RnoINT0086055 @ rn6
Intron Retention
Gene
ENSRNOG00000016758 | Loxl2
Description
lysyl oxidase-like 2 [Source:RGD Symbol;Acc:1308435]
Coordinates
chr15:51315535-51332144:+
Coord C1 exon
chr15:51315535-51315549
Coord A exon
chr15:51315550-51331932
Coord C2 exon
chr15:51331933-51332144
Length
16383 bp
Sequences
Splice sites
5' ss Seq
GAGGTAAGT
5' ss Score
11.08
3' ss Seq
CCACATCTCCTTCTTCTTAGAGC
3' ss Score
7.44
Exon sequences
Seq C1 exon
ATCAACCAAATAGAG
Seq A exon
GTAAGTGCTATGCTTTATTCTTTTTACGCTATTGTGAGTATGGAACCCAGAACCCGTGTATACTCAGCCTCCACATGCCATCGACAGCATCTCCACTTGAATGTGTTCTCTTCTCCTTGTGTCTTGCCTGCTTGTTGCATACTAGGTATATGTGGGGATTCATACCAGCTGGATATGATGCATGGGCAAGTTGAAGGATCTCTGGAGAATGGATAGATATCATTACAGGGATGGATGTTTTGCCAGTACATATGTCTGTGTACTACACGTTGCTCAAGGAGGCCAGAAGAGAGCATTGGAACCCCTGGAACTGGAGTTACAGATGGTTGTGAGCTGCCATGTAGGTGCTGGGACTTGACCTAGTCTTCTAGAAGAGTAACTAGTGCTCTTAACTGCTGAACCATCTCTTTAGCCTCTGAATTTGCTTTTGAAAAGAGACTTAAAATTGTCCTCCATTTAGGCTCCAGATGTCCCCAGACTGTGCCCCAGTTGTTATCTTTCCATGACTTCTACTGCCCTGCTTCTGTCTTCTGAACCCCCAGAGCACACAGCACATGCTAGAATTGGGTCCAGTCTATGTGGAGCATGGAATGAGTTCCCATCCTTCCCTCGGCTGGAGCTTGAGACCACTTGCTAGTGATCATCTTCAAACATGTTCACTCATTCATGTAACAAGAGCACCATAGAGTCTATGCAATTCAGGGACTGAATACCACTAACCAAGCTTTGTTTTTCCATGGAACTGACACTGAGGAGTATGGGCTTATGCAACCCAGTGTCCCAGAACTCCATGCCCACTCTATATCCTCAAAGGAAACAGCACCCACATGTACGTGTTTCTGCTTTCTAATGAGACCAGAAGCTCCTAGAGGGTAGGTGCTACATCTTAATCATGGTTGCATCCAACACACAGAGTTCTAGGTACCACATGTGAACAGATTCCAACTTCTGCACTACCTTTTCCCTAGCGATGCATACCAGAGATTATTGTTCCCTTAGGCAGAAAAGCACCCAAAGTCAAGCATTAAACTATACCCTGAAGAGAAGCACTCAGAGCAGACATCCTTTCATAGCACTGACTTGTCTCGGCAGACATTGAGCTTATTGATGACATCCTCAGTGGCTTTGTGTTCAACTAGAAGCTCAGAACTATCCACGCAGAGTGTTGAGAGAACAGAGGTCCAGGCTTTGTAGCTAAGAAAATGTTAATGGTGCAAATAGAAAGAAACAGTCCCAAAAAATATCAGCCAGTTTGGGGTTATGAGAGAATAAGATTTACATGCTATCAGCAAAATAACAACAGCAATAAATAATCCTGGAAAGGGAACTCTGTGAGCTGACCTCCTACAGGGCTTTGCACATGCTAGCCATTCTACCAACTGAGCTGCATCCTCATCCGTGAGCCACGTTACATAGAAAACAGAACCCCACTGAAATGGAAGAGGCTTAGACAATCTGGGGCAAAAATGCGGGAAAGAACTTCCTTATTCTGGAAGTGTGCTGGCCAAGCATAGTTCTCAGCTTTGACATTTGTTGGAGGAAACAACATTCATCATGATCTGAGGATTCCCATGAGAAAAAAACACAATCTTTAGTTGCTGGAAAGACAGAGCATGTGTCGTGAGGAATGCTGGATCACCGTGCCGAAGCCAAGTGCACAGATTCTGGTGACTTTGCTGTCACCTAGAGGGTTATAGAGCAGACATATTATGACAGACTAGATGGCAGGTATGGCTTTTGAACCGCATGCTTTCCTAAAAGATCTCCTTTCATACAGACCAGTTTGGTGACACAAACCAGGAGGAGGCTACCTTTTCTAGCCACAGACACACAGGAACAAACCCTCAGTCAGTGAGCTGCCCTCTGGGATCTCCCTTCCGTGTCCAGTGAAAGTAGGTCATGTTGGCCCTAGATTCAAGATGCCTAAAGAGAACTGTTGGGTTGCAAGAAGATTCCTACGTGCTGGTTTTCATGGTTAAATCTCAAGCTTATGTGTAGCCCTGGTCTGATCAGGGGCCGCCCAGACCACCTACACAGGATGTTTGTGGGATGCTGAGAAGTTTCCCCAAAATGCCTCATGTCAGTAGCTGAAGTCATGGGAGCATTCCTCTCTGCTAAAGAAATGACCCATATTAAATCATTGTGGGTGAGTGAGTGAGCCATAGCTTTGGTGGATATGCAGTTAGATGGTATTGTTGGACATTAAGGATTCCCTGGAGAGCTGGTGACTAATTTTGTATGAGCGTAGTGAATGGTCTCTAGTGATGTGCCCTGTGCCTCTGTTCCTGTCTATATATGAAGCATGAGGAGTCTGCCTGGAAACAAAAATGTGGAATGAAAATATACTAAAAGCTATCAAACTAAGAGGGATTGCTGTGATGTAGGAAATGAAGATTTAGGAAGACTGCACTGGTTTGAAATAATAGGTCGCAAACGTGACAGTTATCTACTTAAAATGTAAGGTGTGTTATATTTTGAGGTCAAAAGGACTTTGACAATATCCAGGTGAAAGAAATGGGGCACAAGAGTACAATCACAGAGGAGTGAATGAAAGGCACTGATTTTTTAATCCCTGCAAGCGCTGTGTCCCTGAACTCACTGACTCAGTTCCGGGTCCATCTCTTAACCAGGTCACCCACAGGAGAGGCCAAGAGACATGTCTGGAAACCATATCTTAGGAGGAAATGCAGAATTTCTGTCAAGAAGAGATACTGGGGGAGGCTCTGTCAGTTCTTTTCAAATATTTAGCGTGCTACCATGGAGACAAATGTTTACAGTTTGTTCCAACTCCCAGAGAAGACTTAAGACAGAGAGGCAGATGGTGGATGAGATGCAGGCTTCAGCAGAGGCAGTCCCCTGCCCCTAGACTCATCTTCTGTGTGTACTGAGCTTCTTGTTGATGGAGGAGTTCAAGCAGAAACTCTCTGCCCCCTGCCAGAAATTTTGTAATCAGATTCCAAATGGGGAAGGGGCTTAGACTATGTGATTACAAAACTCTAAGCTCCCCTGTCAATCAGAAGCTATGGATGGGCATTTACCTCATGTTAGAGGCATCTACAAGCTGAACAGGCCTCACTGGTGTATATGTGTGTCATCGTGTGCAGAGAAGCGATGAGAAGACTTAAGACAGAGAGGCAGATGGTGGATGAGATGCAGGCTTCAGCAGAGGCAGTCCCCTGCCCCTAGACTCATCTTCTGTGTGTACTGAGCTTCTTGTTGATGGAGGAGTTCAAGCAGAAACTCTCTGCCCCCTGCCAGAAATTTTGTAATCAGATTCCAAATGGGGAAGGGGCTTAGACTATGTGATTACAAAACTCTAAGCTCCCCTGTCAATCAGAAGCTATGGATGGGCATTTACCTCATGTTAGAGGCATCTACAAGCTGAACAGGCCTCACTGGTGTATATGTGTGTCATCGTGTGCAGAGAAGCGATGGCAAACAGTATGTGTGTTGTGTGTTCAGGCCTCTCTTGGCCTCTTCTCTGGCACCTCACCACCTTGACTTTAAAGCTAGCTATTGGCCTTACAGACTCACTGGTTGCCTGGAGGTCAGAAACTGATCTCAATATTATAGATGACCCCCCACAGAATTGCATCTCTATGAGAATGCTTCAGATATCCCCCAAGAAGAGAATGGAAGAAAACTGCACCAGTTCAGATGAGATTTCCTCAGCAATGAATGTCAGAAGTATGCCTTGAGAACTAGGAGTTGCTAGCTCCAACCCTAAGAACTCAACAGTTAGGGTTAGGGTTAGGGTTAGGGCTAGGCTAGGGCTGGGGTTAGGGGTTAAGCTTAGGGTTAAGAGTTAGGGCTAGAGCTTAGGGTTAAGAGTTAGGGCTAGGGGGTTAGGGTTAAGGCTAGGGTTAGGGTTAGCAAACTCTAATTCTTACTTTAGGAAAGATAGTACTGAAGCAGATCTTACTTGTCTTCCCCAGACTTCTCTGTCAGGTTGAGACACCTTTGTGACTTCTTGATAGTGAATTTCTTTTCAATGGAGGAGAAAACAGCCCCTTACTTACAAAAAGACTCCAAAGGAGGAGTCTCCAGAGTTGATCCTAAGGGCCTTGATGACTGTAGCCAGAACAATCCAGGATAAAACTGTCAGTATCACAGAAGGAACACCCATTCAGAGCCTGCCCCACATGTGGCCCATACATATACAGCCATCCAATTAGACAAGATGGATGAAGCAAAGAAGTGCAGGCTGACAGGAGCCGGATGTAGATCGCTCCTGAGAGATACAGCCAGAATACAGCAAATACAGAGGCGAATGCCAGCAGCAAACCACTGAACTGAGAATAGGACCCCCGTTGAAGGAATCAGAGAAAGAACTGGAAGAGCTTGAAGGGGCTCGAGACCCCATATGTACAACAATGCCAAGCAACCAGAGCTTCCAGGGACTAAGCCACTACCTAAAGACTATACATGGACTGACCCTGGACTCTGACCTCATAGGTAGCAATGAATATCCTAGTAAGAGCACCAGTGGAAGGGGAAGCCCTGGGTCCTGCTAAGACTGAACCCCCAGTGAACTAGACTGTTGGGGGGAGGGCGGCAATGGGGGGAGGATGGGGAGGGGAACACTGATAAGAAAGGGGAGGGGAGGGGGAAACCGGGAAAGGGAATAACACTCAAAATGTATATAAGAAATACTCAAGTTAATAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAGGAAATCGGCTCGAGGCCATCGCTGGCCATACAATGAAAAAAAAAACTGTCAGTATCTATGGTAACAGTGGGTTTCTGTCATTGGCAAGGTTGTTCTAAGTACCTGGGGGAATCAGATGTGTCAATATAAAAGAAAGCCTTATAGACTATGAAGTACTTATAAAGAACGAGGTGACCAAAGTTCATGGGTTGGGAGGAGGATTCCAGAGGTGCGAGTCACTAAGTCTGGAGCAGCTGGTAGAATTTCTCTTACACTGTCAGTTTTCTTGAACACCTGTGTTTACTCTGGACATCCTCTGGGGCAATGAAAGACTATACAATCATTTTACTACAGAAACTCACTGACTGTGTGTCTATCCTCCTTTCCAACACAGACTGTAGCATCTCAGCTTACTGTAGATCCTCAGCTTCTGAACCAATAGCTGAAAGCATGAATTTCTAAGTCTTATGGAGACAATGGCTGACCTCTGATATCACCTGATAGCACATTAAAATATCCATTTGGCTGACTATAGAGACAAATGAGTCATGGATCAATCATTAAAATGTTTTTAAAATAAGGTAGGTGGGAGCAAAGAATGACTTGTGCAATACAGATATTTTTAAATACAGAAAACAGAGCCCCCAGCAAACTTCTCAGGATATCAGAGCCTCTTAAACCAGGACACTTTGTTTCCTGTCTGTGGTAGCTGGAAAAAGCATTAGATAAGGAGAGATGGCAAATCCAGTTGTCCTCTGGAGAAACCCTGCAGCTGGTACGAGTTCCTAGATCACATGCTTGGTCCTACAAGGCTTCTGCTGGGGCCTGTTAGATCAAGAAATGTGTGAGTCTGCAGTGGTCACCGCCTGCCTTCCTTTCTACATATTTCTTAAGCAAACAAGAGGTTAGANNNNNNNNNNNNNNNNNNNNNNNNNTGCCTAACATTCATAAAGCCCAGGGTTGACCCCCCCCAGCACCACATAAAACTGTATGGTGGTAACCCTGTGTGCAGGACAGACTAGAAATGCCTAGGCATGGTGTCTACTCTTTGAGGGATTCCCTGAACCTCAGGATCATCACTAAAGACAGTAGGCAGCCCAGGATATCCTCAGTTGTCAACAGAGGGATGCGGCAGAACCAGAAGGCCATTTATGTCCCTTGACTCGACAGGCTAACATTCTTCTGGAAAGATGGTGGGGCCTGAAAAAATCACTTTATTCCTGTAACCACAGGGACTGGGCAATGAATCCAGGTTTTTATTTGTCACTGTCCCTGCCAGATGTTTCCATGTCTCCCTCCCAACCACAGCCTTATCTGCCTGCATCTGGAAAAAGGTCTCTGGAGAGACTTTCTGCAAAGGGGCACTTCCCGGCTGGGTAGTTTTATTGTCTCTGATCTCAGCTCTAGGGCAGAGGGGCAGATTGTGTTTAAGAAAAGGGTATAGTTTGGAAGATTCCATATAACCTCCCAGCTGGTTTTGGGAGAGCTGAGCAACTTCCCTCCTGCAAAAGAGAGAAGTGACAACAGTGCTTTGTGCCTAACTCTTAGGAGCTGAGTAGAAAGGGTTAAGCAGCGCATCCTCTGAGGGCTGAACTGGCTGATCAGAGGTGGTTCTCTGGGGTATCTTTCTTTTCCACCATTCTGTGAGCATACATAGGAAGACATAGAGGGCCTTACTCTGTGTTCATAATCTGTGCTCTATTCACCGAGAACCTCTATGTAGTGGGGACTATTGGCTACCATAAGGTATACAAGATAATAAGCTATAAGGTACCCTACTTTTTTTTTCAATCGAAAATAGGTCACCATGTCTGAAAAGCAGAGGGTGTTTATGTGGCAAATGGAACCAAATATTTGAAATCATGCAAAACCCAGCAAATCTGGAAATTTGGTTCTGGTGGGTTGCTCATGCAGCCCTTTGCAAAGCATTGAGACTGCTAGAAAAAGCCATGAGGTGAAACAAACAAACAGCATTGTAGTCACTAGACTGTGCGAGCATTATACTCTAGATGTAATGAACACATGAACAGTATGTACTCTAACTTTGAGCACTGTGGATTGGACTAGTATATTGAATGGAGGTTTGAAGAAGAAATGAATGGGAGAGGTGGTGGCGAGGTTTGCATCTGTGGATAGGCTAAACTGGGTGGGAGAAAGCCACCCAGATTCTGTGTATGAAGGCGCTATTCTCTGAGCCTGTAGGGTAGCCTAATGACAAGAGTATAGCACAGCTTGTAGAGTCCAGACTGGCTCTGCCACGTGCCCTAAAGTCCAGGTACATGAACCATGCTGGAAGATGAATGCTGAATCTCTCCCTTCATCCCCATAAGGCTATTGTAACAAGGATCTATCAGCTCATTCATTCTCTGAGCCCTAGGCTGGGCACAAGAATGAAAGGGATTGATGGATAGATAGTCTTGCTCTTCTTGGGCTTACTGTCTAGCAGTAGAGGAAGACCATTTCAGAACCCATTGCTGTGTTACCATGATGATGATTGCTGTATATAGTCAAAGGCCCAGAATAGGACTTGCTGAATCCAAGACCTTAGAACCCAGGCAAGCCCAGAGAAGCTGCTGGGACACAAGGGGTTGGTGGCTAGAGCAGGTGTCTCACCAGCTTCCTGCCTGCAGTAGGGCTGGCCTACTCTCTGAAGAAGCCTCTGTTACCCTACACATTCCTCCAGGCTGGAAAAATGAAAGCATTTTCCAGCAGCGGTGCAGAGCGCCTGATTTATAGGAGGTCCAGCCAAACAGCCAGCTTGTTTCTCTAGTGGCGTCAGTGTGAGTTCAGCTCTCCACACAGTCCCGGCTGCATCCCCTTCACTACCAGTTCAGTCCAGTTCAGAGCTGAGCAATGGAAACCACAGAGCATGGCCTGGGATCTCAGCTACTTGGCAGACTGAGGTAGGAGGATTATAAATTCAAAGTGTTCCTGGGCTACAGAGTGAGTCAAAAGCTGGCCTAGGCAACTTCGTGACACCCTGATTCTCAAGAAGTAAAAGAAGACTAAAGATATAGGTCAGTGGTGAAGCATTTGCTCAGTGGGTCTGATGTGCTAGACTCAATCCCCTAGCACTGCAAAATGCGAGAGAAAGAAAATCATAGGCAGGGGACATATGCTTGTAATCCCTAGTGAGCTAAAGCAGGAAGGTGGTAAGTTCAAGACCAGCCTGATCCATATACCAAGAGAGACCATGCCTCAAAATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGCAGGCAGGCAGATAGACAGATAGATAGACATCACAGATTCAATATTCTCTTCTTCTTTGTTTCACTGTCCCAGTCAGAGTGCTACTAGCAACTTAACATCTGAGTTCCTTATTTGATTGTAAGTATTTAATAATTATACTTTAGGCAGATTCTTCTAACAACATGCACAGACAGTACCCACCTCCCTAGTCTATCTAAGTCTGTGCTGAGCGTCAGATTTTGTGGGATAGTTCAGCTCAGTAACTGTGCGTAAGGTCCTGGGAGGGGAAGCAAATAAAGAGCATGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTATAAGCACATGTGTGTATGCATGTAGAAGACAGATGACAACATTAGATGTTGTTCCAACTTTAGATGTTGTTTCCCATCAGACACTGTCTACCCTGGTATTTGGACAGTCTCTCATCTTGGTCTTATTGGTTAGGCTAGACTGTCTAGCCAATTAGCCCCAGGAATCTGCCTGTCTCCAGCTCCTCAACACTGGGTTCACAGTATGTACTTCAGACGTGTGTTCTGGGGAATCAAACTTGGGTCCTTATGCTTTCCTGGGAAACACTTTGCTAACTGAATCACCTCCCCAGCTCTTCTGTCTCAGATCTTAGGAGAAAAGGAGATGAGATGTTGAATAGCTTGGGCATAAGAGGTGCACATGTTCTCTGTGCCTACCCACAGGTCCTATAAGAAATGCTTGTGTTATGGCAAGAGGCAAAGACTTCCTGACTGTATGTTAGACATTAAACAAAGATTAAAAAGAGTCTAATGTTTTTCTTGGCTTTAGTGCCCAACATATTTAGCTAAGTTGTTACATCTTTTTAAAAAAGTCATTGACTAAATAAAAAAAAATTTTTTTCTGTTTGTTTGCTACTGAGGGCCTCACACATGCTAAGCAAGTGCTGTACCTCTAAACTACATGCCTGCTGCAGCCTCCTCTTCCTCTTCCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCCTCCCAGTCTTAATTTTTTTAATTTTGAGACAGGGTAAATTGCTGAGGCTGGCTTTGAACTCTCTCTAAAGCCCAAGCAAGCCTTGAACTTGCAGCCACCCTTCCTTAGTCTCCTGGGTATTAGGATAATATGTTTACACCACCAGACCTATAAAAAGATGAGGCACAGTCACACTTCTATTAGGAGATAAAATCTTGTGGAAAGATAGAAAGCAACACAAAGTAACCTGTAATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCTGATGTAATTGTCATTGTCATCTTGGAGGCTTACTGATGAATAAACTCACCTTTTCTAGTTCTTTCTGAACTCTGGCTGGCTGGTTCAACTCAGCTGCTCTGGCTCAAACTCCTCTCCAAGCTGACTGATTCAATCTGGCTTCTCTCAGCTTCTCGTTGAATTGCTCTGCCTCAAACTAATTCTGGCAATTTATTCTAATCTTCTGGCTCCTTCTTGTTGCAGGATATTTGATCACATTGTGAACCCCAAGATTGTGAACTAGAAAAGGCTGTTTCTTGTTGTGCTGTGGCTCAGCCCTAGCACACAACTTTAATCCAAGAGCTTTCTGTAAACAAGATTAAATAAAGTCAACCCTAGATCAAGAGGCAGAGCAAGCAACCAGTTGACAGGGAGTGAGCAAAAGAAAACACAGGAAGCAGAAAGGAGGGACATTGAGTCGATGGGTATTTAAGATAGTGTAGAAAAAGGGACTTTTTCCCTCTGGAACATCGGTGGAGTAGGAAAGTCAGCTGGGTGCCTTCTCTACCTCTATGAGCTAGCAGGCCTTCACCTCAGCATCTGGCTCCTAAGTCTTTATTGGTAAAATCAAACATTTGGGATTTTGTTCTTTAAAAAAACAGCACCTTCCTCTCTGGCTTCAACTGCTTCTGTTGACCTGCACTGAACTGCATGAAATCATTAACAAACTCAACTCCACTGCACTGCATTCACTTCATTGACTCCCAACTGACTCAACTCCCCACTCACTGAACTCAATGAACTCAACTCCACTCTCCCTGCACTGCTCTTAAACAGCTTTTCTCCCGAGAGTTGGGCATATCCTATCTCTGACTCATTCTGTCAAATCTTTCTCTGACTCATCACCTTGTTGCCCCTCAATTAGATGTCATTGTTTGGAATTAAAAGTGTATACTAGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCGAGCGCAAGGCCCTGGGTTCAGTCCCCAGCTCCAAAAAAAATAAATAAATAAAAATAAAAAATATTTTTTAAAAAAGTGTATACTAAAAGATTCCAGTCAGAGGGATTAAAGTATGTATTAAAGGTAGGTCTGCATTCCAACCAGCTCACAGCAAACCTAGATGGTCTTTGGATGTGATCAAAGCAGCCATGTTGCTGAATTAAAATTCCTCTACAGTAGCCAATATACATCAAGGACTACTAGCTCAGATGAGGGCATCAGAAAGCAGATACTGGAGGAATTAAAAACAATCAAATCTAAATGGGTGAGATATTTGGGGCATGCTGAAGAGATGCCTCAGCCAACAATTATTTGCCTCACAAGTGTGGGGACTTTGGCTTGATCACTAGCAATCACATAAAAAATAGACAGGGAAGCATAGTCCTATGCTGTGGGGTGGAGACAGAAGGATCCCTGGGTCTTGCTGGACAGCTGTTATAGCTGAATTAGCAAGTTTTGGATTCAGTGAGAGAGTCTGTCTCAAAAAAAAATAAGATGGCATATAAGATAGCAGATTTTGACCACTGGCTTTCGCATACCTGGCAGCAAACATGCACAAACTCATATATACACTCTTGCAAATAAATGTTCTTAAAGAGATATTTGGGGCAGAAAGAGTGCTTCATGGAGAATGTGGTAAAGCTTCTGTTACTACTAGCTTTATGACAGCAAGCAGCCTGCATGAGCAGTTGACCTGTGTGTATCCCAGGGTCTTATGCAAGACTTGGGACATAGTACTACCCTGTAAACACATATGAAGAAATAAATGTATGTGTGGATTAATCAAGCAATCAACCATTTTTGCTTTTTTATTATTTTATTTATTTATATCCCAAATGTTGCCTCCACCACCCAGTCCCTCCTTCCAGAGTTCTTACCATATCCCCTCTCCCCTTCTCCTCTGAAAGGATGTCCTACCCCACATCCTCCTTCTCTGGGGGCATCAAGTCTCTACAGGATTAGTTGCTTCCTCTTACTGAGGCCAGACAAGACAATCCTCTGCTATATATACCAATCAATTTTTTTAACCTGATTGTTGGTTAAATGACTGAAGCCAGTGCCCTGGGGAAACCTAGAACTGTCTGAATAATACACATTGGTCATTGTGAATGAATGTAGCAATGGACTGGATCAGAGACTGGCCATGAACTGGATTAGATCTCATTCGGCATCTAGGGAAGAGGTGGTAGAATTTTAATGGCCTGTTTAAATCTCCACAATTGTCCTGTGTCTTAGTTAGGGTGTTACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTATAAGGACAACATTTTAATTGAGGATGGATTACAGCAGAGTTTTGGTCCATTATGTTCAAGGCAGGAGTATGGCAACATCCAGGTAGATGTGATGCAGGAGGAACTGAGAGTTCTACATCTTCGTCTGAAGGCTGCTAGGAGAAGACTGGCTTCTAGAAAGCTAGGATGAGGGTCTTAAAGTCCACACCCATGCCCACAGTGACACACTTCCTCCAAGGCCACACCTACTCCAACAAGACCACACCTCCAAATAGTGCCATTCCCTGGGCCAAGCATATACAACCATCACATCATGCATACCCGTTTGGGCCACAGAAGTGTAGATGGGAAATCAGTAGAGAAGGTGAGGTGTTGCTGGGGCCAAATGGGCTATAGGGGTGAAGAAGAAAGCAGAAGCAAGCACACAGGAAGTCTGCAAAGTTGGACTCCCTTGATTGCTCTGTCTGTATAAGGAAAGTTGTGGGCATCTGGGTTGGTTGGTATGAGATATTGAGAAGGGGGTGAGGAGACATGGGTCTGAGTGTGACTACCCATTTTAAAAAGAATTGTCAAATAAGGAGTACTGCAGGCCTTTCAAGCAAGATACAAAAACATGTTAACTATAAAGGACAGACCAAGTGAGCAAGCTTATGTCCCAGGAGGGTGTTGATAAATAATGACATTTCCTCCACTGTCTGTAGCCCTGGAGCAAATTCCACTAAGAGGTTAATTTATGGCTTCTAGAACAGAGGGAAGAGATAAAGCACCAAGCTGAGATCTGCCTGGTTCTGCAGAGAAGCCATTTGCTCACTACAGATTTTCTAGACCCCCCAGAAAAGAGTTGGCTGCAAACTGTGTGCTCCTTGCTTTGCTCCTCCTTGCCTCATACCCTGAGGTAAATGGGTGACTCCTCATGGGCAAAGATCCCAGACTGACACATTCCATGATTTACAAGTCACCAATAGATTCCATGCCTTTTAAATGGTTCAAGGCATTAGCCTGGATGTCTGATTCCTGGTCATTCACTCTCTACCCTCTTCCCACCAGTCCAGCAGCTACAGCATGGCAGGCCCCTGACCTCATTGTATCTTCCTTTCCTCTGCTGAGAATGTGTGTTAGTTACTCCTATGGCCTCCCTGAGAGGTAGGAAATTAGTTCTGTGGAGGACAAGGGGAGGGGATTCTGCAAGACTCTGGAAGAAAAGCTTGTTGGAACTCTGTACACTGTGTTTCGGGCAAGAGGATTAGCATTCAGGTAAATATTAGCGTTCAAGACATTTCAGGTCTTTAATCTACAAATTGGATCTTCGAGATGGCTTTCCTCAAAACCTGATGACCTGAGTTCAATTCGTAGGGCTAATCTCTATCCCCTACATGCACTGTGGCATGCACACCCACATATATGTTCTCAACACATACACAGACAGGTAACTGTAACAAAACTTTAACATATCTGCAGGAAAAAAAAAGAACTACTCATTTTGATATTTCAAACAAACCTCTTTGGGAGCTGAAGTTCTGGGAAAAAGAAAATCCTTGTGGTTATGGAGGGATTCCACAGCAGTGAAGTAGGAAGGAGGTGGTGCGTGCAGGCATCTGCTTCTTAGCCTTGAGGTCTTCCAAGACCTGGGGCAGCTGCCGAGCTCACATGAGCCCTGAGTACATGCCACCGAAGCTTGCCTGCCACTTCCTTGGCTTGAGGGCAAGAGCAGCTCATCCCTCATGTCCACCATCCTCTGACTCACATTCCTTCTGGGGACAGTCTTGAACTTCTAATGTGTCAGGCAACCCTGAGGGAACCACCCAGAAATCAGAGCTTGAGGCTAACCAGTATTAGAGTCACTACAATATTGGGCAAGAAAGGGGTGTGAGAACAGTGCTCAGGGTGCCAGTGGCCACTCTCCCCAGAAGCCGGAATAGAGACAGCTCCACTTTTACTTTTCCCTGCTTATTAATAAGACTATAAAGTTGAACAAGTTGCCCAACCTCACCAAATGTTCTCATGTTTTTACCTACAATTAGGGACGTGTTATTTGCCATCCTGTAGGTTTTGTGGGAGTTGTAGAAGGGAATAGATGTAGTTCTGTTCACAGAACCCTAAATGCAGTCGACTGACGCTTGATTTGCCAAGGCCTTTGCTATTAAAGAAGAAACAAAACACAGAAAGGGGTGCAGAGGAGTCTGGTAAGGACCTTGAACAACAGACTATATTTTGTTGAGTGAGTAAATGAATGAGTGGATGACATGGATATGGTTCTGGTCTGAATTACTTCTATTGCTTTGACAAAGGTAAGGCAGCAGGACAAGCTGAGAGCGCACATCTTGATCAACAAACAGGAGAGCAGAGGGAGGTGAAATGGGAGTGGCAGGCTTCTTTTGAAACCTCAAAGCCTGACCCCAGTAACACACCTCCTCCAAGGAGGCCATACCTTCTAATCCTTTCCATATGGTTCCACCAACTGAGGACCAAGTAGTCAAACATGAACCATTCCCATTCTCTTCTCCATCCCTCAGACACACATTCCGTACATACAAATACACATACAGACCATCATATGCCTCCATACACATATATGAACAAGGACTCACATGACACGCACACATAGCCTTGTACATATGTACACAAATTCACAGACATAGTACTAGCTCATAGATACACAAAGACATTTAAATTCCATACACAGGAAGATATGTGTACCATGCATATGTACCATACACATGTACCATTATGCACACATGTGTGCATCACACAGACACACATGTATGAATTGAGCTGGGAGAGGAATGAAGACAATCATAGCTGGGGCTAACCCTGGGGTTCACTATCTCTGCTGTAAAGCCTACAGGTCTGCCAATAGGTTGTATCCTGTCCTAAATCAAGGCAGGAAAGGAGATAAGTGCTCCAACAAGTGTGACTGTGGCCTCAGGCCCTGTGCAGATCCCTTGTCTGGGTGGCTGCTGAGTTTCCCAGCCAGCTCTTCTTTCTCTATAGTACCATGGTAGGGCTCATATGTCTCATCCATAAGGGTCTACAACTGCTGATGGCCCAGAGAAGATCTGTGAATGGAATATGTCTGCTGTGCTTGCCATGGACGAGTGGGACAGCCATAACTTTCCTTCTGGGCATGAGGCATCCACACTAGGTGCCAGGTCCCTCCTGATGTGGAAAGAGGCAGGGAGGGGGTTAGCCCGAGGGCTTGGATTGGACCTCAGGCCACTTCTTGGCTCATCACTGCCCATGTGTCTAGGTTGCACGAGTCCTTTGGGCTGATGAGAGCTGAAAGGATCCAGTCGAGAAAACTTAACCCTGCCCTGACAGCTTTCCTTCCGCTTTGCACGGAGGGAGCTGTGGCCAAATGCCATTATTCTCGCAAATAAATAAAGTATGCAAAGTCGAATTCTTTCCACTGTTGTGCAGAACCTGTGGAGTGAGGTCTGGCTCTGGACTCTGAAGCCTGTGGCAGGAGACATTAATCCCTGGGCACCCAAATAACGGCTCTGTTCAATCTCTGATTCATTTGCATTCTGGCTGGACAGGGCACTTGGGTCACTGGAGTGCTTGGGTCACTTTCAGCTTGGCCCTTACCAGCTCCACCTCTCCCTCCCTGGCCTTGCTCAGGGTGTGCCTCACAGTGTACCTCAGGGTGGTCTGAGGAAGGAATTAGAATTACTATCTATTGCATCTGTAAATTGTGGACAGTAGCAATAAATCACATTATTCTACTTAAGGGTTAGATTAGAGGCTGCATGGGAAGTGTTTGACATAAACACGCCAGGCATCCTAGTAGCTGTTGATATTTTATGCTGTGGCCCATAGTATCTGAGGGCGAACTGGAGCTCGGGACATCGAGCAGGGAGGGAGGCACAGCTGGAATCAGCCATGAAAGATTATGCACACCTCTAACTTAGATAGCTGTGTATTATAGAAAAAAGGGTCTGGTTGAGGAACAAGTAGAGCTAAGTGCTTTAGATAGGACTCTCTGGCCAGTCCCATGTCAGATAGATGGAGTCCATTAGGGATTCTTGCAGTGTATGACAATGCCTCCAGAGAGACAAGGGAGGAGATCTCAAAGTGAGACATTCTGGATTTGAACACTGGTGCACTATGCCTTGGGGAAGCATAAAAAGTATCAGGGTAACTTCGGGGACCCCTCTCCCAGTCGTTTCTCTCCATGTGACCTCTAAAGGTCTCACTTCTCACGCAAGGCCATTCCAACTGGGTGCCAGGGAACAGAGGATATCCAGGAGTAGGTACTTCCTCCCACTTTCCCTGATAGTCTTCTACTTCCTTCAGAAGCGCCCTGCCAATGAGTCCCTCTCAACCCAAATCCAAACTGCTGCCCTCACTGACCCAGAAAGATTAGAGGGCAGCTTTCTAAGGGACTCAGGACACGTAGAGTCTTGCCTTGCCACAGCCAAATAATCATCCCCAGATCTATTTAGCTCACAGCTCCCCAGGTTTGAGGCTGCCTACACACGACATGCTCAACACTGGGTGGCATTGCTTCTTTTCCTGTAAGCCCTGAACCCTCATTTTGAGATTATAAAAAGACAAAAAATACTTTCTACCTTATGATTTTATGTTTAAAAGCCCATTTGAGAAGAATCTACTGCCTGTGGCTCCCCATGTTTTCTTATAGGAAAAAGGGGAGCTTTGGGAACCTCCTCAAAGCTTCTTGGAGCACTCCAAGTCATCAAAGGGCAATGCCTGCTACCACACTACCGCCTAATGTATAACAACTGATAATAGTGCTTTTATCACTGGGAGAACTTGGGCTCCTCTGCAGAGCCTGGGGAGAGGTGGGCCAGCAGAAATCAGCCCGTGGCCCCTGAGGAAGGAATCGCTGTCTGGCACACGTCCACTCTTGTCATAAACCCCTGACCTTCCACATCTCCTTCTTCTTAG
Seq C2 exon
AGCCTAAATATACAGGTGGAAGACATCCGGATTCGACCCATCCTGTCTGCCTTCCGCCATCGCAAGCCTGTGACAGAGGGCTACGTGGAGGTAAAGGAGGGCAAGGCCTGGAAGCAGATCTGTGACAAGCACTGGACAGCCAAGAATTCCCACGTGGTCTGTGGCATGTTTGGCTTCCCAGCAGAGAAGACTTACAACCCCAAAGCCTACAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000016758:ENSRNOT00000058663:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0053013=SRCR=PU(48.1=71.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]