HsaEX6094716 @ hg19

Exon Skipping

Gene

ENSG00000189042 | ZNF567

Description

zinc finger protein 567 [Source:HGNC Symbol;Acc:28696]

Coordinates

chr19:37203288-37212223:+

Coord C1 exon

chr19:37203288-37203414

Coord A exon

chr19:37203683-37203769

Coord C2 exon

chr19:37209850-37212223

Length

87 bp

Sequences

Splice sites

3' ss Seq

GTCTTTTTTTCACTTTTCAGGGT

3' ss Score

11.72

5' ss Seq

TGGGTGAGT

5' ss Score

8.73

Exon sequences

Seq C1 exon

GGATCAGTGTCTTTCAATGATGTGACTGTGGACTTCACTCAGGAGGAGTGGCAGCACCTGGATCATGCTCAGAAGACTCTATATATGGATGTGATGTTGGAAAACTATTGCCACCTCATCTCTGTGG

Seq A exon

GGTGTCACATGACCAAACCTGATGTGATCCTCAAGTTGGAACGAGGAGAAGAGCCATGGACATCATTTGCAGGTCATACCTGCTTGG

Seq C2 exon

AAGAAAACTGGAAAGCTGAAGACTTTTTAGTGAAATTCAAGGAACACCAAGAGAAGTATTCTAGATCAGTTGTAAGCATCAACCACAAAAAACTGGTGAAGGAGAAGAGTAAAATATATGAAAAGACATTTACTCTAGGCAAAAACCCTGTGAATTCAAAAAATCTACCTCCTGAATATGATACTCATGGAAGGATTTTGAAAAATGTTTCAGAATTAATCATCAGTAATCTAAATCCTGCAAGAAAGAGACTTAGTGAGTATAATGGATATGGGAAATCACTCCTGAGTACTAAACAAGAGACTACTCATCCTGAAGTCAAATCCCATAATCAAAGTGCCAGAGCTTTCAGTCATAATGAAGTTCTTATGCAGTATCAGAAAACGGAAACTCCAGCACAGTCATTTGGATATAATGACTGTGAGAAATCATTCCTTCAAAGGGGAGGCCTGATTACACATAGTAGACCTTACAAAGGAGAAAACCCATCTGTATATAAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000189042-'4-6,'4-5,6-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.177

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.5),PF0013017=C1_1=WD(100=11.5),PF134651=zf-H2C2_2=WD(100=4.5),PF0062824=PHD=WD(100=8.0),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.4),PF127602=Zn_Tnp_IS1595=WD(100=8.7),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF097235=Zn-ribbon_8=WD(100=7.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSP00000441838