HsaEX6087931 @ hg19
Exon Skipping
Gene
ENSG00000107890 | ANKRD26
Description
ankyrin repeat domain 26 [Source:HGNC Symbol;Acc:29186]
Coordinates
chr10:27333086-27337908:-
Coord C1 exon
chr10:27337730-27337908
Coord A exon
chr10:27335282-27335452
Coord C2 exon
chr10:27333086-27333119
Length
171 bp
Sequences
Splice sites
3' ss Seq
TTCCCATGGATTTTTTAAAGTAG
3' ss Score
2.51
5' ss Seq
AAGGTAAAA
5' ss Score
8.38
Exon sequences
Seq C1 exon
GTTGAAGAAGAAAGGAAAAAACACAGAAATAATGAAATGGAAGTATCAGCAAACATACATGATGGTGCTACTGATGATGCTGAAGATGATGATGATGATGATGGATTAATTCAAAAAAGAAAGAGTGGAGAAACTGATCATCAGCAATTTCCCAGGAAGGAAAATAAAGAGTATGCTAG
Seq A exon
TAGTGGTCCTGCCTTGCAAATGAAGGAAGTAAAGAGCACTGAAAAAGAAAAACGGACCTCGAAAGAATCTGTGAATTCACCAGTGTTTGGGAAGGCCAGTTTACTAACTGGTGGCCTGCTACAAGTGGATGATGACAGCAGTTTAAGTGAAATAGATGAGGATGAAGGAAG
Seq C2 exon
GCCTACTAAGAAAACATCTAATGAAAAGAACAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000107890-'25-28,'25-25,26-28=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=0.843 C2=1.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)