HsaINT0066559 @ hg19
Intron Retention
Gene
ENSG00000107164 | FUBP3
Description
far upstream element (FUSE) binding protein 3 [Source:HGNC Symbol;Acc:4005]
Coordinates
chr9:133470870-133485374:+
Coord C1 exon
chr9:133470870-133470975
Coord A exon
chr9:133470976-133485340
Coord C2 exon
chr9:133485341-133485374
Length
14365 bp
Sequences
Splice sites
5' ss Seq
GAGGTAAGT
5' ss Score
11.08
3' ss Seq
TCTCTTTCTCTTTGCCACAGTAG
3' ss Score
8
Exon sequences
Seq C1 exon
ATTGCTGCTAAAATTGATTCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGACCCCTCAGTATATGGATACGGAGTACAAAAACGGCCCTTGGATGATGGAG
Seq A exon
GTAAGTTGCCAGAAATATCTTTGCCTTTCAGGTGGTAGTGAACCTGCCAGTTAAGTTTGAATTTGTCAGCCATTACCTTAACGACTCTCTGAAGTGTCACTCTGTTGAGAAGAAAGGTTGAAGGGAAGTATTTAGGATGATTTTTCTCAGCAGTTCTTCAGCATTTGAGTTCCTATTTGCCTTGATAATACAGAAATCTTTTCGCTGGGCTCTGAGATAAAGACTTGGCCCCTGAGCATCAGCTTGGAAGTAATTTGACCTATTTGAGAATTTTGTTTGATTTAGCCTAACTCCCTTCTTCAGTGCGCATGGGAATTGAAGTTCCCACTTTCTCCACAGAAAAGCTACGATTTGGTGCATGGCTCTAGGGAAGCTGTGGCTACATCTTGACCTTAAAGAAAGAGAAGAATGGTGACCTTTCTGCAGTCTAGCTGCCAGCTTTTTCACCATTCCCATTTATGTCAGGCTTTTTCTAGAAGCATCCCTTTTCTTTAATTCGTTTATTTGTTGTTTTGTTGGCTGGTTTATATACCCTACTCCATCCCAAAAAGAATTTGAGAACACTTAGAAGTGCCAATCCCCAGCACTCTGGCAGAGTATCTATCAGATGTGTTTCTGTAGAGAGCTTGGACATCTTTATCATATTTTGTCTCCTGTTACTATAGAAGAGATAGTGAAGTACACTAGATTGACATGAATTTGCATGTAGTCGAGTGAGTCGGTGTCTTCTCTGTGTTCTTTTTCTGTCGCTATGTACCCAATCATTTATGTTTGTACATATTTCTGTGATGTATTATTATGTGAAAAATGAAGATGTAGAACAGTATGTATTATATAATCTTTTCTCCCAAAAGTGCATATTTTTATATACATAGAAAAATATAATTTGCCATGACTCATTTCTCTGGTCTCTAGGAATTCTTGTTTTTTTTTTTAATCCCTCCTTAGCGATGGGATCACACTCTGCTCAGGCTAGAGTGCAGTGGCGCCGTTGAACTCCTGGGCTCGAGTGATCCTCCCACCTCGGCTTCCCAAGTAGCTGGGACTACAGGCATGAGCCACCATGCCTCCTAGTACGTTTTTAAATCCTCCAGTTCATAGACTTGTTTGCAAATCTCAATGTCCTGAATAAACCCTATGTTAAGGTTCTTTTTAGTTAACTTAAGAGTTGAAGTATTTTATTTTATTTGTAATTTTTGTGAGTGCATAGGTGTATATATTTATGGGGTACATGAGATGTTTTGATGCAGGCCTGCAATGTGAAATAAGCACCTCGTGGAAAACGGGGGTATCCATCCCCTCAAGCATTTATCTTTTGAGTTACAAACAATCCAGTTACTCTCTTTATTTTAAAATGTACAATTAAGTTATTGTTGGCTATAGTCACCCTGTTGTGCTATCAAATAGTAGGTCTTATTCGTACCCATTAACCCCCCTCCCCCCTGAGTCCCCTTAGCCCCCTACTACCCTTCCCAGCCTCTGGTAACCATCCTTCTACTCTCTATGTCCATGAGTTCAACTGTTTTGATTTTTATATTGCATAAATAAGTGAGAACATGTAATTTTTGTCTTTCTCCGCCTGGCTTATTTCACTTAACATAATGATCTCCAGCTCCATCCATGTTGTTGCAAATGACTGGATCTCATTCTTTTTTATGGCTGAGTTGAAGTGTTTTTAAATAGACCCAAATAACACCTCCAAAAAGTTCTAGAGGACTGAACTTTAACCTCGTAAAGGTTAACCCTGCTTCAAGGGAAAGTTAGAAAGTTCATGTTGCTAAAGAAGTGATCTGGTAGCCTCTGTCAAAGAAAACCCAAGCCAAACCAAACAAACAGCTACACAGCCTTTGGAAATCTTTATTGCTAAGAAAAATGTGCCAGAATTCCGGCCGCTTGGTCTGCCTCTGCTTTTCTAAACTTTTCATCACGCCATCAGCAAGACTGTGAGCCTAGAAGGTGGCCAGGTAAACATGAACATCACTTCCCTTCACAGGATCTGCTTATTCACATTCTTTGTCTCTTAAGAGAGTGGCCCAGTGACCTTACCCCTACCAGAAGACAACTGACAAAAAGGGGCTGTGGCAGTCCCCAGACGCTGAGATCAACACAGAACTCAAATTCTACACGTGGAGAACAGCTTGGAGAAAAAAACAATATGTGTAATCCTGTTATTTAAACAGTGCTCAACAGAAGACACGATTAATTTTATCGAGCTGTAATACAGAATGTAAGAAGCCTGAGGGAAATTCCTTGTTCTTCAAATACAGCCTGTTGTTACCTAAGACCGGGTGTTCAGGGAGGATGAGAGATTCAGCACGACACAGAAACTTTCCTTCTTGCTATAGGAGGGCTTCATATTTAGAGGGAAGAAAAAGATAAACCATGGTCATTTTCTGTTTGTGAAGACTTATTCCCCAAAAGGTAGACATGGAAAAAAATATGGTTATCAAAACAAGTAAGTGAAAATACGCAATATAAATGAACCCGAGGTTTTAAGTGAGATTCTGGACCTACTGGGTGATCTTTGGCCAAGTCAGCTAACATCTGCCTGTGACCCAGTTCTCTTTATCAATACTGATAATCTCTTTATTAGTGCTAATTTCTTTCAAATGTATGTGCAATGGACTAATGGGAGAAAAATGTCTGCAAAATGCTAGAGGGTTTCATTTGCAAATATTTAGGTATTCCTTATGCAGAGGACGCAGCAGATACCTGCTCACTGCAAGCACAAGTTTTAACCCTTCAGCGCCAGGCAGTGGGTGAAAAAAACAAGGCTGAATTGTGAAATTGTTGTGAAAGGCTGAATGAGTTGTGAAATATATTGATCTCAATTTCTGGAAACACTGGGCCAAAGAGACACTGTCCGTTAGTGAGGTGTGTGCACAGAGGCAGACAACTTAGTTTTGTTTTTACGTTGCTGTCTCAAGAGGAACCAAAGTATGATTGCCTCGAAAAGGTAAAGAGGTTACTTTGCATTACAGCTTTCTGCTAAGGCAAAAATGCAGTTAATGCAATCATCCCTATTTGGCCTAGGGAATCACTAACACCAGTCAAATATAAAAAGATCACAGCGTACTATTTTGGATAAGTAGTTTAAATGGTTATCTTAGTTCCAGTGGCCCTGGGGTGGATTTTCTGTTTTGTGGTCATAAACACTTTGTAAATACACACGAATTTTTACAATCAAGTGAGTGCCATCCCCTTAAAATCTTCAGTGTGAGTCTAAAGAATTTTCCCCCAAAGGCTCCCACATCTAAAAACAGTGGCCATCTCCTCTTAGAATTCCTAGAGATGCCCAGCATGGTGGCTCACACCTGTAATCCCAGCTACCCAGGAGGCTGAGGTGGTGGGAAAGCTTGAGCCCAGACATTCGAGGCCAGCCTGGGCAACATAGCAAAACCGTATTTCCGAAAAATAAATAAGGCCGGGCACTGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCAAATCACGAGGTCAGGAGATTGAGACCATCCTGGCTGACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGATGTCATGGCACGCGCCTGTAGTCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGACGGAGGTTGCAGTGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAAAATACATATATACATATATAGATACACATATATACACACATATATACACATATATATAAGTATATGTGTGTGTGTGTGTGTGTGTGTGTATATATATATATATGTAAAGTTTTTTTTAATATGCTAGGCAGTGGAACAAGGGAAAGGATTTGTTCCTGATATAGAAAGGGATTTGGGTTAGTTGTGTTTCAGAGAGTGGCAGTTTTGAGCCACTTGTCAGAACGCTGTTCATGAGTCTGCTTAGAACCCAGAGCAGAATTTAGAGCTCAGTTTGAAAGCTTGCCTGAATGCCTGTCCGTGGGAAGAGCAGTCACCAGTCACTCCACCGCCCTCCAGCTTTGGATCAGGCCATTTTAACCTTCACTGTCTTCAATCTTGATACCCACATGTTCCAGCAGTCTTTGATATGCATCCTTGGCACCCCACCAGTTCAGGAATCTGCCTTCTGGTCTCAGTTGTGGCACCTTTTTCATCCAGTACTTCTCTCATGTTTCAACTGGAGCCTCTCCCTGCAGTCAGTCCAACCAGTTTCATTCCTCCAGTAACCAGGGAGGTGCAGATCTTGCAACCTGGCCATTGCCTGCCCTCCCGCTTGGCTCCTCCCGTGCACCTCCTGTGCTCCTCCTGTGTAGCAGCCTGGCTGCCTGTCTCCTCTCTCCCCTCACCCAGCTCTTAACCTGCCCAACTCCTGCTCAGCCAACTTCTTCCTAGAAACCTGTCCTCTTCCTTATCTTTTGACTTTCTTCGGGGCTCAGCCCACATGCCACCTAGCCTCTTGGTCTTCTCTCTACCTTTTCCTTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTCCCCCTCTTTTCCCTTTTTCACACACCCACCTGACCAGTGAATATTAAGTCATATCCTTCTCTGAATTTCTAAAGCAGTGTATTTGCCCTCTGCTCAGGGCAGACCTTCCTTCCGCGGTTACTGGGTCCCGCTGTGCACCTCTCCTAGCAGAGCCTACGTGATGTGGCCATAAAGACTGGCTTCATTTCCCATGGACTCTTCATGCTCAAGTTCTCCCATGTTTTTCATGCTCAAGTTCTCCCGTGTTTCCTACGATTTGCATTTTTAAATTTTGGGAAAAGTAAGTTCCAAATTTAAGACAATAGTATTAGCTAAGTGATTTAGAAGTGCGAATTTAAATGTAATCTAAATTAGAGGTTGGCAAGCTTTTCTTTCTTTTTTTTAAAGACAGGGTCTCACTCTTGCTGAGGCTGGAGTGCAGTGGGGCAGTCATGGTTCACTGCAGCCTCTATCCCCCAGGCTCAGGTGATCCTCCCACCTCAGCCTCCTGGGTAGCTGGGACTGCACTGCACCTGGCAACAAGCTTTTTTATAAAGGACCTGATAGTAAGCATTTTAGGGGCCAGGCATGGTGGCTTATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGTGGGAGGATTGCTTGCGTCCAGGAGTTTGAGACCAGCCTGGGCAATATAGCAAGACCCCATCTCTACAAAAAAATGAAAGAAGATTAGCTGGGTGTGGTGGTGCATGCCTGCAGCCCCAGCTACTCAGGAGGCTGAGGTGGGAGGATTGCCTGAGCCTGGGAGGTCAAGACCACAGTAAGCAGTGATCGCACCACTGCACTCCGCTTGGGTGACATAGTGATCTCAGAACAAACAAAAATAAATTTAAGCTTGCAGGCTATGTATCCCACCTACTAAGCTACGCTATTGGAGTTCAAAAACAGCTGTAGCATCTACATAAACAAAGAGCATGGCTGTGAGCCAATAAGATATTTCACCGAAACAGGCAGCTGGCCCTCAAGCTTAATTTGCCAGCCCTCAACTAAAATCAGCCTCATCAGTTGATGAAAACATTTTCTTCATCTTTAGTTAGGGAAGTATATAGAGAGTACCCCTCCCCCAGTTTCTTTAAACAAGTCTCCCGTCTCATGGTTCACTGTCCAACTGCCCTAACCACCTGAAACAAGTGCTTTCTCATGTTTGCCCAGAGCTGATGGACAGACAGAGAAGTCACTTCCCATTTGTCCCTCTGTATCTCTCCTGATCAAAGATCAAAGCCTTTCCAGTTTTCTTCCTCAGGAGCATTTTTAGGAGCTTTTTTAGTTGAACTAAGCAGGCCTCATACTCCCCCTGCATTCTGTGTAGTGGGTGGCACCAAAACCAGGACTTCAGGAGAGTACAGCACTGTCCTCACCACTGGGGTGGCGGGGGTAAGGCCATGCAAGGGGCTTTGAAACTATGCCTGCCTCTTCACTCAAAGACTCGTCTTTGCTATTTATGTAGCACCTTTTTTTTTGTCCTTTTTATTCTTTTTACTTCATGACCTGCTGAAGAACAGCACCTTTTATAGTACCACACTTTCTACTTTTGATAATACAGTTGTTCCCCATTTATTCATGACTTCGTTTTCCACGGTTTCAGTTACCCACGGTCAACCACTGCCGAAATTATTAAATGGAAATTTTAGAAATAATTCCTAATTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGTAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAATTAGCTGGGATTACAGGCGTGCGCCACCACAACTAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCACCTGCCTCGGCCTCCCAGAGGGCTGGGATTACAGGCGTGAGCCACCGCACCCAGCCAATTCCTAATTTTTAAATTGTACACCATTCTGAGTAGCATGTGTATCCACACTGTATACACTACCCACTCACCAATGTATAGGAAAAAATGTAGCGTATACAGGGTTCGGTACTCTCCATGGCTTCAGCCACCTACCAGGGGTCTTGGAACATATCCCTCATGGATGAGGGGGAACTGCTGTATTCTTACGGGGTAAAGGACGAATTCTTGGGCGTTCTGTCAAATGAATTATTTGCAGGAAGAGTGAAATAGACTATTTCTGTGATCCTTTCCAAGCTTTGTTTCAGTACTTGTGGCATAGGGCAAGGACAGAAAAGGAAGACAGGAGGGAGGAAAAGACGTTTGAAAATCCCAGACCTCAAGGAGAGACAGGAGATAGGAGGTACAAGTGCTAGCGGTGGTGAGAGCCATGATGCCCGGACCCCTGCCTGTGACCTGCACCCCAGGCAGGTGCTGAGGCCACCAGTCTCCACTCTGGAAAGAGGGAAGTGAATCTCAGAAGTGTTGATACTTTCCCTGAATGGGGGATGATGACAGATATTGGAGGGATGAAAAGCCAAGACCAAAACCTAGTTCCTGAGAGTAGGAGGGGTTAGGAGGAAGGTTTGCCTTTTGTGAAGAGGGAAGAGGTAAAGTGAGGCTGGGATGTGGTTGGGCAGTCATCATCAAGGGCAGATGAAGGCTTTCCAGGGGCGGTGGACATGGGCAGGCTTCCCAGGTTCCTTTTTCAGCTCCTTACCTCCTGTCTGCCCTCTTCCCTAAAATGGGCCTTTCTGAGAGTCACGTCTGCCCCTGAAGGTTATGCCCTTCCTGCCACGCCCCTTCTCCCGTTCCCCACTTTTGGTGTACAGTGGGCGGTCACCTGGGGTGGAAAAATCCCCAAGCAGTGGGGCCAGGCAAGAATTCTGAATGGAGAATCCCAAGGTAACAAAGGGTAGAGCCTTGGTAAGAAACAGTGAAGGGAGGCTGGGCATGGTAGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGCGGGAGGATCACCTGAGGTCAAGAGTTCAAGACCAGCCTGGCCAACATGGTAAAACCCAGTCTCTACTAAAAATACAAAAATTAGCTGGATGTGGTGGCGTGCACCTGTAGTCCCAGCTCTTCGGGAGGCTGAGGTGGGAGAATGGCCTGAACCCGGGAGGCAGAGGTTGCAGTGAGCTGAAACCGTGTCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCCAAAAAAAAAAAAAAAAAAAAACAAATAGTGAAGGGGACAGGGTCTGATTTTATCCAGTTGACAACTCCTGGCACAGGCTCTGTGCCCTACCCCCCTACCTCAGCCACCTGCATTTGTTTCTTCCTCCCTCCCTTCACCCATCTATGCATTTTAGGATTATAATTCAGAAGTGAGATGATACTCACATGGGTACATACATATGTGTAAGTTGGAAAAAGGCAGTGAGATTTTTCCCCTTGGCAAAGCATCATGTGACTGGTTGGTGGACAGTTGGCTTAGCCAGCTAGGTAAAATAGTATTCATTTTCCACAAAAATGAATGAGCTAAACCTGCAGCATCAATGTTGTGACAAAAATATAACTCGAGCTCATGTACAATGCCTGTTACATTCTTCGCAGCTGTTAATAGGGAAGAAAAGTAGTTGCCAAATTAAAAGAGGATTCATAGGTTTCCAGAGTTCAACTTGATGGTAGAACCTCTCTCGAATACAGTTTGGGAGTGTCACAAAACTAAACATGCACTTACGCACAGTCCACAACTGCACTGTTGGGCATTTATCCCCAAGAAAGGAAAATGTTCACACAAGAGCCTGTTCACATAGCAGCTTTATTCATAATAGTCCCAAACTGAAAACAGCCCACGTGTCCTTCAACTGATGAATGGTTCTGCTTGCGATACAGCCATACCGTGGAATATCACTCAGCGGTAAAACGGAACAAATGCTGAGTACATCCAGCAACTTGGATCAATCTCCAGGGAATTATGCCGAGTGCCAGAAACCAATCCCAAAAAACTACATACTGCATGATCCCCTTTATGTAACCTTTTGGGAACGGAGAACAGATTAGTGGTTGCCAGTGGTTAGGGATTGAGTCGGAGGAGAGGGGGTCACCTAAGATCACAGCTAGAAGGGAACCTGAAGCTTAAACTCCTTATTGTTGTAGATAAGGAAACCAGTGTCTCTGAAGAAGTAAGTGGTTTGACCAAGGCCAGATAGATACATGATAAGTGACAGAAGGGAGGTTGAACCTGGGTCTCTGTCTCATGTGCCATAATAGTATAGTACTTAAACATGTGGACTTCAGAGTCTGACAGATCAAGGTTTGAATCCCAGCTTTGCTAGTCATTAGCTGTTTGACCTTGGGCAAGTTCCTTAACGTCTCTGAGCCTGTGTTTCCTCATCTGTACAATGGACCTGATGATACCTGCCTCATCAGATTATCATGAGGGTTATATCATGTTATTTTCAAGCTTTAAGAAATACTACTCCCGGGCCTGGCATGGTTGCTCATGCTTGTAATCCCCTTTGGGAGGCCAAGGCAGACAGATCAACGAGGTCAGGAGATTGAAACCATCCTGGCCAACAAGGTGAAACCCCGCCTCTATTAAAATACAAAAAAATTAGCTGGGCATGGTGGTGCGCGCCTTTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGGGAATCACTTGAACCCAGGAGGTGGAGATTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGCGACAGAGCAAGACTCTGTCTCAAACAAAAAAAAAAAAAAAGAAAGAAATACCACTCCCAATGTGAGAAAAACTGTTTCCATCAGAACTAGTTAGTACAGACATATTAAAACACATATGTGACTGAAATGAAAGTTTTATGAAATACATTACCCTTATTATATATGGTACATTCTGTTTTCTATTTCATTTTTATTAATAAAGCTGGTTGTGACCCCCTATATTGATTTCATGACACTGGCGTAAATGAAAGTAAAGCTTAGGGCTATGAATATACTATCATAGAATTCTTTTTCCTCTTAGGCTCTTGAGGAGAAGGTGCAGGGCCCAACACGTCCCTGGAGGCTAGGGTAGGCCCCCTCATCTGTTGCCTTCTGCCTTCCCTGCTAGACTGTAAGCTCCCTGAGGGCAAAGGTGGCTTTGTTGACTGTTGTATCCTCAGGTCCTGTCACAGTGCTCAGCACCTGGAAGGCGCTGACTTGTGAGATGAAGAATGATCAAGAGAGTTAATAGCACAAAATTAAACAGTGATAAGTGTTGAAACCCACAAAATTAAAGGACAGGGGAAGATGAAGGGGTACAGAGTTTGCATGGGCACAGGCCCCTCGCCTGCATGCCACTCTGAGGGCTTGGGTGCAGTGTGATCGCACCTTCCTCTTCAGTAAGATGGGAATGGCAGTGACAGTAGCTGCCTCAAAGGTGGGTTCTTGTAGGACCAAGTGGGTTCACGCAGGTGAGGTGCCCAGGAAAGCACCTAGTGTGGCTGGGGGTGGTGGTCTTTCCACTCACAGAAGCTTACAGTAGACTACAAGTAAGAGTGATGTGATTGGCTGGGCACGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGCGGATCACCTGATGTCAGGAGTTTGAGACCAGCTTGGCCAACATGGTAAAACCCCATCTCTACTAAAAGTACAAAAATTAGCCAGGCATGGCGGCACACACCTGTAATCCTGGCTACTTGGTAGGCTGAAGCAGGAGAATCGCACGAACCCGGGAGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCGCTGCACTCCAGCCTGGGAGACAGAGCGAGACTCTGTCTCAAACAACAACAACAACAAAAAAGAGTGACATTATTGAGATAAACTTGAATTTACTTTCACTTTTTAAAAAATAATTTGCAAAATTAATAAATTATGCTTGCCAAAGGACTTTCAGCTGAACTCAGCATGTCAGTGTTTTGTGGCCCTGGAGCAAGAGTTGCTGCCTAGAACACAGGAAGCCTTTGTAGTGTCCCTGGGGGAAAAGCTTTCTAAAAACGCCCTGAATCCTCACCGCTAAGTGTGTGTTACTGACCTGAGCTGGGGTGTGGAAAGCCATTGGTCAGTCAGAGGAGACTGCAAATCCAAAGAAGAGGCAGAGGAGGGGGGATTGTTTTCAAAATCTAAAAAGGAAGATTTGGGTTATTTGTTTTTACAGTTATAAAAACTGGTATTCCTCTCTCCCCACCCCCCCCCAACAGACTCACTCACCTGCCTCTGGCCAGTGGTTCCGTGTGGGTGCCAGCCCGTGCTGGCTGTGCTGTCGTGAAGGAGGAATTGGCATTTTTGTTCCTTGTGCTGGGGTGGGAGTGGGGGTATAACTATTAAAGCTGATGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTAAAGTGGGCGGATCACCTGAGGTCGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACCCCGTCTCTACTAAAAATACAAAATTAGCCGGGCGTAGTGGCGCATGCCTGTAATCCCAGCTACTCGGGAAGCTGAGGTAGGAGAATCGCTTGAACCCAGGAGGCAGAGGTTGTGGTAAGCCGAGATCACGCCTTTGCACTCCAGCCTGGGCAAGAAGAGCGAGACTCTGTCTCAGGAAAAAAAAAAAGCTGATGTGTATTGCAAAGTTGCATGTATTTCCCAGTGCAGTTTTGTTTCTTTTGGAGGAGAAAAAAAAAATGAAATCTTTTTTTCTTCACTAATAGGGAAAAATGTGTCTGATCACCTTTTTTTGTGTTATTGTTTGTTTGATTGATTGATTTTTAAGATTGTTCTGCTCTGTCACCCAGGCTGGAGTGCAATGACACGATCCCAGCTCCCTGCAACTTCCACCTCCCCGGTTCATTGTGCATCAGCCTCCCGAGTAGCTGGGATTACAGATGTGCACCACCACACCCAGCTAATTTGTGTATTTTTTTTTTTTTTACTAGAGACAGGGTTTTGCCATGTTGGCCAGGCAGGTCTCGAACTCCTGGCCTCAAGTTATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGTGACAGCACCTGACCTGACCTCCTTTTTTTTTTTTTTTAAGATTATTATTAAAATTGGCAGAGTATTACTCTTCAGAAAGAATTTATGATATCGTAGGATGACTCACAGCCCAGGCAGTTCGTATTATATAGTGCACAAGGGAAACGAGAACTACACCTGTATATGCTGGAATTGCTCCAACGGGACCTTTAGAAGCAAGAAGATGCATTGTCAACCAGCACACACCATTAGTGGAAACAGGACTGATTTTACCCAGCATTTTTCCTTTTTTACAGGAAAATGAGTGTAGTTCCATTCAATTGAATATGATAGGTGTTCCCATCTGCCTCCTTAGTGTGACCCCTCCTCATTGCGAAGACTGAGGAGAGGTTCCTGTTCCTGGAGTTGGACATAGAAGTTGGCCATATGAGTACCCAGCGCCCCTGATCTAACTGCTGGTTTTCATTTTTAGGCAGCAAATGGGAATGTTCCGAAGGGAATGAAACTGCAATCACATGTTTCAGCCTTGGGTGGACTCCAGCATTTGCATGGAGGAGGGAGATGATTTATCCTTCCTAAGCATCTGCCAGCTCAGAGTTGACTCTGGACTTGAACCTGATTTCCTCTCAGTGATGCGGCTCTCAGCAGCCCATCTATCTGTGGGATGATAGTGTGAACATTTTCATCTCTGGTCATTATGAGTGCCTCCACCGTGGCTGGCAGGAATGGTGTCATGTGCGTGGCACCTGTAACACATACTTTGCCAACAAAAAGGAATTGCCATTTTTGTGATGAGCACAAAATTTCAAATGGCTTTTGAACAGGAGCCCTCTGAATATTCTTGTGAATCTCAGGAAGTTCTTTATGGTAGCACTGCCCTTTGTTTCTGTGGCTTTTCTGGCTGAGACAGAAATTTCTGAAGATCATCGGCCCTTTGACATCCTTTACCAAACAACGCAGTGGACCAGAACCCACGGTGCGGCCTCATTCCCCCAGCTGAGGAATGCTGAGCACCTCTCCTCTGTGTTCTCATCATTTCAAGACATTTTAGTTCTTCTGGCTTCAGTAGATTCTTTACCCACTAAGAGGGGAATTCTGATAGCAATCAGGGAAGCTGAGCTTGACCCATAAATAGGAACAGCTAACCAAGCTCACAGGTACTCTGTCGTTGACATTCTCCTTTGGTGTGTTTCTTTTCCTCCCCACTGCCCTATGTGGCCAACATACCTCCCTCAGGAATGTCTCAGCCCCAACATTATTCAGGGGCTGAGTCTGTGGTGAGGATTTCTTTCCTGACCTGGTGATTGTCCAGTTTTCATGCAGAATGGGAGTTGTGAACACTACCTGTTCCAAGCAAGAATGTTTGTTATATTCAAACAGATAGGCAAAGAGAAAATTTTAAGAGTCAGTAAAAAACAATTCTCTTATCCCTGAGATAAGCAGATTAATAGTGTCTAGTGTCAATATTTTGGCTGTAGACCATTATCTTGTTATTGATCCAGAAGAAATATGGTATTGACTTAGTAGCTTCGTTTGCTTTTTGCTAGCATTGTTTTGCTTTGCTTTTTCTTCTTTTTAAATGTCACGGTCTGCTTTTTTTCCTTTGTCTCTTTACTGTCCAGTCGGAGAATGACAGCAGTGAGTTTGAGCACAAGCAGAGCAGTTGGCTCCCTGTTCTGATTCAGATGGAGTTCAATTGTCAAACCATTTCATTCTCTGTCCTCAAGTGGGTGTAATCGATCCTTTGCGACTTAGCTCATGTCCTTAGAATAACTTTCCCCAAAGACGTATTTCTGAATGCCCTTTTTAGCATGTTGTAAGGTGCATTTGGTTCTTTGTGATATGTTTAGGATTTGTATTTTTTCATTGTCTGCTGACTGTGTTTCCTGAGCTGCATTTTCCAAAAGAGAAACACTACAGAATCATTTTTGCTGATGGCTGGTGAAGGAGAGACACTCATCAATAGCTGAAAGAGGAGAAACTGGAACAAAAAGTGTAGCTAAAGTGGTTTTGTGGGAATGTGATTACAGAGTTGGTTTTAATAATAAGAGGCTGTTTGGCACCGTTGTCTTTGTGAAATGGGCTTGAAAGGCAGTTGCTCATTCTTAGTGTCCGCTGCACATGGACTGCTCTGGTGGGTCCGTGACGAGGCCTGTGGAGGTAGGAGGCTGGATCCTCTCCTTCAGATGCTTATGGTCTTGGGGGTGGGGGGGCCGGCGAGGGGGGCACCAGGGGGCGTCTCCTCCCCCGTGGCCAGGAGGAGCATATGTGCGTGTTCCTCATGACTACAGCTGCTGTGGAGCAGTCCTTAACAATGCATCCAAGGAGGGTAAATCTTCTCATTTGTTTTTAAAAGAGAAAGAAGGATCTCTTTCCATCTTTACATTGAGTTTGGATCCAGAGCAGGAGGGAGGTAGGAAGTTAGAGGGATTTAGGCTAGCAGGATTTTCTCCCAGGCCTCACAGCATGTGGACACACAGATCAATTTCTTATCCTGTGTTCAGCTGGACACTGGGTTACAGACTGTGTTGATCAAGATGTCCCCTCCTGTTTCATATCATATAACGCATTCATTTCAGCCACTGAGCCTAAATTACTGTTTGCTTTCTTTCTGCCTTTCTTTTCCACCCCACCCGAAATGGTAAGAATGGTAAGGATGAAGTTAGTTTATCCGTGCTAATGCTTTGATTTTTTTTTTCTCTTTCTCTTTGCCACAG
Seq C2 exon
TAGGTAACCAGTTAGGGGCCTTGGTACATCAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000107164-FUBP3:NM_003934:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.020 A=NA C2=0.052
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)