HsaEX6101527 @ hg38

Exon Skipping

Gene

ENSG00000234284 | ZNF879

Description

zinc finger protein 879 [Source:HGNC Symbol;Acc:HGNC:37273]

Coordinates

chr5:179027473-179035064:+

Coord C1 exon

chr5:179027473-179027599

Coord A exon

chr5:179028032-179028127

Coord C2 exon

chr5:179032205-179035064

Length

96 bp

Sequences

Splice sites

3' ss Seq

TCTTTCTTGTTCATGAACAGGGA

3' ss Score

8.81

5' ss Seq

TCGGTGAGT

5' ss Score

11.11

Exon sequences

Seq C1 exon

GAGTCCGTGACGTTCAGGGATGTGGCCGTGTTCTTCAGCCAGGACGAGTGGTTGCACCTGGACTCTGCCCAGAGAGCCTTGTACCGGGAGGTGATGCTGGAGAACTACAGCATCCTGGTCTCACTGG

Seq A exon

GGATTCTCTTTTCCAAGCCAAAGGTCATCTCCCAGTTAGAGCAAGGAGAAGACCCCTGGATGGTGGAGAGTGGAGTTCCCCAAGGCGCACATCTCG

Seq C2 exon

GATGGGAAAGCTTGTTTGGAACCATAGTTTCTAAAGAAGAAAATCAGGAAGTCATGAAAAAACTCATAATTGATGGCACATTTGACTTCAAGTTGGAGAAGACCTACATAAATGAAGATAAGTTAGAGAAGCAACAAGGCAAAAAGAACAGACTTTTCAGTAAAGTGTTAGTTACCATCAAAAAAGTCTACATGAAGGAGAGGAGCTTTAAAGGTGTTGAATTTGGGAAAAATCTTGGTCTAAAATCATCGCTTATTAGAAAACCGAGAATAGTTTCCAGAGGAAGGAGACCCCGTTCACAGCAGTATTCAGTTCTCTTTAAACAACTGGGGGTCAACACAGTGCGTAAATGTTATAAATGTAATATCTGTGGGAAAATCTTCCTCCACAGTTCCTCCCTGAGTAAACACCAGAGAATCCACACTGGAGAGAAGCTCTATAAATGTAAGGAATGTAGGAAAGCCTTCAGCCAAAGCTCATCCCTAACTCAGCACTTGAGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000234284-'7-6,'7-4,8-6

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.034 A=0.144 C2=0.054

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4)

Main Inclusion Isoform:

ENSP00000414887