Special

HsaEX0072064 @ hg19

Exon Skipping

Gene
ENSG00000186777 | Z95704.2
Description
zinc finger protein 732 [Source:HGNC Symbol;Acc:37138]
Coordinates
chr4:264464-289944:-
Coord C1 exon
chr4:289818-289944
Coord A exon
chr4:289227-289322
Coord C2 exon
chr4:264464-266419
Length
96 bp
Sequences
Splice sites
3' ss Seq
TAATTTTTTAAAATAAACAGGTG
3' ss Score
5.04
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
Exon sequences
Seq C1 exon
GAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGATCTCCCTGG
Seq A exon
GTGTTGCTATCTCTAACCCAGACCTGGTCATCTATCTGGAGCAAAGAAAGGAGCCCTACAAAGTGAAGATACATGAGACAGTAGCCAAACACCCAG
Seq C2 exon
CTGTGTGTTCTCATTTCACCCAAGACTTTTTGCCAGTGCAGGGGATAGAAGATTCGTTCCACAAACTTATATTAAGAAGATATGAGAAATGTGGACATGAGAATTTAGAATTAAGAAAAAGCTGTAAAAGGAAGGTGCAGAAAGGAGGTTATAATGAATTTAATCAATGCTTGTCAACTATCCAGAGCAAAATATTTCAGTGTAATGTACATGTCAAAGTATTTAGTACATTTTCAAATTCAAACCAACGTAGGATAAGACATACTGGAGAGAAACACTTTAAAGAATGTGGCAAGTCATTTCAGAAGTTCTCAGACCTAACTCAACATCAAGGAATTCATGCTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAAAGACTTTAAATGGTATTTAATCTTTAATGAATATGAGATAATTCATACTGGAGAGAAACCCTTCACATGTGAAGAATGTGGCAACATCTTTACCACATCCTCAAACTTTGCTAAACATAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000186777-'2-4,'2-3,3-4
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact

Alternative protein isoforms (Ref)

Show structural model
Features
Disorder rate (Iupred):
  C1=0.000 A=0.000 C2=0.023
Domain overlap (PFAM):

C1:
PF0135222=KRAB=WD(100=95.3)
A:
PF0135222=KRAB=PD(0.1=0.0)
C2:
PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.1)


Main Inclusion Isoform:


Main Skipping Isoform:
NA


Other Inclusion Isoforms:
NA


Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACAGGAACCTGATCTCCCTGG
R:
ACCTCCTTTCTGCACCTTCCT
Band lengths:
170-266
Functional annotations
There are 0 annotated functions for this event


GENOMIC CONTEXT[edit]

INCLUSION PATTERN[edit]


SPECIAL DATASETS

  • Autistic and control brains
  • Pre-implantation embryo development