HsaEX6094706 @ hg19

Exon Skipping

Gene

ENSG00000196357 | ZNF565

Description

zinc finger protein 565 [Source:HGNC Symbol;Acc:26726]

Coordinates

chr19:36673188-36686058:-

Coord C1 exon

chr19:36685932-36686058

Coord A exon

chr19:36685135-36685230

Coord C2 exon

chr19:36673188-36674635

Length

96 bp

Sequences

Splice sites

3' ss Seq

ATTTCTTTTCCTGTAAACAGGAC

3' ss Score

10.16

5' ss Seq

CAGGTAAGC

5' ss Score

9.88

Exon sequences

Seq C1 exon

GGACTGGTGACATTCAGGGACGTGGCCATAGAGTTCTCTCTGGAAGAATGGAAGTGCCTGGAACCTGCTCAGAGGGACTTGTACAGGGAGGTGACTCTGGAGAACTTTGGTCACTTGGCCTCACTAG

Seq A exon

GACTCTCCATTTCTAAGCCTGATGTCGTCTCCTTATTGGAGCAAGGGAAAGAGCCCTGGATGATTGCAAATGATGTGACAGGACCATGGTGCCCAG

Seq C2 exon

ACTTGGAGTCCAGGTGTGAGAAATTTCTACAAAAAGACATTTTTGAAATCGGGGCATTCAACTGGGAGATAATGGAAAGCCTTAAATGCAGTGACCTGGAGGGCTCCGATTTTAGAGCTGACTGGGAATGCGAAGGCCAGTTTGAGAGACAAGTCAATGAAGAGTGCTATTTTAAGCAAGTGAACGTCACCTATGGACATATGCCCGTGTTCCAGCATCACACGTCTCACACTGTACGTCAGAGCAGGGAGACTGGTGAGAAACTGATGGAATGTCATGAATGTGGGAAAGCATTTAGCCGTGGCTCACACCTTATTCAACATCAGAAAATTCACACTGGTGAAAAACCCTTTGGATGTAAGGAATGTGGGAAGGCCTTCAGCCGTGCCTCACACCTTGTTCAGCATCAGAGAATTCACACGGGTGAGAAACCTTATGACTGTAAGGACTGTGGGAAGGCCTTTGGTCGTACATCAGAACTTATTCTACATCAGAGACTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000196357-'4-5,'4-4,5-5=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.050

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.9),PF0403211=Rpr2=WD(100=13.5),PF097235=Zn-ribbon_8=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF097235=Zn-ribbon_8=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF097235=Zn-ribbon_8=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=6.1),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSP00000347234