38

Exon Skipping

Gene

ENSG00000196378 | ZNF34

Description

zinc finger protein 34 [Source:HGNC Symbol;Acc:HGNC:13098]

Coordinates

chr8:144773114-144778525:-

Coord C1 exon

chr8:144778439-144778525

Coord A exon

chr8:144778038-144778164

Coord C2 exon

chr8:144773114-144774605

Length

127 bp

Sequences

Splice sites

3' ss Seq

AGTAGTCCCTGTCATTCCAGGCC

3' ss Score

4.81

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

CTCCTCAGTGACCAGCTCCTGCTCACTGCCCTCAGAAAGCCCAACCCTCAGGCAATGGCGGCCTTGTTCCTGTCTGCCCCACCCCAG

Seq A exon

GCCGAGGTGACCTTCGAGGACGTGGCTGTGTACCTCTCCCGGGAGGAATGGGGCCGCCTGGGCCCTGCTCAGAGGGGCCTCTACAGGGACGTGATGCTGGAGACCTACGGGAACCTAGTCTCACTGG

Seq C2 exon

CTCTTGGGACCAGAACTGAGTACAAGGAGTTGACTTCACAGGAGACATTTGGTGAGGAAGATCCCCAGGGATCTGAGCCAGTAGAAGCCTGTGACCACATCAGTAAGTCAGAGGGGAGCCTGGAAAAGCTAGTGGAGCAGAGAGGCCCCAGGGCAGTCACACTGACCAACGGGGAGAGCAGCAGGGAGTCTGGGGGAAACCTCAGGTTGCTGTCAAGACCTGTTCCTGATCAGAGACCTCACAAATGTGATATATGTGAGCAAAGTTTTGAACAGAGATCATATCTCAACAACCATAAGCGTGTACACAGGTCAAAAAAAACAAATACAGTTCGTAACTCTGGGGAAATCTTCAGTGCAAACTTAGTTGTTAAAGAAGATCAGAAAATTCCTACTGGGAAAAAATTGCATTATTGCAGTTACTGTGGGAAAACATTCAGGTACAGTGCCAACCTTGTCAAGCATCAGCGGCTTCACACTGAAGAGAAGCCCTACAAATGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196378_MULTIEX1-6/7=5-C2

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.007 A=0.012 C2=0.261

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0009621=zf-C2H2=WD(100=5.1),PF0013017=C1_1=WD(100=11.9),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF0013017=C1_1=WD(100=11.9),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8)

Main Inclusion Isoform:

ENSP00000434049