HsaINT0095571 @ hg38
Intron Retention
Gene
ENSG00000134013 | LOXL2
Description
lysyl oxidase like 2 [Source:HGNC Symbol;Acc:HGNC:6666]
Coordinates
chr8:23340992-23360265:-
Coord C1 exon
chr8:23360090-23360265
Coord A exon
chr8:23341204-23360089
Coord C2 exon
chr8:23340992-23341203
Length
18886 bp
Sequences
Splice sites
5' ss Seq
GAGGCAAGT
5' ss Score
3.32
3' ss Seq
CCACGCCTCTTTCTTCCCAGAAC
3' ss Score
9.4
Exon sequences
Seq C1 exon
GGCCCATCTGGTTAGACAATCTCCACTGTACTGGCAACGAGGCGACCCTTGCAGCATGCACCTCCAATGGCTGGGGCGTCACTGACTGCAAGCACACGGAGGATGTCGGTGTGGTGTGCAGCGACAAAAGGATTCCTGGGTTCAAATTTGACAATTCGTTGATCAACCAGATAGAG
Seq A exon
GCAAGTCATGTGCTCTTGATGTTTCCTTCATGCAAACATTTTTCCTCTTCCATGCAACTCGCTTTTTGCGTATTGATTTCAAGAAGTGTGTGTGAGCAGGAAGGAGGGTACCTCACCCAATGGGATTAGATACAAGGGCAGTTTAGGGAAGGATTTCTGGAGAAGGGAATCCCATCCATGGGGAAAGGGCATTCCAGGCACAAGGAACAGCATGGGCAGAGGCACAGAGGTGTGAAGGTTGGGCTGGGGTAAGCAGAGCGTGATCTCAGGGAGAGTGCATCTGGGAGTAGGGTTAACTGAAGCTGGAAAGATGGGCATGAAACACCTCCGGTGCCATGCTCAGGAGCTTGCCCTTTGGGTGGGAAAATGTATTAGTTATCAATTGCTGCGTAACAAATTGCCCCCAGGTTTTGCAGCTGAAAAGAGTGAATCTTTATTATCTTGCACAGTTTGTGAGAGTCAGGAATTGAGGAAGGGCTTAGCTACTTGATTCTCCTCAGCGTCTCTCATGGAGTTGCACTCAGGCTGTCAATGGGGGCTGGAAGGTCCCCTCCCACGCAGGCTCTTATGGTTGTTGGCAGGCTGTGGTTCCTTGCTAGCTGTAGACTGCAGCCCTCTGTTCTTCTCTATGTGGCCTCTTCGTAGGCTGCCTGAGTGGCCTCAGGACATGGTGGTTGTCTTCCCTCAGAGTGAGTGAGGCAAAGGAGAGTGAGAGAAAGAACACAGGATGGAAGTCATGTTTCATAACTTAATCTTGGAAGTGATAGGCCATCATTTCTGCTGTATTCTATGGATCACACAGACTAACTCTGGTAGAGAGTGGGAGGAGATTACACAAATGTGTGACACCAGGTAGGGTTGCTGGGGCCATCTTGGAAGCTGGCTACCACTGGCCAATGTAGCTGAGGGTTGGAATCACTTTAAAAATGCAGGTACTGGGTCGGGCGCGGGGGCTTATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAAAGAAAAAAAAATAGCCAGACGTTGTTGTGGGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAAGCAGGAGAATGGCGTGAACCCAGGAGGCGGAGCTTGCACTGAGCTGAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTGTCTGAAAAAAAAAAAAAAAATGCAGGTACTGGGGCCTCCCCACTGACCCGCTGACTCAAAATATCCTGCTATGGGACTAGGTTATTTTTCTTTAAGCAGCCCCAGATTGATTCTGATGTTGCCAGACTGATAATTTCAGCATTTGAAAATCCACATTTATGGCTAAATTTCAGGGTTAGCTTTCCAGCAAATTCTTTATCCAAACAGTTAACACACACTTATTACATTACTCTTATGTGCAACATATGTGGGGCTTAGGACAGGAGGAATTGGCAGCTAACACTCCTGTCCTCAAGGAACATGTCAGATGCCACCCCCAAGGGATTATGGGATCTGCCCCAAATCCAGACCAAGGAACCTTCGCTGTGCTTCAGCCTCCAGCTGAACCCAGCACTAATGCAGAAGAAAGGTGACTTGAAATTGCCCTACTTGGGTTCCAGAGGAAGTTCTCCCAAGACTGTGGCCTTTACTGTCATGGCTCACACAGTCCTTCTCTCTCCATATATGTTCCCAAGCGTGCTGGGAATTTGCCCAACCCTGCTGTATAGCATAGGAAAGGATTTCCAGGCTTCTCTCAGCTGTGGAGGAGACTGCTTATGGTTGACACCTGTCAAATGCTGCTATTTTATTGAAGATAACTAGAGAGATTGTGATGGAGTTGATATACTTTCGTCAGTCTTCAGTCACTGATGACAGCTTTGCTTTCTTTACCATGAAGTTTATGATCTGACGGATGGGCTTGTCCAACCCAGTTTCACAAAATTTTCCATCTTCATTCCTTATAACCTCATGAGCAATAATTAGCCCCCACTTATGTGGATCTTATCTCTCCCATGAGATTGGAAGCTCCCAGAGGGCAGGGGCTATATCTTATGTATCATTGTATGCAATAGATAAATTCTAGGTACCTAATGGGAACAACATCTCCAACTCCCAAATTCTCTTCTCCCCAGAAATGTGAGCCAGAAATTATTATCCCCTTAGGTGGAGAATCTCCCAGGATAAAATATTAAGCTAAACAGCAATGAGAAGCACATGGAAGCAAATAATTTCTTCACAGCTTGTTCTGCCTAATAGGACCATGAGCTGATTTGTAACATCTTAGATGGGCCTCTGTTCAACCTGAACCTCAGGATAATCTACTTGGAGTGTCCAGTGAAGACCCAGCCTTCTTGGCATAAGAAAGTCATTGATCATTGATGGCTTGAAAAAAAAAAAATAAGACAGGCCAAAACATCAGTGAGCTTTGTGTTGAGAAAATGATGAGAAGGCTCATCTGCCATTAGGAAAAAAAAAATGATTTTGGAAAAAGGACTCTGAGTGGCACTTCATTAGATTAGATTAGATTACCCAAACAATTAAATTAACACACACTGTTTGTGGAATACCTACTAAGTGCCAGTTCCAATGCTTAATAATTCCAGGGCGAAATAAGATGGGTCATTTCAAAAGCAGAATTTTCATGGGGTGGAATAAACACAGAAAAGACTGAAAAAGGCCGGGCGCAGTGGCTCATGCCCGTAATTCCCAGCACTTGGGAGGCCAAGGTGGGTGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAAGATGGTGAAATCTCATCTCTACTAAAAATACAGAAATTAGCCAGGCATGGTGGTGGGTGCCTGTAATTTCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTGGAACCTGGGAGGCGGAGGTTGCAGTGAGCCGAGATCCTGCCATTGCGCTCCAGCCTGAGCCAACAACAGCGAGACTCCGTCTAAAAAAAAAAAAAGAAGACTGAAAAAAAATATGTTGGAGACGACTTTCTTACTGTGGAAGGGCTGAGATTCCATGATGGGAAAGCTTAGCCCCACCTTTATTCTGGGCATTTGTTGGGTACCTGCTGGTTTGGGATACCAGCAGGGAAAGAAAACATGGCCCTTGTCCTCCAGCCCTTACAACCTGCAAGACAAGATGTACGCCTTGGAGAAAGCTGGAGATCCTTCCAAGGCAAGGAGCATGGGCCCTCACAAATCTCCAGAAACCCAGAGAGGGCAACCTATGGAGATGTCTGGCTTAAAGGGCCAGGTGACATCCACAGCCTTACACACTCTGCATTTTCCTAGAAGGCCTCCCTCTGGCTGTCAGACAGATCAGGCTGGTGACCACGAGCCAGGGGGACGCTTTCTGGCCCAACCACAGAGACTTAGGGAACTTTCATTGATGATCAGTCCCCTGCAACTTCTTCCCTTTGGTAGCCGCTGAAAGTAGGTCATGAAAGGGCCTAGACCTCAGGATGTCTGGGGAGAACCTCCTTGAGTTGCCAGAAGATTCTTGCATCCAGGGCTTTGTGGCTAAGGCTCATGCTTACTGGCAGTGCTGGCCTGATGGGTAGAGAACCGCCTGGACCACCTACGTGGGATATTTATGGGATGCTGAGACGTTTCTCCAAAATACCTTCTGGAATGGCCTGTATCAGTAGCTGAAGTCATAGGATCATTCCTCCCAGCTAAAGAAATGCCTGCTATTAAATTTTTGTGGATAAGAGGAAGAGACATAGCTTGTGGACGTGCAGTTGGGTGAAGTCATGAACATACTGACTAATGATACCCAGGGTGAACTGCTGACTAATTTGTGTAAACAGAGTGGATGGTCTCTGATGGTGAGCCCTAGGGCTCTGTTCCGGCCTCCCCATCATGTATCAGGAATGTTCATGGAAATTAAAAGGTATACTGATAAAATCTATGGGAGATACAAAACTAGGAGAGATTGCTGGAGTATAAAATTATGGAATGAACTTTCAGAAAAACTGCTGTAGGTTGAAATAATGGGCCCAAGCTGTAACATATTAGGGATGAATAGAAGGTCCTATATCAAAGTTCATGGGGAAAAAAACAGTCACAGAGTGCAGACTTTAGGGAGAGTAACTGAAAAACTATTGATCTTTTTTTTTAAAAGGCCTGTTGGGTTGGCTCACATCTGTAATCCCAGCACTTTGGGTGGCAGAGGTGGGCAGATTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAATATGGCAAGACCGTGTCTCTACCAAATTAAAAAAATTAACGTGGCATGGTGGCATGTGCCTGTGGTCCCAGCTACCTGGGAGGCTGAGGTGGAAGGATTGATTGACCGTAGGAAGTGGAGGCTGCAGTGAGCCATGATGGTGCCACTGCATTCCAGCCTGGGTGACAACAGGGCGAGACCCTGTCTCAAAAAAAAAAAAAAAGAACAAATCTTTGAAGCGGCAGTGGTTGACTAAAAGCTCAGTATCAGCCAAGAGTATGATAGGGCTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGAATGTCAACTGCTTTACAGATAGAAGAATTATTTCCTTAAGCTCCTTGCCTTTTGGACCAGTCGCTGACTGCAGGGTTCAGTTCTGGATCCAGATCTTAACCAGGTCACCAGAGGAAAGGCCAACAGGATGGAGACAAATCTGGAAACCATATCATGAGGAAATGAAGTTTTTTGTCAAGAAAAGAGATATGGGGGGAGATGGTTCTCTTCAAATACTTGAACTACTACCATGCAGAAGAATGTTTAGAATGTATCCCAACTCCCGGCCGGATGCGGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGACAAATCATGTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAAGATGGTGAAACCCCGTCTCTACTAAAAATACAAATTAGCTGGGCATGGTGGCAGACGCCTGTAATCCCAGCTACTTGGGAGGTTGAGGTTGAACCCGGGAGAGGGAGGTTGCAGTGAGCCGAGATGGTGCCATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATTCCAACTCCCAGAGCCAAGGCGGAGAGGAGCGTGATGGAAGATAGATCTCAGGCTCAGTGGAAGCCCCACAGTAGATAGCTCTACCCTAAGTTAGTGGTGAGCTCCTTGTCAGTGGAGGAATTCAAGCACGAACTGGACAACATCCTGCCAGGAGTATTGTGGTCAGATGCCTACATGGGGAGGGAAGTGGGATTAAGTGATTGCCAAGTTTCAAGACCCTTGTTATTCAGTGTCTGGGAAAATGCACTCATCCCACATAGTGTGTGCCCAGCTGGATATTGACATCGCGCACCATGTGTAAACTGGCATCACATGTGTGTGAGAACACACACACACACACACAGAGAAGGGATGCCAACCAGCATGTGTATTGTGTGCTTGGGTTCTCTCTTTGCCTTTTCTCCAGCCCCTGATGGCCTTGACTTTGAAACCAGGTGCAGACTTTTCACTCTTCATATCAAAGTGTGAGAGTTAAAGCCCTCCCTCGACTTTCCCCAGTTTGGAAGGGGCAGATTCAAAAGCGGCCAGGAATGAAACGTCAGTGAATGATTTCTCTGTGTCTTGTGACCCTGGTCGTAGACCACTGGGCTAATGAATGTGATGAGGGCACCCGCGTCCCTTCCCATGCCTACTCTGTCTGCAAGGTTGTGGGCTGGGTTCTGTAACATTCACCCTCATTAACCCCTGGAGATTGGGGACAGGTCACAGATCATTACAGATGACTCTCACAACCCATGCTTCCTCCAGAGTGCACTGGAATTCCCAAAGCAGAGAATGGAAGAAAACTGCATCAGTCTAGACCAAATTCATCCTACTCTGGAATGCCAGAGGCATGAGTCACTAAGCCCTGGAGCCTGGCTGATGGAATTTCACTTAATGAGCTAACTGTGCTTCCCTGGACTCCTACAGCTGCTTGGAGCATCCTTGGGGGCTCCTGATAGTTTGTAAATTCCCCTCTAGAGGAGGAAAAAAAATCACACCTTCTTCATATAAGTGACCCCACCAAGGTTTGTACCCTAACCTGCCTTTTGACCAGCATCCAGAACAACTGGGCAAGTGTCGAGTGAGTTGAATTCAATCCCTTCCAGCTGTGACGGCCTGTAGTTCAGTGGCAATGGTTTCTTCATCAGAATGACATAGTGTGCATTCATCATTTACAAGGTAGTTTTAAATATTCTGTAGGGGAAAAAAATCAGATGATTTCTCTAAAAGTGCTTTGCAGACTTCGAAGTGCTGCCCTGGGTTAGTCCTACCACTGAATCACTCACTAGGCTTGGTTTATTTCATCCAGGAAATTAACCAGGCAGGTTCTCAGTTTTCCCCTTTTCTGATACAGGCTGTGCCATCATATCTTATTGTATATTCTCAGTTTCGGACTCCAGAATTGAAGGCAGAACCCCCGGGTTCCAGTCCCAGTGGAGACTGGAGCTCACAGCTGTTATGTCCAGTCACTGACCCTTCTTGGGCCTCTGGACACTGTCCTATAAAACAGAAGTTTGTCTGGATATAAAGAAAATCAGTTTTAGGTCAATCCTCAAAACTTTCTTAAAAGGAGGTAAGTAGGAGCAAATAAGCAAATGTGAAACACTCTTGGCTCCAAACGAACAGATCTCTTTTAAACCTGGCAAACAGAGCCCCAACCAAACCTCCCAGGATTTCAGAGCCTCTTAAATTGAGAGGCTTTGTTTCCTGCCTGTGGCGGGTAGACCAGTTGGAAAAAGCATTAGATAAGGAAAGATGACAAATCCAGATGCCCTACTCAGTAAACCTCTGCTCCCCGGCTGCTCCGCACGTTGCCCAGTCATGTGCTCACAGGAAGCCTTGTGGCTGGGCTGTGTGTCGTTAGATCAGGGAAGGTTTTCATCTTTTCTCTTTTCTTCACCCCATCCCTCCCCACCTCACCCCACCCCACTCCACCCCTCCCCACCCCACCCCACCTCCTTCCTTACCTATCCTTTAAAGGCTCTTTTGCAAAAAGCAATTCCATTGCCGGAACTGATTGGAAAATCCCCAGGCTGTGAGATTTAGGTGCTGCCTATCCCCTGAGTGACCTCCAAGCCTCAGTTTCCCGTTTGTGAAAGTGGGCAGCCCAGGAGGTCTTGAGGGGCCAACAGAGGGACGATGAGGACAGAACGAGGAGAAAGCCATTTCTTTCCACCCAAGGGGAGAACCTGGTCCCCCATTCTCTGCTCTCTCGCGTTCTTCTGGAAGGACGCTGAGACCTGAAAAAGCCCTTTCTTCTCATCTTAACCACAGAGACTGAGGCTGCTGTGAATTTTTTAAATGCCTTGGGTCCAGGTTTTTATTAGTCACAGTTAGCTGCCAAATGTTTCAGCATTGCCCTCCCAGCAGCAGCTCTGTCTGTCTGGGGGCGGCAGAGGGTGGAGGGCTTCAGCCTAAAAGGGAAAGGTCTCTAGAAGGACTTCTGAAAAGTCTGAACCCTTCCCAGCCAGGAATCTCATCCTTCTCCTGACTCCCACCAGAGAGGTTGCACTGGGTGGTTTGGGGAAAAAAGGGGGCCTATTTTCACCTCTGTGCAGTTTAGAAGATAGTGGTCCCCCCATGCCTAAATAGAGGCCCCATTCCCAGATGGTCACGGGGTAGCTGGATGGCCTCTCTCTGTAGGAGGAAGAGAAATGGTAGCCAGGGGGTAGTTTGTGCCGGACTTTTCAGCAAGGGCACAAGGACCCATGGTGGAGGCCCACAGCCTCTGAACTCTCAGTTTTGCTCAACTGTCTGGCTGGACAATTAGATGTAGCTCTCCTGGGTTTTGTCTCTCGCCCTTCTTGGGCAAGAGGATGTATAACATCCTGTCCAGGGCTGGGCACGGTGGCTCACGCCTGTATTCCCAGTACTTTGGGAGGCCAAGGTGGGGGGGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACGTGACGAGACCCCCATCTCTACTAAAAATACAAAAAATTAGTTGGGCATGGTGGTGTACACCTGTAGTCCCAGCTACTCGAGAATCGCTTGAACCCAGGAGGTAGAGGTTGCAGCCACTGCACTCCAGCCTGGGCAACAGAGCGAGACTCCATCTCAAAAAGAGAGAAAAAGATCCTGTCTAGCCCTCACATTCCGCGATTCTATTTACTAAGAGTCTATATGTAGCCAGGGCTTGCCAGCTACCAAAAGGGACACACAAAGCAAGTAGTTCTAAGGTGACCTATTTTCCCAACTGAAAATCTGAAATGCAAAAGGGTGTGTATGTGGATAACAGATGGGAACCTGGTTTCTGGCCCAGGTGTTGCAGATACAATGCTTTGAAAAGTATAAATACCATTATAACTCTGTGAGATGAAATAAACCAATACATAACATTCTATTTATTTGTTAGATTGCACACATGAATAAGGAGGCTTATAATTTGTTTTAGATGAAATAAATAAATGAACAGGATGTACTCAAACTTTGAAGAATGTGATTGGGTGCTTAATGGCATGGCAGTTTGGAGAAGAGAGAGGTGAATGAGGAAACCTGTGGGACAGTTGCTATCTGGAGGAAGTGGGGGCTTGAGCTGGGCTGGAGGAAGCCTCTCCCTGCCCTAGATGGGCAGGTCCGCTCTGCAGGGAGGTCTGGTGATGTGACTAGGGCAGAGTGGGCAGCGGTCAGCCTGGTTCTGCAATGAGCCTAAGTGGCTTATTTGAGTCACCTCAGCCATGCTGGGTGTCAGTGCCAAGGAATCCCCCGACCCCATCCCCAGGAGTCCGTTGCTAAGGATCTGTTTATTCATTCACTCAATACATTTTGATTCAGCACCAGACCCTACACTAGACATGAGGATAAAGGGAGTGATGGAACGGACCGTCTTGCCCATCCTGAGCTTACCATCCAGCAGTGGAGAAACAGTCTCATGCCTCATGACTGTGTTACCATGGTGATGATGGCTGTGAAGAGAACTACCAGATTCACCATGAGGTTGTGTGGTGGGTGGTCAGGCCTGACCAGGACAGGAGGAACTGCTGGGTCACAGGGGCTGGTTGTTGGAGCAGGTGTCCCGCCGACTTCCTGCTGACAGCAGGGCTTGCCCGTTCTCCAAAAAAGCAGCCTCTGTTACCTACCCAAGTGGCTGCCTGCTTGGAAAATGAAACACAGAGCATTCAGTTTTCCAGCAGTGTTACAAAGCTTTTGATTTATAGGAGGAAGACCCCAACAGACTACCGGCTCTTTCCTTTGGGGGTGTCAGCATGACCTCAGCTCTCCAGGCCTCCACTGGCCTCTATTGCCTAGAGCTGAGGAACAGAAATTGTTGAAATGCCTTTCCTCTGTCACTTTCTTCCATCAAGAAGTCACAGGCTAAAGAATGTTACCAGCAGCTTATTTTTTGTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGACCTCAGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCGTGCCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGCCCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGAACTGCCCGCCTCGGCCTCCCAAAGTGTTGAGATTACAGGTGCGTGCCACTGTGCCCAGTCCCCCAGCAGCCTCTTAAACTAAGAGTTTCTGATTGGATCATCAAAAGGGGATAATTACAACATAGCCAGACTCCTGGAGTACAGCATGCCTCATACTGTGTGCAGATAATACACACTTAGCCAAGCCATCTAACTGCGTGCTGAGGATCAGACGGCTTTTAATTCAGTTCAGTAACTATGTGTTGGTGTCAGATCTCAAGGGAAAAGGGGAGAGGGTGTTAGGGAGCTCAGGTGACAAAAGGATGCCTGGACAAAGCACAGATGTTCTCCTGTCTATCCATAAGTCACACAAGTCGTGCTTATGTTAGGAAGAGAGATGAGGACTGCATAACTTTATTTTGCATTAAACAAAGAATAAAAAGAGTCTTTATTAAAATGTTGGACTTGGGCACTCAGCATGTCTAGCTAAGCTAAACTCCTGTTGTTGGATTTTGAAAAAATCATTACTGGTTCCTTCCAAATATGTTTGGGGACCCACTCTGTGTCTGGCTATAGTGGGTCCTCAAACATGGTTGGAAGGAACCAGTAATAATTTCTTACTGTGTGGGTAATACAAAAATGAATAAGGCACAGTTTTGCCCTTAGGGGATTCACAGTCCAATTGAGTGGCAAAAGGATGTGGAAAAGTAAACCCTAGTGCAAGATAGTCAGTATAAGCCAAGAACTCAATGAGTCACCAGAATGCCAGTGCTGGAGGAATAAAGAAGAAATCAAACGTGTGGACGTCCTATTTGGGGGCAGGGGAGGGGGCTTCACAGAGATGCTGGTGCTGCCTCTCCTCCTCTAGATTAGGGACCACATGACAGCGAGGACCATGCCTATCTGTCCTTTTAGGGTCTCACACAGCACTTGGGACATGGTGGCACTGGACAAATATTTTTGAATGGATGAATAACATTTTCCCTGAGGATTGGCAGGATTCTGATAGATAGAAAGAAGGGACAGAGAATGGCAGGGTATGGGCCTAACGCGGAGGCACCACCAGGAAGATCTGAGCGAGACCCTTGAATGCACTGTGGTCAAAGAGGATGAACGGATGGGAGAAGAAACCAGAGGCGAGGAGACAGCACAGGCCTAGGTGAGATGACGACATTATCACGCCCTTCTTATGTTCCCATGATTCTCCTTGCACAGCTGACTGGGAATTGGGAGTGGGAATGGCAAGCTGATAGAAGGGCAAAGAAGGTCTGGCTAGGGCTTAATGGGCGCATGAGTGAAGAAGAGAGAGGGTCACGAAGGTCTGCAAAGCTAGAGGCAGGAGCATCCCTCAATGACTCGATGAAAAGAGGAAGAGTTGAGGGCATCTTGGATGTGTTTGGTCTCAGGTGCTGAGGAAGGTGTCAAGCTGGCAGTTGGGACATGGGTCTGTATCTGGGAGGCCACTGTTGTTGTTTTTTTGTTTGTTTGTTTTGTTTTTTTTGAGACGGAGTCTTGCTCTGTCGCCCAGGCTGGGGTGCAGTGTCGTGATCTCAGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCCGCCACCATGCCCAGCTAAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGGTAGCAGGGATGGTCTCGATCTCCTGGCCTCGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCGCACCCGGCCGAGGCCACTGTTTTGTTTTGTTTTGTTTCTTAGAAGATCTCGCTCTGTCACCCAGGCTGGAGTACAGTGGCACAATCCTAGTTCACTGCAGCCTCAAACTCCTGGGCTCAAGTGATTCTCCCACCTCAGCCTCCTGGGAGCTAGGACTATGGGCAGGTGCCACCGTGCCCAGCTAATTTTTTTTTTTGTTATTATACTTTAAGTTCTAGGGTACGTGTGCACAATGTGCAGGCCCGTTACATAGGTATACATGTGCCATGCTGGCCCGCTGCACCCATCAACCCATCATTTACATTAGGTATTTCTCCCAGTGCTATCCCTCCCCCCTCCCCCCACCCCACGACAGGCCCCGGTGTGTGATGTTCCCCTCCCTGTGTCCAACTGTTCTCATTGTTCAATTCCCACCTACGCGTGAGAACATGCGGTGTTTGGTTTTCTGTCCTTGTGATAGTTTGCTCAGAATGATGGTTTCCAGCTTCATCCATGTCCCTGCAAAGGACATGAACTCATCCTTTTTTACGGCTGCACAGTATTCCATGGTGTATATGTGCCACCTTTTCTTTCTTTTTTTTAATTATACTTTAAGTTCTAGGGTATATGTGCCACATTTTCTTAATCCAGTCTATCATTGAAGGACATTTGGGTTGGTTCCAAGTCTTTGCTATTGTGAATAGTGCTGCAGTAAACATACATGTGCAAGTGTCTTTATAGTAGCATGATTTATAATCCTTTGGGTATATACCCAGTAATGGGATCGCTGGTGCCCAGCTAATTTTTTAACTTTTTTTTTTTAGAAATGAGGTCTCATTCTGTTGCCTAGGCTGGTCTTGGACTCCTGGCCTCAAGCTATCCTCCTGCTTCAGTTTCTCAAAGCACGAGGATTATAGATGTGAGCCACCACACCCAGCCTGTTTTGTTTTTATTATTTATTTATTTATATTTTTTTGAAACGGAGTCTCAGTCTTTCGCCCAGGCTGGAGTGCAGTGGTGCAATCTTTGCTCACTGCAAACTCCGCCTCCTGGGTTCAAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGATGTCTGGCTAATTTTTTTTTGTATTTTTAGTAGAGACGAGGTTTCACCATGTTAGTCAGGCTGGTCTCGAACTCCTGAGCTCAAATAATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGTTCACAGGCATGAGCCACCGTGCCCCACCTATTTATTTATTTATTTTTGAGATAGAGTCTTGCTCTGTCACCTCAGCTGGAGTGTAGTGGCGCAATCTCGGCTCACTGCAACCCCCACCTCCCAGATTCAAGTGATTCTCTTGCCTCAGCCTCCTGAGTCGCTGGGATTACAGGCATGCACCACCATACCCAGCTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTTTAGTAGAGATAGGGTCTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCTGCTCACCTCAGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGTCACCATGCCCTGCCCTGTTTTGTTTTTAAATAGCCAAAGTAAGAAAGCTGCAGGCTCTGAGAGGAAGATGCAGGAACTTGCTGGTGGTTGTGGGAGGCTGCATGCGAGGTGAGCAGAGGCTGGCTAGAGTTGACACTCATGCATTCTCGTTGAGATGTTGGCATGATGTTATGTCTTCCCAGCATTGTCCTGCCACCCCTCCTCACCCTCAGGATGACTTCTCAGGTCAGAAAGCCTGGGCTGATATTAAATTATGACTTCTAGAACAGGGGGAAGGAGAACAACCACTGAGCTAAGACAACGTGCCTGGTGCTGAGAGTTTAGAGCGACTGTGATGTGGATTCATGTAGGCTGGCTTGCTTGACTTGCTTCTCCTTGTACCTTTCCCTGATGCAACTTCCAGCTAGACTTTCAAAATGGGTGATTTTTCCTCATTGGCGACAGCCCCAGACTATCGCATTCTGGAATTTGCAAGTCATGGACAGATGCTGCAAATATGAAATGTCATTTAGGCATAAACCTGAGAGTCAGAGCTCAGAGCTCCCTTCCTCTCCGGCTGACGTGACAAGTCCCTTGCATGGTCGTGCCTTGGTTTTCCCTTCTAGGAACGGGTGCAAATCACTCCCAGAGTCTCAGGCCCTGCCAGAGGATGTGATGAGCTCTGAGGACCACACATCCTGGAGTTTCTGTGTCTTTCTTGGAGGGAAGCTTTCTGGAGTCCTGGGTGCACTGTTGTCTCTGGCAAGAGGGATAGCATCAGGTTTTAGCTTGAATTTTAATATGTGCAGGGTGCTTGACCAGCTTCTGGCATTTGGGGCTGAATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTATTATTTTATTTATTTTATTTTATTTTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTATTTTAATTTTATTTTATTTTATTTTATTTTATTTTATTATTTTATTTTATTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTAGAGTGCAGTAGTGTGGTCTGAGCTCACTGCAACCTCCGCCTCCCAGGTTCACACCATTATCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCCCAATCTCCTGACCTCGTGATCCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGAGCCCGGCTGGGGCTGAATTTTAAACTAGCAAGTCTAGACTGCCTTTCATTTAAAAAAGAAAAAAAAGTGTGTGTATATTTTAATATTTCACACTTTCTTTTCACTTTTGGGGCTGAACTCCTGGGGCAAAATGTATCCTAACACTTGTGGTTATGGAAGGGATTCCACAGCAGTGAAGTAAAGAGAGAGGTTATGTGTGTGGGCGTGTTTTCTAAGAGGTCTAACTCAGTCTCCATGAGCTGGTTAGCTAGTGTGAGCACCGAATGTGTGCCCCAGAGGGCTTCCCTGCCTCCTCCCGCTGGCCTGAAGACAAGAATGCTGGGAGCCCAGCTCTCCCCTCACGTACACAATCCAGTCTGACTCACTGCCCCTCGACATGGGGTGCTGGGCTTCCAATGTGCACAGCACCAGCACCCTTCAGCTGGTTGAAGGGGACACCCAGAATTCTGAGCTCCAGGCCCTGCCCTGGGTGAGTCACCCTCAGTACCAGGCAATGTATTGGACACAGGCATGAGATGAGGACTGCTCAGAGACCAGTGGTCATTATGAGCCTGGAGCACGGGTTTGGGGGTCAGAACTCAATTTGCATACTTGTTTACCTACTTACTGGCTGTGTGAACTTGGATAACTTCCAAAAGCTTGCCAAGATTTATCATGTTTTTACCTCTAAACAGGTGGACCATGAGCCATCTTGAAAGCTGCCATGGGGATTGAATAATGGAGTGGATGTAAAGTTTTCTGTATGGAACCTAGCCTGCAATTAATTGGTGTTTGATAAATGATGCCCATAGCTGTCATTATTCAAAGCTGACACAGGGCGCTGTGGTTGGGGTGTAAGGAGGAAGCCCAGCAAGGCCCAAGGAGGGCAGAGACTGCATTTTGTTAAATGAATGCATACGGTAGATTTGAGCCTTAAAGACTGGAAAGGCTTTGGTTCTTTGGAGGGAGAAGAAGAGAAGACGGTCCAGTTTGAAGGAATGAGTGCGAATGGTGTCCTGACTGTTTTCCTAAGGCCTTGCAAGGAACACGATCCTTTCAGAATTTCCTCCACCACAAGACACATAAACAGATGCACACTTTATACATACAGAGACCCATGTGACATAGACACATACAGGGAGAGTGCACAGAGATCCACATGACACACCGGCACACACACACAACCCTGTCATGCATACATCATCATGCACACAGACACACAATCCCAGAGACACACAATCCCAGAGACACACACACAGAGACATATACAGGGGCTCATATGACACATGGACATGCAGACACTCAGAAACACACCATCATGCATATACCCCCGTGCACACACAGAGACACAGAGATACACACCACACACAGACCATCAAGCACACACCACCATGCACACACACAGACACAGAGATACACACCACACACACACAGACCATCAAGCACACACCACCATGCACATACACAGAGATGCATAAACACGTATGCAGTGAGTCGGTGGAAGAATGAGGATAATGACCCCCGGTGCTAGCCCTTTCTCTTCTCCAGGCTGCATTGCCTTCATCGTGGAGCCCCCGGGGCTCTCCCCACCAGCCCTATTCAGCGGAGGAAACTGTCCCGCATCATCGCAGGAACGAGAGCAAGCTCCCTTGGCGTTTGGGTTGGTGTGTGCTGGCCTCAGGCCCGCGTAGCTCTTTCCAGCGGGGTCTGCTGAGCTCCTCCAGCCAGGCCTTCTTCCTCCTCCTGTGGTGGCCAGGTGCTGGGGGTCACACCTTCCCTGCAGCGAGCCTGCACTGCTGCCCAACGCAGGGGAAAGGATCTGTGAACTGAAGGTCAGCCCGGGCCGCCTGCCCTGTGAAGTGCAGTCTTGATGCTAGGCAGTAACTTTCCTTCTGGGCATGACAGTTACACACTGGAATTCCAGCCCAGCCTCCCGAGGTGGGAAGAGACAGAAGAGGGCCGGCTTGTGGGCTGGGTTTAGACCTCAGGCCCTTTCTTGGCTCACCCCTGTCCACGTGTCTTGGTGGCACGGGTCCTGCGGCCTGAATGAGGGCTGTAAAGGATCCAGGATCCAGGCTGGAAGGCATAATCCTGCCCCTGGCAGCATTCCTTCTGCTGTGGTGGAAAGGAAACGGAGCCAAGTGCCATCACTCCAGGCCCACATACTTTCCACCGCCTTGCAGGACCTGAGAGTAGGGCCTGGCTGTGGACCCTGAAGCCCATGGCGAGGAGACGTGAATCCCTGGGCACCCAAAGAATGGTTCTGTTCAAACTCGTGGTTCATTTGCATCTCAGTTGGACAGGGCTGGGGCAGTCGGGGTGCTGGGTTCCTCCTGCCTTCCAGCCCGGCTTGGACCAGCCCCACCTCCCAGTCCCTGGCCCGCCCACAGTGTGTGTGTCTTCCACTGCACCTCGGGGTGGCCCTAGGGAGGGAACTGGAGTCAGCTGGTATTCTCATCTGTAAGGTGGGGATGGCAGTAGCTATCAACCACCTCATTACAGCGTGCGAGGGTTAAGTAGGAGAATGCAAGGAAGACACTTGACATAGGGCTGGGTACCTGGTGCATGCTTTGCGGTAGCTGTTGCTATTATATACTGCAATTCATGGTGTTTGTGGATCCATGTGAAGCTGGGGACAGTGAGGGGGCTGGAGGCATAAGTGGAATCAGTCCTGAATGGCCGAGAGCATCTTGCTCAATATTAGGGTATTACATAGACAAAGAGGAGCTAGTCAAGGGACAAGGTTAGATCTGTGTTTTAGAAAGAGCCAGCTGCAGTGCCTCATACCTGTAATTCCAGCACTTTGGGAGGCTGAGGTGGGAGGATGCCTTGAGGCCAGGAGTTCGAAACCAGCTTAGGCAACATAGTGAGACCTCGTCTCTGAAATATATTTTAAAATTAGCTGGGCGTGGTGATGTACACCTCTACTTCCAACTACTTGGGAGACTGAAACAGGAGGATCGGTTGAGCCCAGGATATGGAGACTGCAGTGAGCCCTGATCACACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACCCTGCCTCAAAAAAGAATAAAAATTAATTAATTAAAAGAAAAAAAAGGCCGGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGTGAGGCCAAGGCGGGCTGATCATGAGGTCAGGAAATCGAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCTACTAAAAATACAAACAATTGGCCGGGTGTGGTGGCGTGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGTACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAGAAAAAGAAAAAAGAGGCTCTTTGGTGGCTGGCCCTGTGGCAGACAGACGGAGGCAGGAACTCAGTCAGGGACTGTCGCAAGAGCTGGTGATGGCTGGCCATGAGTGATTTAGGGGGGAGCTTCCATAGAGTTTGGAGCCTGTTATGGCATGTCTTGGAAAGGCATTAAAAAGTGCCACTGTAACTCCAGGGAACCTCTTCTCCTCTCATTCAGCTTGGCCTCTTGAGGCCCCCTCTCCTGCCCGATCCCTGGGACTCAGGTCTAGGTGGTACAGGGATATTTCAGCTCCACGTCGAGGGAGGGGGAACACCCACGTGGCAGGGAGGCAGGCGCCTTCCTCTCGCCCATGCCCCTCCAGCCCTCCTCCACTTCCTCCCAAAGGGCCCTGCCAATGAATCTTTCCAACCCTGACCCCAGCCTCTGTCCTTTACTCCACAGATAGATGGGTGGGGTGGGTGTGGGAAGGGAACCCTCTAAGGGGCTCAAAGTGTCTCCTTTCCTTGCTGTGTCTCCTTTCCTTGCTGCAGCCAAATAGTTGTCCCCAACCCTACCTCCCTGATCCCTGCCAGGCAGGTGTGAGTCTCTGCACACAGCACGCTCAACACCAGGAATATCTGCTTCGTTTCTCTCTAAGCCCTGCTTCTTCTCTCAGGCCTCTCTAAGGATTTTTGAAGAGAGGAATGCCCACCCCTGGGGTATGAGGTAGTCTGCAGGGTGGCACCACCAGCTTCAGGACATCTGGGGGTCCTCTATCTGAAACTCAAGTTTTACTGAAAGATGAATCAGGGAGACACACACAGACACACTCACAGGCACATACACACATACTTTGGAGTGAAATGCAAAATCCGCATTCAAAGAACACTTTCTCTCCTGTGCATTTATTTCGAGGCCTGTGCAGGAGGAGGCTGCTGCCCTTTGCTCTCCAAGATCTTAGGTTCGGATGTAGGAGAAGCCCATGGGGTCTCTGAGTCTTTTCTGACTGTTCCAGGTCACCCCACTCCCTGTTGGGTCCTTTCAGCCTCACTATCTCCCATGCATAGCGCTTTCTAACTGCAGCTTGGGCCGTGTGCCCCTCGGGGTTGCCCAGAGCTCACTGCAGGGCCTGAGGGCACAGGCAGGCCCGCGGCAGGCCTGGCCCATAGTCGCTAAAGAAGTACTGGTTGCCTGGTGTCTCTGCAGCCAGGCCAGTAGGGTAACCCTCTCCTTCCACGCCTCTTTCTTCCCAG
Seq C2 exon
AACCTGAATATCCAGGTGGAGGACATTCGGATTCGAGCCATCCTCTCAACCTACCGCAAGCGCACCCCAGTGATGGAGGGCTACGTGGAGGTGAAGGAGGGCAAGACCTGGAAGCAGATCTGTGACAAGCACTGGACGGCCAAGAATTCCCGCGTGGTCTGCGGCATGTTTGGCTTCCCTGGGGAGAGGACATACAATACCAAAGTGTACAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000134013:ENST00000389131:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0053013=SRCR=PD(40.8=67.8)
A:
NA
C2:
PF0053013=SRCR=PU(48.1=71.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development