HsaEX7003633 @ hg38
Exon Skipping
Gene
ENSG00000181315 | ZNF322
Description
zinc finger protein 322 [Source:HGNC Symbol;Acc:HGNC:23640]
Coordinates
chr6:26643659-26658851:-
Coord C1 exon
chr6:26658777-26658851
Coord A exon
chr6:26658558-26658646
Coord C2 exon
chr6:26643659-26643728
Length
89 bp
Sequences
Splice sites
3' ss Seq
ATTATTGATTTTTCCTCTAGGAG
3' ss Score
9.06
5' ss Seq
ACGGTAAGT
5' ss Score
11.81
Exon sequences
Seq C1 exon
AGCTGGTCGGAACTGATGGCTACCAGTGGCAGGTACTTCCTGCAGGAGAAACAGTGTAAGCAAAGATGGGAAGAG
Seq A exon
GAGAGGCAAGAATTGAGTGTTGTGAATAGTTCTGAACTAGAGACCTTTTGAAACCAAAAGGAAGATGGTCTTGAGTCTTTCTTGTTACG
Seq C2 exon
AATGCTATCTTCTTTGAGAAGTCAAATTGTCAGGATCAGGAATGTATGTTTTCTTCCATCTGGATTCTAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000181315-'3-6,'3-1,4-6=AN
Average complexity
A_C3
Mappability confidence:
100%=75=83%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTGGTCGGAACTGATGGCTAC
R:
TCCAGATGGAAGAAAACATACATTCC
Band lengths:
137-226
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains