HsaINT0064193 @ hg19
Intron Retention
Gene
ENSG00000130720 | FIBCD1
Description
fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:25922]
Coordinates
chr9:133787179-133799267:-
Coord C1 exon
chr9:133799131-133799267
Coord A exon
chr9:133787276-133799130
Coord C2 exon
chr9:133787179-133787275
Length
11855 bp
Sequences
Splice sites
5' ss Seq
ACGGTGAGT
5' ss Score
11.45
3' ss Seq
TCCCCATCTTCCCTTTGCAGGTG
3' ss Score
13.77
Exon sequences
Seq C1 exon
GCTCCCGGCCCCGAGACTGTCTGGACGTCCTCCTAAGCGGACAGCAGGACGATGGCGTCTACTCTGTCTTTCCCACCCACTACCCGGCCGGCTTCCAGGTGTACTGTGACATGCGCACGGACGGCGGCGGCTGGACG
Seq A exon
GTGAGTGTCCCAGGCTGGGCGGGCGGCAGGGCAGGCACCGGGGACCGTGAGGCTGTGTACCTGAACCCGGGCATTCCGAGCAGCTTCCTACCCAGCCCTCCACCATGGATCTGTGGACTGGCCCTGCCCTGGTGCCCTTCTGCCTGGCCTGACCCCACCCCTACAGAAGAGGGGAACAGGGGACTCTGTGAGCTGACCCTGGGGTACCCACTCTGGAGCGGACATTAGGCAGGAGCCACCTTGGGCTCCCTGAGATCCCCAGCTGTGGCTCTTCCAGCAGGGGGTGGGGCGGGGTTTGGGCCTAGGACGACACATGGCAGCAGGAACCTGTTGCTAACGTGGGTTCCAGGGCTGATGTGTGTGGGCGCCCGGCTTTTTGAACTACCCAATACACGGCGCGTGTGCAGAAGAAAAAGGAGGAGTGTGGCTGGAGGAGCAGAGACCCCCCACAGCTATGGGCTGACAAGTGCTGTCTGATTCCTGCACCTCCTGGTTCCTGCCTGGGTGGGAAACAGGAGCGAGATGCCCCAACTGCCAGTCACAGGGCAGGGGCGGGACCACAGAAGGTGCTGGGAGAATGGGGCAGACGCCCTGCTTTGAAGACCAGGAGGACTGGCTCTTTAAGGCTTCTCAGCTTCACATTTCATTTCAGTTGGACAGACATTTTTGAGCACCTACTGTATACTGGGTTCCGGGGAAGCACAGAGATGGAGAAGCCCCTGTCCCAGTCCTCCCGAGGAATTTACACGCCAGGGGGCATTGGGGGCGGAAGAAGTCACTGTAGCAGAGGGGAGGGTAAAGCTTCCTGGAGAAGGGGGCATTTCTCATGAGCCATTAAAGCAGGGAGGATTTCTGAGTGCGGGCAGGAAGGAGAAGGTATTCCAGGAGGAGGGGGCAACCTAACGCGGCTACCAGGGAACATCTGAGGAGCAGGGCCCGAGGGATTTGTGGTGCGTGATGAGATGAGGCTGGAGTGTTCCAGCCCCAGGCTGCAGGGTTGGGACACACAGTCGGGAGCTACTGGGGGTGTTGAAGAGAGGAAGACGGGATGGGGACTGTGCTTCAGGAGAGGTGACTTGGCGGTGTGCATCCTTGGGCAGTGGGGAGAGGGACGGGGAGGAGGTGTTTCGACCGTTCAGTCCACAGGTCTATGATGGGACCCCGACAGCAGATGTCAGAGAGGCGGGGAGCCTGGAGGTTCCACGCTCTGGCCCTGTCATCCACAGGCTGCCCCAGGCATGGCTCTGAGTCCTGCTGTGTGACCTGGGGCAACTTACCTCGGTTCTCTGAGCCCCCGTTTCCTCAGCTGTGAAACGGGGATGCCCACCTACATCCTTAGACCTCTTAACTGCAAGCACAAGAAAGTGGGGGGCTCAGCTGAGAAGAAGTGTGCTGGAGAGAGACTGGGAGGCCGGCGATGCCAGTCAGGCCTGCTTAGCCAGGAACAGAGACCCCAGACCAGGCCCGGGGGTGGGCCGGTGAGAACCCCACCGCCCCAGGGCTGCTGCCACTGAGTGCGGGACGCATCTCGCCTGGGATCTTGGTGCTGACTATTTTTGGTGTATTGATGTCCAGGCCCACAAACATCTGGGGGAAGGGCTTAACATCAGACAAAACAAGTGACCGAGAAACAGGAGAGAGGGAAGCCTCTTGGCGGGGAGTTTTTGGGGGAGGCAGGGGTGCAGGCAGCCTGGGTCAGTTTTGAAAGGGGTCAGCGGTCCCCAGCAGAGGCAGGACGCGGGGAGGCCCGCACAGGCGGCCGGTGGAGGGACGAGTCCGCCAGCAAGGCAGAGCCTGCTATGTTAGGAGTCAGCGTGCGCAGATGAGAATCCCCACAAGACCCCAAAGACAGACACATCTCTAAACCTGTCTTCAAGCTCCAGAGGAGAGCTTTTAAAAATGTACTGGAGCTGCGTCTGGGGGATAAAAGCTCTTTTGTTTTCCTAACGCCAAGAACGTCTGAGTTATGGCATTTGCTTCTGGGAACCCCTTGGCGGGCGGAACAGTGAGGAGGCACCAGCCGAACCCAGAAATCAGAGTTCAGGGTCAGGACAGGCTTAATGAAAGATCAGGACGCCGGAGCGGGCCATGCGTCTTCCACTCTGGTGGACATGAAGCCAATCTCCCGGGAAGTCAATCAGGATTTGGGCTGGGAGGCCGGTCATTCCGACGGACTCAGCTTCAGGGGCGATTAGAGGGGAGTCGATGAGGAAATCCCCGCCAGCCCTGGCGCTCAGACACCCGGTTCCGGGGGCCCTGGGAGAGAGGCCATTCTCATCTGAGAAGTGCTTGCCTGGCCAGTGAGCATTAATATCCATTTGGGCCTCCATCAGAAGCAATCTTTTCCCAGGAACCTCTCGACATCTGTCAGGATCACCCCCCGCCACATGGAATCCGTCAGAAACTCAGTTTTTGTTTGGGAAGGAGCTGGCTGCCACCTCTCCAGCCCTGGATACCATCCATCCTCATTAGACTCCCTGTCCGAACTGCTAGGCCTTCAGCGCCAATGCCACCTGATCCTTCCTGGAGGACAGGGCACCTGGAACTGTGCCCCGAGACCCTGGGGCTGGACAGTCTCACCAGAGCCTGCTTCCCGGAGGGACCTGTGTGGGCAAGGGTGCAACTCAGCAGCCTGTCCCCAGGGCCACTTTACAGTTCATACACCCCTGCCCCCCACCCCCGGCATCACGCCAGCGCCCTTCAATCCCTGGAGGCAGGCAGGGCAGCCTCAGAGAAGGCCAGGGATGTGCCCGAGGTCACCCAGCAGCCTCCAGGCCTCCCACAGTGGCACACGCTCATTCTTGTGTTCAAACCTTGAATGCCTAAAGCAAGCCGGGGTCAGGGAGGTCAGCAGCGACGAGACAGCTCAGCGGGCTCCCAGCCTGGTGGACAGAAGGACAAGGAAGCCGACTTGTGCCAGGGATGGGGAGCCCCAGGGCCCAGAGGACAGACCCCTGTTCCAGTGTAGGGGGTGGGAGGAGTGAGGGGCAGGGAGACGGTATGGCTTGTTTGGGGGCCACGGTGGCTTGGTGCTACTGGCCTATCTGGTTTAAGGAGGTTTGGCGGCAGGGGAGGCGGCAGGTGGTCCTCAGGCCCCATCATCACCCCCATCACAGGTCCTGCCCTTCCGTGTCAGGAGTCCCAGGGGCAGGGACCACACCCTCCTGTGGCCATGTTAGCTCAGGGTGGGCACCGCACCTGCACACCCTCGGCACTCTCTAAATGCTTGCCAGATGATGGCTGTTGGCACCCTTTGGCTGTGTAGCTTTACCTCTGTTAAGTCTCGCTTTTCTCATCTGTAAAATGGGTACCATATAGAGCCGCTCTGCAGATGGGGACAAGTCAGAACCCTTCACAGGCTGCTCATCTGTGAGGAGTGAGCGGGGAGCGGGGCTGGGAGGGAGTCAGTGCTGAGCCCTGGGGGTTCCCTGTGAACACAGGATCTGGCTCTGCCTTGTAGCATCTTATAATCAAGGGGAGGCGGAGTGGTAAAAAGAAAGGCCAGATGTCCTTATTCAGAAGGTGCCGAGTGGGATGAAGCCAGCCATTGCCAGCCCACAGCCCCCACCCCCAGCGCCCCTGGCTGTGTGAGATGCCAGGGTCACGTCCCTTCTTGGAGGGCCCCTTGCTCATCTGTCCAGTGGGGCGGCCCTCTTGCCTGCCTTTCAGGGCCTGGGGAATGGGCTGGCTGTGCCCAGAACCTGCAGGTGGGCGGAAGGAGGGCCCCTGCTCAGCCTCAGTGCCTGGGCTCCCCGCCCCCACCCAGCCTCCCTGCCCTGCCGCACAGTCTTGTCCCCACTGCAATCTGCCGGGGGCAGTGCTGCCCCCCAGGCCTGACTGCCAAGCCCTCAACATTGCATAGTCACTGGCTGGGGTCACACACGTGAGGTCCAGATCAACATGTCCTTCAGCAGGGACTTGGAGTGGCCATGATAGGACCCCATACCTACCTGCTCCGCTCCCAGGCACAGCCAACGTCCCCCAACACCACGGTGCCAAGTGGCCCAAACCCTGTTCTTTGCAGCCCTGTTCTCCGCCAGGTGCTTCCTTTGTGCGAGGTCAGCCAGTTCACATCTGCCTGTAATTGGCTCCCCTGGAAAGGAGCCCCCACATCCCCCCACCTGAGCTCTTTAGGCCGGGAGGAAAATCCTGCCCTCACATGGAGAACGTCAGAGGAGCCCAACAGCAGGCTCAGGCTCAGGGAGGGATGAAGAGCTCCTGGGGCCTCCCCAGGTGCCAGCCTGGACCCCTGTGCCGGGGAGGCTGAGCAGCAGGACCTCGGGGTCCAACAGATGAGATGTTAGCTCCTTCCTACTTGGGCTGCAGCTGCGGCCGGCCCTCCTTGTCCCAGAGGCAGTGGTGGCAGGGGATCTGCTGTGACATTGGTGGGCCACAGTGTCCCCACGCTACTGCCTGGCCCACACCCTGCCTGGGGAATGGTCCTCAGAGCACACACACATTCATAATGGCGAGGTGACCGGTGACCGGGGACAACACCCTCACATTTCCTTCGTTCATCGTGCAAAGAAAGCGTGCCTCCGTGGGGAGCAGTTTGGGTTTTTCAAACTTTGAACAGAAACAGGACAATGCACGTGCAGGGCCCAGCCCCGCGCCCGCCGTGGCTCAGCACCCGAGAAACGGCAGCTTGGCAGTGCTGTGCCAAGAGCCGGCAGGCGCCGACTGCCAAGCCTGGGAATGACGGCAGGGCGCCAAGCCTGGGGGTACCGTTTTCAGTCAAAAACAAGGAGTGGGTCCGATTTCCTTCTGGGCTCAGCAGCTGGCTCTGCAGGGAGGGTGGTGATGTTGGTTAGGCCTACTGTGCGCCGTCCGTTTACGCATTGACTTGATTGCCTCTTCCCCACCGGCCCTGCGCGGGCTTATGCAGAGAGAAACAGACTCAGAAAGGTTCTGCAACCTGTCCGAGGTCACGTGGCCTGTGAGAGGTAGTCAGGATTTGAACTCAGCTCTGCCTTGTTCCTGACTGAGCCCAGAGGCCTCCCTGGGGGCACTGCCCAGAGGTGTCCAGAAAGGAGTTAAGGGAAAGCCAGACTCCTGGGAATGCCGCAGAGCCGCCCCAGGGCTGCCTTTGAAGGGCTGCCGTAGCTCACACATCCAAGTTCTTTGTTCTTTAAAAACATGCATCCTCCTCTGCCAGGACCCCTCTGCCCCCCTCCCAGAATCACCTGATCAGAAAGCCCGGGAGGCTGGGAGAGGCCACAGCTCCACAACCAAGACAGTCCTGTCTGTAACTGGTTTCTGCAGCAGTTTCATCACAGTCTAGGAAAAACCGCAGTTGCTGCTTCCAGGGGGCCGTTCTAAGGCATCGGAGACCCTCTCTCCCAGTCTCATAGGGTTTGGACCCACCCACCCCCCATTCCTTGGGTTTCAGCTCCTCTGCCCAGCTGGCAAGGCTCTGCTTAATGTTCCATTCAGCCAGGCATGTCCTCCTCCAGGGAGCCCTCCCAGATAACCACCTCCAACTGCCCCAGCAGAGGGACTCACTCCTTCTCAGGGTTCCCAGCAAGCTCTGTTGAATGCTGTGCACCAGCACATTTAATTCTCATCAAAACTTTGTGGGTTGAGGCTTTTATAATCCTAGCTTTACAGATGAGGAAACTGAAGCCTGGGGTTTGGAGGAATGTGCCAGGGTGGGAGCTGCTCTGCCCTATGGCTGCTGGCTTGTGCGTCGTCTCTCATGGGGCTGTGAGCTTTGAGGGCCAAGGTCATCCCTGTGAGCCCCGAGCACACACGGGGTGCTGTGCAGGAGCCCTTGTTTTGCAGGGGAGAAGCCACGTATCCTGTTGGCTGGAGTCTGGGTAGAACTCAGGTCTCCTGGGTGCCAGCCCAGGGAGCTCCCTGGGACTGAGCGTGCACTCTCATCCCCACTCCTCTGGCCATCTCAGCCCTGCGCACCTGGGTTGCCCACTCCTCCAAGCCTCAGTCTTCTCATCTGCCTAATGGGAGCACCAGTCGTCCCTCCAGGGCTGTGGCGGGGAAGGCCGTGGTCATCCTCTACGGCACTGGCCGGGTGCTAGGGTGACCACAGAGCCCAGCTCAGTGCTCAGGACGCTAGCTGCATGTTCTGGGCACAGTGGCAAAGCAGCAGCTGGTTGGTCAGGGTCTGTCTGCAGAGGCAGCCCTGGGCGGGATGCAACCTGCGGAGTGTAAGGCTGCAGCGGCCCAGAGGCATCTCCGCCTCCCTCGGTCCCCAGGCCCCATCTGACAACACAGGGCCGTCGGTGGCTGCTGCTGTCTTCCTTCCTCCGCGTCCAGAGCTGTCACTCCTTCCTCCATGTCCAGAGCCGTCACTCCTTCCTTTGAACCCGCCCAGCACCATCTGCAGGACCATGTGGGCCCAGCTCTCCCTTGGCAGAGCCCCTCTAAGCGGCACTTCCAAGGTGCGCCGGGCGGCGGGCTTCTGAGAATCCGCACCAAGAAAACACTCTCTGTCTGTCTTCCCACTCGTGGCATCTGCCCAAGAGGCTGCGGCTGCGGCGAGTGTTTCTACTCAATCGTTTTCCAGCCGGGACCCAAGAGAGACGCCCCCCCGGAGCTGGACCAATTCATATTTTGGCCTGAAAATGAATCAGTAATTTTTGTTTCCCTACCTTTTGCTCCCCGCCTCCATTTTGTTTTGTTTTGTTTTAAGACGAGGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTCGCTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTAAAGGCGCCTGCCACCACACCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTAGCCAGACTGGTCTCGAACTCCTGACCTCAAGTGATGTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACCGCGCCCAGACTCCCCACCCCTTTTTGCCTAGTGGGGATTCACGTTCGGTGGGTGGGGCAGAAAGAAGGGGAAGTGGACGCCTGGATCCTTTCCTTACTTCCTCCCTCTGTCCTCCCATCCCACTGGTCCTCGCTGTGTAATTAAAGCCCTCTGTGCTTGGCCACATCCAGGCATCTGGCGTCACCAAGGTCCAGTGTCGCTGAAGCTGTTTGCCAGAAATACAAAGCCACAGCTGCAGTTTATCCTGGGCTCAGAGTCAGACTAAACATTCCCCCACACGGGAAGCTGGGAGGACCCACCTGACGATCTGGGCCGTGCTCGGCACTTGCACTAGTCAGGCCACGTTGGGCTGTCATTGGCTCGAGGTCGGGGCAGGGTTTCCAAGCCCGAGATCCTAGCACAGGGCCCGGCACAGGCAGTCACTTGGGGTGTGAACCAAGAAATCAGGACAGCCCGTGGCAAAGGCTGTCAGTGGTTCCCAAACTGCGGGCGTACTCCGTGGGTCACTGGCAAAATCAACTGAATGGGTTTGATCAACATTATTTTTTCAATCAAATAGAGTGGAATAGAACATGATAGAAAATATCAGTGCACTAAGGCTGGGCGCGGTGGCTCACGCCTATAATCCCAGCACTTTGGGAGGCCAAGGTGGGTGGATCACAAGGTCAGGTGTTCAAGACCATCCTGGCCAAGATCGTGAAAGCCCGTCTCTACTAAAAATACAAAAAACTTAGCCGGGCATGGTGGCAGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGTGCCACCGCACTGCCTGGGTGACAGAGTAACACTCTGTGTCAAAAGAAAAAAGAAAATATCTATGCACGTCCTTCTGCATTAAGCTAAGTCTGGAGTCTGGATGCGTGTGCCTGTGTGGTGACGTCGGCTGCATCTCTCTGGGACATGGTCAGTCTGCAGGTCACTTCTTCAAGGCCAGACCACAGATGTGTCTTGGCGCCTTAAGAGCAGGTCCGCAATCCGTCACTGCACACGTTAAAAGTGCCCACGTTGGCCGACAGTTGCTGCAGTTTATTTTTTTATTTTTTTGAGACAGAGTCTCGCTCTTATCACTCAGGTTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCACGCCTCCTGGGTTCAAGTGATTATCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACCTGCCACTATGCCCGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGAGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAGCCACCGCTCCTGGCCAATTGCTGCAGTTTCTAAGTGGGCGTTGATTCGGGCTACCTGGACAGGAGTGCCGGCCGTATGTGGTTTCAGTGTCCTTCCTTGGGCAGAGGCAAAGGCAGGGGGCCAGGTGTGCTCACCCCAATTGATCGGCACCAAGGAGGAGCCCTGGGGGATGGTGGGGTCACTGTAACTGGCACCCAGACTGAGAGGGCAGTGGGAAAGAGGGGGCTGAGGACTGTGGGTGCAGGGACCAGCTCTTGGCACCAGAAGCCTGGGTAGAGGGGCACACTCAAGGCTACAGCCATCCTGGTCAGTGGACCTGCCACCAAGCACGAGTGTGGACATGGTGTCAGGACATTAGCCTTCAGGCGCTGGTGGCAAGGGTAGGTCCAGACTGTCGTGGGACTGAGGGCACAAGATGTAGTCGGCCCCCGCTTTTTGCTGCTCACGGCCGCCTGGCCGCTGGCCAGTGTCCGAGCTTCGGCCCTGTAAGGGTGGGGTGCCTGGGCTCGGGGAAAGGGTTTGGGGAGGGACATGGGCACGCAGAGAGCACGCAGCCCCCGAGCTGAGTCTCGACTGCCCATCATCCCATCAGCTGGGACGCAGGGGCAGGAACAGCCCCTCCTGCCACATCCTGAAGAGTCAGGGCAGGGCTGGGGTCTGGCGAGTTACGTAAATGGCAGCATTGGTTCCAGGCGTCCCAGTGGTGGGAGTGAGCGCTGGAGGCAGAGCCTGGGGGATCCTCTCGGAGGCTGTGGTCTGGGCTACCGGGGCTTCTTGCTCTCATTCTGGATGGTTCCTCTGAGCCTTTAGGAAGAGGCACAGCTGGGCACCTGTACATCAGCTCACCTGCCCCTGGTTGGGCACGCCCACTGGCTGCTGGGGTCTCCCCACTACCCGCACTGTGGCCTACTTCCCTGCATTTTCTGCCCCGCCCAGCAGGCTGACACAGGGCCCAGGACCCTGCCCCTCCTCCAGGGCCACCCTGCTGGGCAGACCTGTTCTCTCCCCAACCTCCAAGTCTGTCCTGCCTCTTGCACGGTTGGGGTCCCCTGAGCACGGGTGTCTCCTCTGTTCCTTTGCCCTAAGGTCCCCAAGGGCAGAACCGTGACCTCGTATCCACTGACTTGGCTTTTGCAGCTGGTGCCTGGCAGGAGATGCTCGGTGGAACATCTGTGTGAATGAGAGGCTGGGACAGACCCCTCGGGAGGGCTGGGGGAGGGTGGAGGCCAGAGTCTGGGAGAGGAGCAGAGGAGGCAGGAGCCCTCGCCCAGGCCTGGGCCTCAGTGCTGTGGCTAGCCACCCAGCTGGCACTTGCTGAACACCTACTATGTGCCAGGCCTGAGCTTATTCTCGGTGGATGGTCATAGCCTGGGAGGAAGGCGTGGCTGTGATCTCTGCTTTACAGACGTGGGTGCTGGGGCCTGGAGAGGTGTGGGGACTTGCCAGGGCTCTCTAAGGCAAAGCTGGGGCCCTGGAACCCAGATCCACAACCACTGGGCTCCCCTGCCTTCAGGAACTCCTTCACCACTGAGCATGCCCAGGTCCCCAGTCCCCAGGGCAGAGGCCCAGCCGACGGCCAATGCCAGCCAGGCATCCCAGGGGGCTTCGGGCCTGCCGGTCCCTCTAGCTCCCCTCCTCCTGCGGAAACAGGCTCCTACTGCCCGCTGCCTTCTCAGGGGAGTGCCTGAGCTTCTGCTAGGATTAGGCCTTTGAAAAGGTGCGTGCTCAGGGTCCCAATATGCGGCCATCAATACGGCTCTCCACCGCTCCTCAGATCTCCCTGAGCCTGATCGAATTTCCTTCCACCCCGAGCCGGTCACTCCTGAGGACTTTCAGATTTCAGAGCTGGGCCAGGTTTGAGGTAGCAAAGCACGAAAAAGGAGGTGTCATCTCCCTCCAGCTCCCTGACGTCAGAGCTGCCCAAACGCCGTGACGGACACGTCCCCGAGGGCTCAGAGCAGGGCTCAGAGCATTGGCAAACGCTCACGCGGCAGACGCCTCGGGTCAGACCGGGCATCCGGGCAGTTCCGAGCGACTGAAATCAGGCTGCTTAGTAATGAAACTGGCAGCTCGCCGGTGCCGCAGCCAGATCTCTAACACATCAGACTCTGACACAGATGGAGGCCGGCCGGGCCGCGGGCGCTGCCTCGGAGAATAAAGCAGGGAGAATAAAGGAGAATAAAGCTTGTTAAACAGAAAGAGGGCTGGGAGGGCTGGGGAGGCCGGCTGGGACGGATTGTCAGCGGATCCTGTAAATACTCCAGGCAGCTCTGGCCCGGGCCAGCGTGGTACTCATTTCAAAGCAATTTAACCGATGGGATTCCTGACTCCCAAATCAAGAATGTTATTAAAATGAACAACAGAGGCAGCCCAGGCGCTCGTTGGTACCCAAGTCACACCCCGCTGACTGTGGGCTCCTCGTCCTCCCCTGAGCCATCGCCTGGACTCCGGTTTCCCAGCACCCCGACCCCTGCCCCAGGCTTGTTTTGGGGAAGGGGAGCTTATTGAGGGACAGGGCTCTGGAGGCCAAGCCTGGGGTGTGTGGGGGGTGCTCTTGGTTCTTAAAAACTGGAGGATAGACTTGGTCAGTTTTGTTTTGACCTGGAAAAAGATTAAGACTCTGCCCCCCCTTTCTTTGACCATTGGGGAAACCGAAGCCCAGAGCAAAGTGCTGGAGATGCCCCCAAAGCCGGCTTTCCTCCACCCCACCGAGATTCCCTTTTTTTTTTTTCAGACAGTTTTGCTCTATCACCCAGGCTGGAGTGTAGTGGCATGATCTCGGCTCACTGCAACCTGCGCCTCCCGGGATCAAGCGATTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGGTGCATGCCACCAAGCCTGGCTAATTTTTATATTTTCAGTAGAGACGGGGTTTCCCCACGTTGACCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTTCTGGGATTACAGGCGGGAGTCACCGTGCCCGGCCCACCCCACTTTTTTTTTTTTTTTTTTTTTTTTGAGAGAGAGCCCAGGCTGGAGTACAGTGGCACGATCATAGCTCACTGCAGCTTTAACCTCCCGGGCTCAAGGGATCCTTCTGCCTCAGCCTCTCAAGTAGCTAGGATTACAGGCATCCACCATCACACCTGGCTAATTTTTAAATTTTTTGTAAAGATGGGGTCTCACTATGTTGTCTCGAACTCCTGGGCTCAGCCTTCCTTGCTGGGATTCCGGGCATGAGCCACCATGCCCGGCCTGGAATTCCTCCCTGAGGAGCCGTCTTGGGGGCCTGTGGGCATTTGGTTAATCCCACCTCGAGCCACCATGAGGCTCTGGAACCTCTGCTGTTTTCCAGGCCCCTGGCCAGGGGCCGTTGCGGGAAGTGGGCAACCAGGCCCCTGCCCTCCCGAGAGGGCAGGTTGGGAGCAGGGTGAGGGGAGTCTCTGGGCGGGGTGGGCCCAGGTGGGCTGCGAGTCCTGGGATGGTCGGTGCCAACGCCCCATCCCCATCTTCCCTTTGCAG
Seq C2 exon
GTGTTTCAGCGCCGGGAGGACGGCTCCGTGAACTTCTTCCGGGGCTGGGATGCGTACCGAGACGGCTTTGGCAGGCTCACCGGGGAGCACTGGCTAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000130720-FIBCD1:NM_032843:4
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.004 A=NA C2=0.014
Domain overlap (PFAM):
C1:
PF0014713=Fibrinogen_C=PU(50.0=93.5)
A:
NA
C2:
PF0014713=Fibrinogen_C=FE(37.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)