MmuEX6059059 @ mm9

Exon Skipping

Gene

ENSMUSG00000071291 | Zfp58

Description

zinc finger protein 58 [Source:MGI Symbol;Acc:MGI:99205]

Coordinates

chr13:67591103-67595665:-

Coord C1 exon

chr13:67595539-67595665

Coord A exon

chr13:67594943-67595038

Coord C2 exon

chr13:67591103-67593086

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTCTCTTTTCCTCCAAACAGGTC

3' ss Score

12.91

5' ss Seq

CAGGTGTGT

5' ss Score

6.99

Exon sequences

Seq C1 exon

GAAATGCTGTCATTCTGGGATGTGGCCATTGATTTTTCTCCAGAAGAGAGAGAATGCCTGGAGCCTGATCAGTGGGATCTGTACAGGGACGTGATGCTGGAGAATTACAGCCATCTGGATTTCCTGG

Seq A exon

GTCTTGCTCTCTCTAAGCCATTCCTGGTGACATTTCTGGAGCAAAGACAAGGGCCTTGGGACGTGAAGAGACAAGCAGCAGCCGCTGTGCACCCAG

Seq C2 exon

GAAAAACCGTCAACAAATGTAAAGATTTCAGCAAGGCCTTTTTTTGCAAGTCACTGCTTACTCAGCACCAGAGAATTCGTACAGGGGAGAAAGCCTTCAAGTGTGAAGAATGTGGTAAGGCCTTTAATAATCGTTCAAACCTTTCTGAACACAAGAGAATACATACTGGAGAAAAACCCTACAAATGTGAAGAATGTGGTAAGGCCTTTCGTATTCGCTCAAAACTTTCTACACACCAGAGAGTTCATACGGGAGAAAAACCCTACAAATGTGAAGAATGTGGTAAGGCTTTTAATAGTCATTCAAACCTTTCTGAACACAAGAGAATCCATACTGGAGAAAAACCGTACAAATGTGAAGAATGTGGCAAGGCCTTCAGTACTCGCTCAACATATTATAGACACCAGAAAAACCATACTGGGAAAAAACCATACAAGTGTGAAGAATGCGCCAAAGAATTTTCCTACCCTTCATTGCTTAAGGTACATCAAAGAATTCAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000071291-'7-13,'7-12,8-13=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.061 C2=0.037

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=97.6)

A:

PF0135222=KRAB=PD(0.1=0.0),PF054957=zf-CHY=PU(1.4=3.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.0),PF0013017=C1_1=WD(100=12.5),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF0013017=C1_1=WD(100=12.0),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=6.2),PF0009621=zf-C2H2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2)

Main Inclusion Isoform:

ENSMUSP00000075487