HsaINT0185335 @ hg19
Intron Retention
Gene
ENSG00000160445 | ZER1
Description
zer-1 homolog (C. elegans) [Source:HGNC Symbol;Acc:30960]
Coordinates
chr9:131517687-131534198:-
Coord C1 exon
chr9:131533860-131534198
Coord A exon
chr9:131517939-131533859
Coord C2 exon
chr9:131517687-131517938
Length
15921 bp
Sequences
Splice sites
5' ss Seq
AGGGTAGGT
5' ss Score
8.1
3' ss Seq
GCATCTTGTCCACTCCCCAGGCA
3' ss Score
6.25
Exon sequences
Seq C1 exon
TGACAGCGGAGGCGGCGGCGGCTGCAGGCTCCGAGCCGTAGGAGCCGGATCGGGGGAGGGGCCGGGCCCAGGAGCCTCAGCCCCGCCGGCAGCCCTAAGGGCAAGGTAACCGCCACGGGGTCCCCGTCGCGACCCCCTCCCTCCCGGAGCTCCCGTCCCCGGGATCCCAAGCTCCGCCCCGCCGACCCCCGTCTCCCCTGGACCCCGGCTCTAGCCTGACGAGATCCCCAACCTCCTGAGGTGCTCTGGCCCCGGATTCTCCCGGGCTGCATTCTCTGCTCCTCCTCGCCTGCGAAGCATCACGTCCGCTTCCCGACGCTGAGGGCAGCCCCGTCCAGG
Seq A exon
GTAGGTCCCGGACCCCGGGCCAAGGGACGTACCTGCGTCCTCCTCCTTCGCCTCCTGCCTACGGGGCCTAAGCATCGCCGCTGCAACCACTCTCTGAGGTCCATCTCCGCCAGTGGTGGGAGGGTTCCTTTCTCTATCCCTGCCGCCAGGTCTGAGAATCGTGTCTTTAAAACTGAGCTCCCTTCCTCCAGAAAGAAAATGACGCTCTGTCGTTTGCCCCTACAAGATGGGGGATCGGTGTAGGGCTGAAAGGGCCACCCTCTGCCCCTCCTACCTGTTGGATGAGCTTAAGTTCCCCCAGAGAAGTGCTTAGAAGCTCAAGGACGACTTGGATTCTGGATCAGCTCCCAAAAGGGATGACACAAAGTATAGGGAAATCCAACAGGGTGAGGTTGCAACCGGAGGGCCAAGGGAGCCCGACAGGTGAGTTGATAGTGAAACTGACTGTGCTGGCCACTATAGCTCTCTGGGTGGAACTTGTCTTGGCTGCTCTTTGACCGAAAGAGCCCAAGATTTCCAGTCTTTGCCTGTGTTTGTCAGTCCATTCGTTTTGTTTTGTTTTGTTTTTCTTTAAATAGAGATGGGGTCTCACTATGTTACCCAAGCTGGTCTCGAACTCCTGGGCTCAAGTGATCCGCCCGCTCCAGCCTCCAAAAGTGCTGGAAATACAGGCATGAGCCACCGCGCTCAGCTAGTGCATTTGATTTTTAAGGGGGAGGGGAATGGAATGTCTGATGTCTTGGGAAAATCCTTCCATATATGATCTTTCACAGAATGTTTCTCTTCAGACTTCAAACTGGTTAGGATGAGCATAAAAGCATAGCCTTGAAAAGGGTCACGGGAGGCTATACTTAGAGCAGAAAGTGGTGGCCAGGGGTGAAGGGCCTCGCTACTTTGGTTCATTTGTTCATTCAGCAAATAATAAACATGATATGTAAGGAGGTAATAAGTGGTTTGGAGAAAAATAGAGAAGGAAGGACCATGGGGAAGGAGTTGGGAGTTGTCATTTTATAGAGGGTGTTCAGGGAAGGTCTCTAGTAAGGTGACCTTTGAGCAGAGATAAGTGAGGGAGCAAGCCAGGTAGTTCTCTTGTGGCAGAGCATTCCGCAGCAAATGCAAAGGTCCTGTGGTCATATGCCTGGTGATTTGAAGAAACAGCATAAGGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGCCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCGACATGGTGAAACCCCATCTCTACTAAAAGTACCAAAAAAAAAATTAGCTGGCCGTGGTGGCTCATGTCTGTAATCCAAGTTACTCAGGAGGCTGAGGCAGGAGAATTATTTGAACCTGAGAGGTGGAGGTTGCAGTGAGCCGAGATTGTGCCCATTGCATTCCAGCCTGGGTGACAAGAGTGAGACTCTGTCTCAAAAAAAAGAAAGAAACAGTGGGAGGATGGGGGACTGGAGCAGGTTGAAGAAAGGGAAGAGTGGTTGGCAAGAAAGTCAGAGAACAGTGGGGACCAGAAAAAGGTGGGGAAGACATCAGGGGCTGTCCTTGTGATACAGGGTCACAGGGTGTCTAATGGGACACCCTTTCAGAACCGTACTTGTTGAAGTGTCTGGTGGTTGGAGAAAATACAGATTTGTTTTAGATGACAAATGGCCATTGTGCTTGGGGCTTCGGTTGTAAGTACCCTTCTTCCATCTTTGTAATGACCATTGATGGAACAAATACAAAGAATCATGGTCACAGAGAACTGCGATTAAATCAAGTTAAGTTATGCCGCTGCTTCCTGGTTGTGAGAAGGTGGGCACGGGACCTTTTTCCACCTCAATCTTCTCATCTGGAAAATACAGCAGGCTGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTGACGCATGCCTGTAATCTCAGCTACTGGAGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGAAGTGAGCTGAGATCATGCCACTGCAGCACTCCAGCCTGGGCGACAGGAGCGAAACTCCATCTCAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAATAGGGCTGTTGGATTAGATAAAATCATGGGCTGAAGTGCTTAATGCAGTATTTCACACAAAGTGCTCAATACATAGCGGTCACGCTGATGAGGATGATGTGATGATGAGGAATGTGGGCATGTATGTCTGCCTCAGAGCCGTTCGTTTTAGCACTAGCTGGTGGTGTCACCAGCTCTAGCTGCCTCCATCAACTAGTAGGATTTGAGGAAATATTGGGGAAAGCAAGACAGAAACTTCTTGACACCCCTCAGAGGTAACTGGGTTAATATTCTGCAGAGAAGACGTTAGCTTGGTCCTGGCTTTTCTGACAGCAGCGGAGGGTGATGGGGACTTTTAAAAAAGAGCCCAGCACTGCCAGCGCTTTGGGAGGATCGCTTGAGGCCAGGAGTTTGAGACCAGTCTGGAGAACATAGGGAAACCCTATCTCTAAAAAAAAAAGAATTAAAATGAGCCCAGCAAATTTCCATTCTACCACGTAAAATAGGCAAAATGAGGGTGTTGAAATGAATGTGACTTGGAGACAGGTGGGGAGGGGCAGTGTATGCTGGGCCTAGATATGTGGTTGGAGTGTGCGTGGCTGATCTACGGGTAGAGGCTGGTGATCCGGAAGTGCCCGGCAGAGGCTGAGACTTTCCAGCCTGCTTTATAGGAAGCAGAACCACAGTTGATCTCCCTCCTTATACCCCAAGCCCGGACTATATCCTCAGGCCTGGGACACAGGCTGAGCAGGGCAACTGGGCCAGAGAATTTGAAAATGAAAGGTCAGAGCACTTAGGAGCTGAGAGCCAGCATGTTGGGGTAGGCTGTTGTGGGTAGAACCCCAGGCTGGTGACCTGCGGACCTGGTTCAAATCCCGGCTCTGCTGTTGGCTTGCTGTGTGAGTTAGGCAGGTTCCATCTCCTCTCTGGGCCTCAGTTTTCCTATTTGTAGATTAAGAATAATGGCCTTCCCTTGCCTCCGACTAACTCTAAAGGCTGTTGGGAGGATGAAATGAGACACAGCTTGTGAAAGAATTAGGTGTGTTCTGAAGCTCTCTACAAAGGTATTATCATTAGTACCACTAGGATTATGCAGACACGTTTTGGGGGCCCACTAGCTGGAAGACTGCTCTTGGCACTCTGGTTTTTTTGCTTGGCTTCAGTACCTCATCTGTTCTGGAGTCCTGAGAGGTGAGTGCAGAGACCCCTGTCTGGTTATCTATTTGTGGACCACTGTCTTATATCTGGCGCAATCGCTGAAACTGATTTTCCAGCTTCAGAGATGCAGAAGGGTCTCTTGAAGCATTATTCTCAGGAACATCACTCTTCATAATTATTGGTTACCACCTTCCTGCCATCCTTTCATGGCATCTCCTCAGCAACCCTGTTCACAACACGCGCAACACAGCGTGTGCCACTCGCAACATGCTGACAGGTAAGGACCTTGATAAATATTGAGGCTGGAAAACATTGGCTGGGGATCTTGTGGAGCCGAGGCCCTGTCACTGGCATTGAGCCACTCACATACTCTGTAATGGAGACCCCAGAAATCACATAGGGTCCCTGCCCTCAGGAAGCTTTCAATGCTGTGGCCAAAAAATGACATGCCACGGAGTGGTTACCAGCAGTACTGGATCATGTGAGCTCAGTGCCTGAGTTGTAAGGAAGCGGCGGAGGCTCGTGGAACAGAAGGGAAAGCTGAGGTTGGAGAAATGGTCCCTCCCCATAGCATAATGGCAAGGGGCTCGAACTTTAGGGTCACACACTTACCGGAGGAACAACTCATTGCTCATCTTTCAACCATTGTTTCCTTATCTGGGAAACAAAATGATAATGTATTATCATATTGATAAAATGTTATCTGTGGCAGCTGGGTGCGGTGGCTCACACCTGTAATCCAGCACTTTGGGAGGCTGAGGTGGGCGTATTGCTTGAGCCCAGGAGTTTGAGACAAGCCTGGGCAACATGGTGAGCCCTCATCGCTACAAAAAATAAAAAAATTAGCCAGGTCTGTTGGTATACGTCTGTAGTCACAGCTACTCCAGAGGCTGAGGTGGGAGATTGCTTGAACGTGAGAGGTGGAGGTTGCAGCGAGCTGAGATCGTACCACTGCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTCTTAAAAGAAAAATAAATAAATAGGCCGACCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACTAAAAATACAAAAATTAGCCTGGCATGGTGGCGGGCACCTGTAATCCCAGCTACTTGGTTGGCTGAGGCAGGAGAATTGCCTGAACCCAGGAGGCAGAGGCTGCAGTGAGCCGAGATTGTGCCATTGCACTCCAGCTTGGGCAACAAGAGCAAAATTCCATCTCAAAAAAAAAAAGAAAGAAAAATAAATAAATAAATAAATAAGTTATCTGTGACTTTGATGCGAACTGCTTGGAAAGCTGGACACACTGGGTCTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTTGCTCTGTCACCCAGGCAGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCTAAGTAGCTGGGATTACAGGCATCCGCCACCATGCCTGGCTAATTTTTGTATTTTTAATAGAGATGGAGTTTCACCATGTTGGCCAGGCTGGGCTCGAACTCCTGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAGGCCACTGTGCCCAGCCTGACACACTGCGTCTTGAACTAATGAACTACCTGTGTACATATCTGTCTGTTCAGATCCATAGTCTCTGGCAAATTGCATAGCCATAGCCCCTTCCTTCCAGCTGCCTTTTCTGTAAGTTGTAGATGGTAACTCCTGCCTTGTTGGGTGTTGAGAGAATTCAATTAATTAACACATATAAAATACTTAACAGAGTTCTTTTTTTTTTTTTTTTTTTGAGATGGAATCTTGCTCTGTTGCCAGGCTGGAGTACAGTGGTGCAATCTTGGCTCACTGGAACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTATAGGCGCCCGCCACCACGCCCTGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGATGGTCTCAATCTCTTCACCTCGTGATCCGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCTCCACGCCCAGCCAGAATTCTTGGTATATACTTGGTATTCAGTATGGGTAGGATCATTAATACATTTGGTTACAAGAATAGAACCCAACCAGTCTGATTACTAGCCGAATGCAGCCTCCTCAAGGCCTCTCTGTCTCCAGCATCATGAGCAGCCACCTAGCTGTGAGGCACACTCCCCAATTATTGTGTGTCTGCATCTTTCTGACATAACCCAACTCATAGATTTAATCTCTGCAGACTTTTCAGAGCCAGGTGGCGTCTGGTTTTCACCTGTTTCCCGACCACCTGGAGATCCCCACACTTGCTGTGACTCCCCTCACACCCCCAGTCTCTGGCCCTTGATCTGCTGCCTCCTGGAAAGCGTCTAGCCTCTGTAAATAGGGCATTTGTTTGGGTTTTCCCCCCAGCTCCTAGGTTAATATTTCACAGGGTGAGTACTGCTCCAAGGCTCAGAGCTTCTGGCTCCCCCAACCTCTCTGTCCTCTGGGTATCAGGACACTGGTGGGATCCCATGCTCCCACCTCCAGACTTCAGTTTCTCTTTCCCTCCCATTGTTTGGATGGATGGACTGAAGACCAAATATTTGGTGAGAAGCGGGGGTCTGCTTTAGGTTTGCATCCCACTCTCATCAGTTTTGTGATCTCAGGCAAGCTTCTGCTTAGTTGTGTATGCGTCAGTATCTTCATCAGAAAATGGGGTAATAATCTCTATCTTGCAGTACTAGAGTAAGGGAATTCCAGCCACAGCAAACCTTTGTTCTATTAAACACCAGGCATAAATTGGGCACCGAAGTCAGACACCAAGGATACAGGTGCGTGCGCGCTTGCGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGTGCATGGATGCAGGCATGCAAGCAAGCATACAGCTTCTGTCCTCCCAGAGCTCACAGGCAGTAGGAGGGTGTCAGTTGACAAATTGTTATGTAAATGATTAATTAGTTGCAAGTACAGGGTACTAGGAAATATTTTGTCGGTTGAGTAAGAGACTCGAGGGAGTAAAGCCTGTAAGGAGCTTAGGACCACATCTGGAAGCAGCCAACATGGACGTGGTATGGCGGTGCCTTCTGCTGCTGCTGCTGCTGGTGCTGTTTTTCTCTCTCTTCTCTCCCACTTCCTTCATTCCCCAGGATGTCGAATGTTCATGATAGACCTAGTATTAGAGAACATGCAAGAAAAGGGATGGAGAAAGACACAGGGTTCTCCCAGTGTGGTGGTCGGTCATAACCAGAGCTCCCTCTGTCCTCAGTTGCTGGAATTCCAGATGGCCTGTGACTGCCCTGAGAATGACAATCCCTAAGGAATGGAGTAGGTAGAGTGGAGTAGGTAGAGATGGCTGCCTCTGGCAGGTGCCAGGCCCGCAGCTGGATGGGTCTCAGGGCATGGTAGCCCCGGGGCCCTTCAGTCTCTGTGCCAGGATGTAAGATGGCTGCTTCCTCTTCCAGCTCATTCCAGCCCTGAGTGGCAAGGTCAACACTGCTAAGGGGAGGCTAGCAGATGGCGCCATCTACCTGGCTTATGTTTTGGGGGCTTTTGGTGACCGTGACAACTGACGTGGTGGTGTTTCTTCCACTTGGGGAGCATGGTAAGGGCAGAGCAGCTGCCTAGGTAACTGGGCTCAGACCTGCAGAAAAGGCAAAACCCCAGTGGCTCTCCCTCATTCAGAGCCTCCGAGCCAAGAGGCATCATTTGCAGCCACTGGGCGCCCAGCAGTGTCCTGAGTGCAGCAAGCAGGGAGAATGCGAGAGTGTACTATACCTCCCAGGCCTCGTGCAGACCTCTGATGGCGAGTACTTTGTCATTCCTTCCACAGGCCTTTGTTGAAACCTCACCTTGTGGCAGGCCCCACATTGAGTGTTCAGTGCTTCCTTTGTTCATTTAGCAAATAGTCATGGACCTGGGCCCGTAGTGCCAACGTCCCATGCACCCCCTCTCCTTGCAGCTTAGGTACTTCTTTGCTTCCTCCCAAAGCGCCTTCCCCTTCTCTCCCCTCCACCAGAGTTAACTAGGACTTATCTTTTGGGTCCCAGCTGAAATGTCACTTCTTTTTTTTTTTTTGATGGAGTTTTGCTCTTATTGCCCAGGCTAGAGTGCAATGGTGTGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGTGCGCCACCAGCCCAGCTTATTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTACCTCAGTCTCCCAAAGTTTTGGGATTACAGGTGTGAGCCACTGCACCTGGCCTGAAATGTCACTTCTAAGGATACCTGCTCTGACTCCCCAGTCCAGGGCAAGTCCCCTGATTGGGCATCCAGAGCCCCAGGCCCCTTCTCCTGCAAGACACTGGTCCCAGTTACGCGACAGGCGCTTATGGGCCCTGTAGGTGGATCTGTCTCCCTCCGGAGCCAGTACGCTCCATGTGGTCAAGGACCTTGTCCGGCTCGCTCACCAAGGACCCCCAGTGCTCAGCAGGGACTGAGTGAGCAGGTCCAGGGAGGTGATACCAAACAAGACAGCCTGGTTTTGCCCTCATGGACCTGGCCATCCATCAAGGATGCTGAATCATCAAAGCCACATCGTACCAAGTGTTCATTGCTGTGGTAGATCGGGCCTGTGGGGGGACTCAGCAGGCACACCCTGGTGGGTTAAGCATGGCTTCCCAGAGGAAGTAACTTTGACACTGGGACCATAGGTATCAGCTACGTGAAAGGAGAGTTCAAAGATCATGTGGGCTGGAGTGGCCAGGAGATACTTCCTGGAGGAAGGACATGGAGTGTATTTGGGTAGGGGAGGGGAGAAGGCAGTATTTAAATTAGAAAGTGCAGTAATTAGTTGAATTTGGATGGTCCTGGTTGAAAGAGAACAGACTGGGCAAAGGTCTGAAGGTGACCTGTGCCGAGGGCCTTTTGCCAGGACAGTGAATGATGAGGCCAGGCTGGCTGGAGTAGGGGGGCAGTGGGGACCAAGTAGGCCAGAAAGCTGGCTGTAATTCCGGTGGGCTTGAAAAGAGTTGCTTTCCAAGAGTGGGGACTCTCTGCCAGCAGTGCTCCCTCTGGTTCCAGTTTCCCAGGCAAGAGAGGCTGCTGGGCTCTTAAAGATCTTGAAGCAAATGAAGGCAAAGGAAGGCCATGCCCGGGGCCCAGGCATCCTGGCTTTTGTGCCTTCCCTCGAGGGTGCCATGCTGCCAGTGGGACAGCTGACACAATGAGCCTTGTTGTGGGAGACCCAGGCCGGGGAGCACAGGCCCGGAGCTGGGAGCCAGGGCAGATGAGGTAGGAGAAGGTAATGATTATAACAACAACATAATAACGGTTGTCTTTATTGAGCAATGACTACATGCCAGACACCGTTCTAAGCCCTTTTGATATTATTCCATGGAATCTTCACACCGTGCTGGGGATGAGGTATTGTGCTGCTTCTATTTTAGAGGAAAAGTGACTGAGGCACAGAGAGGTGGAGACACTTGCCCAAGTTTGTCTCCTCGTGAGCAGCAAGGCTGAAATGTGAGCTATGCCTGCCTGAATCCACAGCCCATCCACACACAGTCCCCAGTAGACAGTGGTGCCACAGTTGAACTCAGAACTGGCTGATTCCAAAGCCCAGTGTGCCCTGTGGCTTCCCGCTGGATTTCCTGAGCAGTCTGGAAGGTTTACAAATGGGCACAGAGGGAGGCTCCCAGAAGCTGGGACAATGCTGGGCCCCAGAACTCCAGAACCCTCTAAGTCAGGGGTGTCCAATCTTTTAGCTTCCCTGGGCCACACTGGAAAAGGAACTGTCTTGGGCGACACGTAAAATACACCAACACTAACAACAGCAGATGAGCTAAAAAAAAAAAAAAGTCCATAAATGTCATAATGTTTTAAGAAAGTTTACAAATTTGTGTTGGGCTGCATTCAAAGCTGTCCTGGGCCACATGCAGCCCATGGACCACAGGTTGGACAAGCTTGCTCTAAGAGATGTGAGGGATTCCACGAGACCAGGTTCCAGTCTAGTTTACACAGCTCCCTCTGTTTGACCTTGAGTTTCCTCCTCTATAAGATGGGGTCAGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAACATTTTGGGAGGCTGAGGCGGGCGGATCACAAGGTCAGGAGTTCGAGACCATCCTGGCTAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCGAGCGTGGTCGCAGGCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATGGCATGAACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCGTACCACTGTATTCCAGCCTGGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAACAAATTATGGGGTCATAGGGCTGGACATGGTGGCTCATGACTGTAGTTCCACCATTTTGGGAGGCGAGGCGGGTGGATCACCTGAGCTCAGGAGTTCGAGACCAGCCTGGCTAACATAGCAAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTAGGGGCAGGTGCCTGTAGTCCCAGGTACTCAGGAAGCTGAGGCAGGAGAATAACTTGAACCTGGAAAGCAGAGGTTGCAGTGAGCTGAGATGGTGCCGCTGCACTCCAGCCTGGGTGACAGAGCAAGACTCTGAAAAAAGAAAAAAAAGGTGGGGTCATAACCACCATGTTGTGTACTTAGTCTGTTGGGCTGGGACTAAGCATTTCTTCAACATTATCTCATTTAGTACCACAGCCCTGTGAAGTAGAGATTATTATCCCCCCCTCCCTTTTTTTTTTTTTTTGAGACAGAGTCTGGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTTCTACCTCAGCCTCCCGAGTAGCTGGGACTATAGGTGCCCACCACCACGCCCAGCTAATTTTTTGTATTTTTAGTAGAGACAGGTTTCACTGTGTTAGCCAGGATGGTCTTGATCTCCTGACCTCATGATTCGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCTGGCCTATTATCCCCATTTTTCAGATGAGGAAACTGAGGTCTGGAGAGGTTAAGTAACTTTTTTTTTTTTTAAACGGAGTCTCGCTGTGTCGCCAGGCTGGAGTGCAGTGTCACCAGGCTGGAGTGCAGTGGCGCAATCTTGGCTCGCTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTCCCTCAGCCTCTTGAGTAGCTGGGATTACAGGTGTGCACCACAACACCCAGCTTTTTTTTTTGTATTTTGGTAGAGACGGGGTTTCACTATGTTGGCCTCAATGGAGAGGTTAAGTAATTTTACAGTGAATTGTATAACTGGGTCAAAACATAGATCTGTCTGACCACAGAGCCTGCACTTAAAAGAAAACTTTTGGGGCTGGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACAAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTTAAACCCCATCTCTACCAAAAATACAAAATATTAGCCGGGCGTGGTGGCACACGCCTGTAGTCTCAGCTACTCGGGAGGCTGGGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATTGCCCCACTGCACTCCAGCCTGGGTGACAGAACAAGACTCCGTCTCAAAAAAATAAAAAACTTTTATGAAGTATAACATACATGAGAGACCAGGCACAGTGGCTCACGCCTGCAATCCCAGCATTTTGGAAGGCCAAGATGGGAGGATCGCTTGAGCCCAGGAGTTCGAGACCAACCTGGGCAACACAGAAAGACCCTGTCTTTACTAAAAATTAAAAAATTTACTGGGCGTGGTGGCACATGCCTGTGGTCCCAGCTACTCAACAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGGTCAAGGCTGCGGTGAGCCGTGATCATACCACCACACTCCAGCCTGGGCAACAGTATGAGACTCTGTCTCAGAAAAAAACAACCAACCAAACAAACAAACAAAAAAATACATACATAAGGAAAGATGCACAAAATATGAGTATAGAGTCTGATTAATTTTTTTCTTTTTTTTTGAGACGGAGTCTCGCTCTGTTGCCCAGACTGGAGTGCAGTGGTGCCATCTTGGGTCACTGCAAGCTCCGCCTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCGTGCCACCACGCCCGGCTAATTTTTTCTATTTTTAGTAGAGACAAGGTTTTACTGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCCGCCATTTTCTTAACTTTCTATTCAATTACAATATTCGGGCCAGGCACGGTGGCTCACATCTGTAATCCCAGCACTTTGGGAGGCAGAGATGGGCGGATCACCTGAGGTAAGGAGTTCGAGACCAGCCTGAGCAACATGATGAAACCCCATCTCTACCAAAAAAAAAAAAAAAAAAATTAGCTGGGTGTGGTGGCAGGCACCTGTAATCCCAGTTACTCCAGAGGCTGAGGCAGGAGAACCGCTTGAACCTGAGAGGCGGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACCCCAGCCTAGATGACAGGGTTAGACTCCGTCTCAAAAGAAAAAAAAAAACAATATTCACTGGCTGGGCGCGGTGGCCCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGACTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCCAGCCTGGTGACAGAGCAAGACTCAGTCTAAAAAAAAAAAAAAAAATTCACTTGAAAAAGTACACACATCATGATACACAGGTCGGTGAAGATTCACACAGTAAGCGAGCCTGGATACCCAGTACTCTGATCAAGGAGACTAGAAGCTCCTCAGCACCCAGAAACTCCCTTCCAATCACCTCCCCGGGTAACCACAGTCCTCACTTCTCCCACCACAGATGAGATTCCCCTGATTTTGAACTTAGTGGAGTGACACAGTGTAGATCCTTTTGTGTCTGACTCCTCTCATTAAATGCAGTAAGGGTTGGCCAGGTGCAGCGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCGGGGGTAAGCAGATTGCTTGAGCACAAGAGTTTGAGACCAGCCTGAATAACATAGCAAGATCTTGTCTCTACAAAACAAAAAACAAAAAACAAAGAAACCAGAAAGATTAGCCGGGTGTGGTGATGCATGCCTGTAGTCTCAGGTACTCAGGAGGCTAAGGTGGGAGGATCGCTTGAGCCTGGGAAATAGAGGGTGCAGTGAGCCAAGATCACACCACTGCACTCCAGCCCAGGTAATGAGATTCTATCTCAAAAATTAAAAATTAAGGCCAGGCACAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGAGCAGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGATAACCCTGTCTCTACTAAAAGAAAAAAATACAAAAATTAGCCCGGCGTGATGGCGCACGCTTGTAATCCCAGGTATTCGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGAGCAACAGAGCAAGACTCTATCTCAAAAAAAAAAAAAAAACCTAAACTAAAAATTAAAAAAAAAAAACATTGTAAGCCTTATCCAAGCTGTTAACAGGAGTTTGTGCCTTCTCATTGCCATGCAGTATTTAGTAGATGAATATACCATAATTATCCATTCCAATGCCAGTGGACATGTAGGTTCTTTTCTGGTTTTGGCCATTACAAATAGTGCTGCTGTGAACATTCTAGTGTAGATCTTTTGGTGCACATTTACTTATGCATTTCTGTTGGGTATATACCTAGGAGTCAAGTTGCTAAGTGTTGAACGTATGTACGTTCAGCTTTAGTAAATAGTGAATAGTGTTAAACACTGTTCCCATTGTATTCCCAGTTCACACCAATTTGCCCTGCCGCCAGCCCTGTGGGAGATTTCCCACTGTTCCCCGTCTTCCCCAATGCCAGGTATTGCCCATGTTGTTGTTGCTGCAGTTGCGTTCAGTTGAGCCAGTGGGCGTGTGGAAAATGGCATCTCATTGTGGCTTTACTGTGCACTTCCCTAATAGTAAAGAAGCTGAGTGCTTTTCACATGTTTGTTGTCTGTTTCACTATCTTCCTTCATGAAATGCCTGTTCAAATCTTTCACTCTTTTTTTTTTTTTGAGACAGGGTCTGGCTTTGTTGCCCAGGCTAGAGCGCGGTGGTGCAATCACAGCTCACTGCAGCCTCAACCTCTTGGGCTCAGGTGATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCACATGGCACCGTGCCCAGCTAATTTTTTTTGTATTTTTTGTAGAGACAGGGTTTCGCCATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCAATTTGCCCACCTCTGGCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACTGCACCCAGGCTCTGTGTGGTAACTTTTGATGAACAGAGTTTTTAATTTTGAGGCAGTCCAATTTATCAGTTTTTTTCTCTTCATGTGAAATCATTGCCTAAAGTCATAAAGATATACTCCTGTGTTTTCTTCTAGAAACCTTATTGTTTTAACTTTCACATTTATATCTATCATCTATCTCAAATTAATTTTTGTGTATGCATGAACAGAAGTTTCTTTGCTTTGGTGTAGATAAGTTTATGATTTTCTACCTCCTGGTTAGCACCTCTTGAGTCCTAGTTAGGAAATCTTTAGCTGTGCTAAAGTCATGAAGCTAGTAGGAGACTTCACTTTTTTAAATAACAGTTTTACTGAGATATATATAATTCACATGTCACACAATTCATCCATATAAAGTATATAATTCCATGATTTTTAGTATATTCATAGAGTGCACCCATGACCACTGTCAATTTTAGACCATTTTCATCACCCCAAAAAGAAACTCCATACACACTGGCAGTTACTCTCCTTTTTCCCAACCACAAACCTACTTCTGTCTCTATAGATTTGCCTATCGTCACTGGACATTTCTATCAGAGGAATCATACGGTATATGACTTTTTTTTTAAACTGATTTCTTTCACTCAACATAATGTTTTCAAGGTCCAACATTATAGCATGGATCACTACTTTTTATGACTGAATAATATTCCACTGTATGAATATGTAACATTTTGTTGATCCGTTCACCAGTTGAAGGACATTTGGGTTGTTTCCACTTTTTGGCTCTTACAAATAATGTTGCTATGAATGGTCACATCTGAGTTTCTTTTTTTGAGATGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGCAGGGTGTCGGCTCACCGCACTCCGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCACGCCCGGCTAATTTCTGTATTTTTAGTAGAGACAGGGTTTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGACCTTGTGATCCGCCCACCTCGGCCTCTCAAAGTTCTGGGATTACAGGCATGAGCCACCGTGCTCGGCCACGTCTGAGTTTCTATGTGGACATATGTTTTCATTGCTCTTGTAAGGAGCCTTCATTTTTAATCAGACACCATGAGATTCAGTGATATCATGTCTATATGTCTATTAAGCCCTGGCACAGCCTAAGTGCTCAATCAATCATAGCTGTATACAGGTTAGGAAGTACTGCACAGCATGGAACACCCCAGTGTAGCTCTTCAGACTGTGGGAAGCTGAAGAGTGAAAATCTGTATTATCCCCACCCAAGCACTGGGTCCCCAGCACACACGTCTGCTCACAGGCAAATAAGTGCTTGGACAAGGCTCCATGTTCTTTGCAGGTCAAATTGTGCATAGATAGTGGCACAGCAGAGGCGGGTGAAAGAAGGAGTCAGGAGACCTGGGCCTGGCCCTGCTAAGCTGCTAATTGGAGTGTGGTCTCAGTTTCCCTACTCAGAGCGTGGACATGGGACCACTGATAGTTCTAGCCCTTGTGTGTGGCTCACTTGGCATCTTGTCCACTCCCCAG
Seq C2 exon
GCAGTGGCTCTGCCAATGATCCTGTGAGTATTCAGGAATCACTGTTGCCCCTGGGGATCCTTGTCCTGGAGTGGCCCACCTGCTTGCCCCCAGCATGGCGTCCGACACTCCCGAGTCGCTGATGGCCCTCTGTACTGACTTCTGCTTGCGCAACCTGGATGGCACCCTGGGCTACCTGCTGGACAAGGAGACCCTGCGGCTACATCCGGACATCTTCTTGCCCAGCGAGATCTGTGACCGGCTCGTCAATGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000160445-ZER1:NM_006336:1
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF072589=HCaRG=PU(21.7=43.4)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)