HsaEX6083067 @ hg19
Exon Skipping
Gene
ENSG00000186777 | Z95704.2
Description
zinc finger protein 732 [Source:HGNC Symbol;Acc:37138]
Coordinates
chr4:289227-299204:-
Coord C1 exon
chr4:299097-299204
Coord A exon
chr4:289818-289944
Coord C2 exon
chr4:289227-289322
Length
127 bp
Sequences
Splice sites
3' ss Seq
TGATACATATATATTTTCAGGAA
3' ss Score
7.79
5' ss Seq
TGGGTGAGG
5' ss Score
6.74
Exon sequences
Seq C1 exon
GGAGGCGTCGGTGATTCGGTCACAGCCTCAGCCTCCGTCGCTCTGTGACCTGCGGGTATTGGATGATTCGTAGCTGAGACTCCGCTACACCCCTGAAGTGGGGAAATG
Seq A exon
GAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGATCTCCCTGG
Seq C2 exon
GTGTTGCTATCTCTAACCCAGACCTGGTCATCTATCTGGAGCAAAGAAAGGAGCCCTACAAAGTGAAGATACATGAGACAGTAGCCAAACACCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000186777-'1-3,'1-2,2-3=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
PF0135222=KRAB=WD(100=95.3)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGGCGTCGGTGATTCGGT
R:
TGGGTGTTTGGCTACTGTCTC
Band lengths:
202-329
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)