HsaEX6096542 @ hg19

Exon Skipping

Gene

ENSG00000197497 | ZNF665

Description

zinc finger protein 665 [Source:HGNC Symbol;Acc:25885]

Coordinates

chr19:53666552-53686232:-

Coord C1 exon

chr19:53686137-53686232

Coord A exon

chr19:53678698-53678824

Coord C2 exon

chr19:53666552-53669600

Length

127 bp

Sequences

Splice sites

3' ss Seq

AAATGTGTTTTTCATTTTAGGGA

3' ss Score

10.3

5' ss Seq

TGGGTGAGG

5' ss Score

6.74

Exon sequences

Seq C1 exon

GGATTGAATTCTAAAGTCTCTTTCATGTTACCCAAGGTAGAACCCTGGAAGAAGAGGAAGAGGAAGGCAAAGGAGTCAGGGATGGCTCTTCCTCAG

Seq A exon

GGACAGTTGACATTCAAGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGACATGCCTGGACCCTGCTCAGAAGACTTTGTACAGGGACGTCATGTTGGAGAATTATAGGAACCTGGTCTCCCTGG

Seq C2 exon

ATATCTCTTGTAAATGTGTAAACACGGATTTGCCACCAAAGGGGAAGAACAATATGGGAGAAGCGTTCTACACGGTGAAGTTGGAGAGACTTGAAAGCTGTGACACTGTAGGCTTGTCCTTCCAGGAAGTTCAGAAAAATACATACGACTTTGAGTGTCAGTGGAAAGATGATGAAGGAAATTATAAAACAGTACTTATGTTGCAAAAAGAAAATCTCCCTGGTAGAAGAGCTCAACGTGATAGAAGGGCTGCAGGAAACAGGCATATTGAAAATCAGCTTGGAGTAAGCTTTCAGTCACATCTCCCTGAACTGCAGCAATTTCAACATGAAGGGAAAATTTATGAATACAATCAAGTTGAGAAGTCTCCTAATAATCGAGGAAAACATTATAAATGTGATGAATGTGGCAAGGTCTTCAGTCAAAACTCACGGCTAACAAGTCATAAGAGAATTCATACTGGAGAGAAGCCTTACCAGTGTAATAAGTGTGGCAAAGCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197497-'1-2,'1-1,2-2=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.100

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF079757=C1_4=WD(100=8.8),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF097235=Zn-ribbon_8=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF0013017=C1_1=WD(100=9.6),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2)

Main Inclusion Isoform:

ENSP00000379702