MmuINT0178378 @ mm10
Intron Retention
Gene
ENSMUSG00000039686 | Zer1
Description
zyg-11 related, cell cycle regulator [Source:MGI Symbol;Acc:MGI:2442511]
Coordinates
chr2:30113246-30124582:-
Coord C1 exon
chr2:30124276-30124582
Coord A exon
chr2:30113482-30124275
Coord C2 exon
chr2:30113246-30113481
Length
10794 bp
Sequences
Splice sites
5' ss Seq
AGGGTACGT
5' ss Score
9.15
3' ss Seq
GCTGCTTTTCTCCTTCCCAGGCT
3' ss Score
8.93
Exon sequences
Seq C1 exon
GGCCCGGAAGTGACGCTTTGTTGACAGCACACCCGCAGCCACAGGCTCTCCAAGCCTTCGGAACAGGATCGGGGGGAGGGGCTGGGCCCGGAGCCAAGCAGCCGGCGGCCCGAGGGCAAGGGAACGGCCTCCGTCCGGGGCTCCGGTCGCAGCATTCCCGCCCTGCCCCGCCCCGCCCCGCCGACCCGGACCCGGACCGGATCCGACCTCCTGCGGCGCTTTGGCCGCCGATTCCCCCGGGCCGCAGCCTCCGCTTGTAAGCCTGCGAAGCATCCTGTCTCCCCGTTGAGGGCCGCCCCCTCCTAGG
Seq A exon
GTACGTCCTAAATGCCGAGCCAAGAGACGTACCTGCATCCTTTTCTTCACCCTGTCTCAGGGTCTAAGCATTGTCGCTGCGACTCCTTGCAGAGGTCCACCACAGGCTAGTGGTGGGATGGCGCTCGTCGCCTGCCACCCAGGTCTGAGGATTTTGCCTTGAAAATTGAGCTCTCTCTAGAATGAGAACGACGCTCGCCCTTGCAAAATGGGGGCTCAACGTAGGGCTTAGGAGGCCAGCCTCTGCCCCTCCTACCTGTTGGATGAGTTTAGGTCTTCTCCCAACCCCCGAAGCCGTGCTACTTAAAAGCTTAGGGATGGCTTGGCTCCTGGATCAGCTCCCAAAATGCGATGCCAAGGTACAAGATAGTGCAACAGGGTCGGAAAAGAGCGGGTGGGCTTGCTGAAGATCAATGGCTCCCATAGGTGAGGTGAAACTAAAACTGACCGCTCTGGCTAGCTCTGGGTAGATTTAGCTGCTCTTTAACCAGTCAAAGCTTCCCCGGGTTTGCTTGTGCCTTGTGTGTATGACAGAGACGGGAGGGGGAGCAGAGGGTTGGGGGTAGTGGTGCCTAATGCCTGGGAAAAGCTAACTCAATGATGTTTCTGACAGAATGGTTCTCTACAGGCTTCAAGTTAGAGTGACCGGTGGAGATAGCATTGAAAGGGGGGTCACAGAAGCTATGCTTTGACCAAGAGGTTCTTGTTAGGTATGAAGGGTCGATGTGCTTTGCCTTATTCAGTAAATAAACGTACAACATGTTTGATAGTAATAGGTGTCACGAAGCAGAGACTGGGACCTCTGTATAGAATGGTCAGGGAAGGTCTCTAATGAGGTTTCTGTCTGAGCAGAGATGAGTGAGGTAGAAAGTCATTACAGCTTTCTGGGGGCTCAGCATTCAGCAGCAGGCGCAAAGATCCTGTGGTGGCAAGAGAACCCGCTTGGGTCTGAATGAAGGAGGCAGAGTGGGTGGCAAGGAAATCAAGTGAGAAGAAATAACCGCAGGGAACATATTAGGGACTGGCTTGTGATGCAGGGTTGATTTGTAATTTTTGAAATGTTGGAGAAGAATCAATTGTCTGAGGTGACAAATGACCAATGTACTTCAGCCCTGTGTTTTAAGTGCCCTCTTGCTGTCTGTACTGAACATCCATGGCAGAAATTAAAAGAGATTTCTGCGGGAAAGTCATGTCACATTACTGTTTCCTCGTAGTTAGAATGTGAGCAGGTGACCTTCTGCCTCGGTCTTTCCATCTGTAGAATAGGACTGCTAAGCTACAGGGTGCATGTGTGGCAGTGTGGTACATGACAGGAGGGATCCACCCACGACACAGTCCTGCAGCCCTTCTTTCTAGCATCAGCTGGAGGCATCACCAGCTCTGTCTGACTCCCCTGGCTCATAGGATTTGTAGGAATACTGGGGGAAGCTAAGTAGAACTTTATGACACCATTCACTGGTAAAAGTAATGGTCTGTTCTTCGGGGTATCTGTGACCTTGGCCTTGATTGTTTGTTGTGTTTGTTTAGACAAGTTCTCACTCTGTAGTGAGACTGGCAACGGCCTGTGGAATCCAGACTGAGCTTGAACTCAGCAGTTCTCCTCAGCATCCCAAAGGCTAGGACTGCAAACAGGAGCCACCAACTCCAGCTGGTGGCCATACATACATACATACATACATACATACATTTATTTATTCATTTATTTATTTAGAGGCAGTTTCATGTAGACAAGGCTGGCTTCAATCTTGCTATGTGGTCTTGAATTCATAGAGCTTGATCTGCAACTGCCTCCTGATACAGTTCCATCAGATTATATGTGTGTACCACCATGCCTGACCCAAAAAGGACTTTTAAAATCAAGCCCTGAATATCCCCATTCTGTAACATAATATAAGCAAAACGATGTCTTCCAGACAGATTGGAAAAGAACTGTGTTGGACCTATCTGTGGCACTGAGTGTGTGATCGAACTTCAGGTAGAGGCTGTGAATTCTGAAGGCCCCTGGCACAGGCTGAAAATCTGCAGCCTTTGAGGAGAACAACTCCAGATCTTCTCAGCCCTTGAACCTGACTACATCATCAGGCCTGTGCTATTGGCTGAGCAGGGCCAGAGGATTTGAAAATGCAAGGCCAAGGGTCAGAGGCTATGGCTGAGTGATAGAACACTTGCCTAGGGTCCATAAACCCCTGGGGCCCACCCCATGCACCACAAAATTAAGTAACATGTAAATGTGTAAAGTCAGTGATTAGAAGACAGGAGCCTCAACGGCAGAGAAAGCTTCTCTGACCAGAACCCCAGACTAGCACTGTGGTGAGCCAGGGCCTAGCACAGTTCTGCTGCCAGCTTATTGTATATAGTTACGTGAATCTGTTGCTCCTTCTGAACCTCGGTTTTCCCTGCTTTACGCAGAGAATGGTGTCCTCCTGCCCCTGCTGACCCTGGAGAGAGCGGTAGGATGAAACCAGACACTGGTCAGAGAAGAGTTTATCCTTCACTCATGCTCGCAGTGGTGAAGAACACTTGCTGTTACCGTTCATGCCACTGGGTTCGTACAGGGGCATCTAGGGCCCACATGCTCAGGGCCCACTTTGCCTCCAGGTGTTCGTTTGTGTTTAACAGTTACTTAGGGAAGTACCACAGCACATTTGTGGAGGCCCGAGGACAATTTATAAGAGTTGTTCTCTTTCCACCATGAGGGGCCCGAGGCTGAATGCAGGCTTTCAGTCTCGGCAGCACTAACCACTGAAGCATCTTACGGTCTTGCCTTTGGTGGGTGTGTTTCGTTAGCCTCACTGCTGCAGTTCTTGATTCCAGGAATGTGAGCTCAGAAACCACTATGGAGTCAGCTCTTTGGGGACCAACATCAAACCTGGTTCATTCACTAGAGCTGGGTTTCTGGCTTCAGAAGTGAGCAAAGTCCTGGGGATATGGCTCAGACTGTAAGCATGCTTGCAAACACGAGGACCCAAGTTCAATCCCCGGCACCCATATACAGAAGCCATCTGCTGACATGCACTGGTAATCCCAGAGATGGAGAGACAAACGGGAGGATCCCAGCTAGCCCAACATGTGCTCTTTAATATACAATGGAGGTCCTGTGACTTGTGCACGGTCCCTACTTTTAGGAAGCTTCTAGCCCTGGTCCATGGTGCCCATAGAATCATTACCAGAAAACCAGATCATCTGTGGTCAGTGCTCAAGGATGCTTGGAGTTGTAAGGAGGTTCTGATGGCAGAGAAGAGAAAATGAGGCTTGCCCAAGTCGCTGTAGGCGGCACCTCCGAGAACAGACCTGGAAAGCTGGAAAGCCCAGGTCTGACCTACTGAGTGGAGAGCGCATATCTATGTACTGTGCAGACTGCTTGGCACACAGCCTCAGATGCCACACCTGCAGGCTGTAGATCGATCCCTGCCTCCTGGGAGGATGAAGGGAGCCAGTGGGTATCCAGGGCTGAGCAGTGTAGGCACTAGGAAGTTTGACTACACAAGCAGAACCCAAGCAGCCTGCCCCAGTGTTCTGTCCTTCCTCAGTGTGTGTGCATTGTTACTTTGTCAGGAGAGATACCAGCAGCATGCTGGGCATGTGCAGTCTTCCCCCATTCTGTGTCTTCCTAGCAGTGACCTGCAGGCATCGACTCTGTAGATGTCTTTCTCTAACCTCACTTGCACCTCTGTCCCCGAGAGTCCCCTGACACTTGTCTGGACTATCGACACAGCAGCGTTCTGTCCCTAATCTCCAGCCTGGGACCTATTCCTTCCTGGAAGACATTCAACCTCTATAAAGAGGGTTCCCAGAGCTCATGGGTTAACATTTCACAGGATGGGCACTGCTCCAAGGTTTGGATCCTCTGGCTCCCCAGAGTCTCTCTTCCTAGGTGTCAAGATGTTGCTGTGGTCCCTTGCTTCCTCCTCTGAACATTGGTTACTCTCTTATTCATTTATCATTTTATTTTTATTTTGTGGTTTTTTTTGAGACAGGGTTTCTTTGTGTAACAGCCCTGGATGCCCTGAAACCCTCTGTAGACCAGGTTGGCCTCAGACTCAGAGGGACCCACCTGCCTCTGCCTCCCAAGCACTCAGACTAAAGGTGTGCATCACCATGCTCAGCTAACTCTCTCTCTAGCTGGTTGACTGGATGAATGAAGCAGTGTGGTTGGTGAGCACTTTAGATGTACAGAGGTGTCATCTCAGGCTCCTTTTGTGGGACTTAGGGTTCTCCGTGTCGTCTTCAGCAAGTGACTAGCCGTCTCTACCTCAGAGTGCCATCGTGAGGTGATACTGGCAACAGCAAACCTTTGTTCCGCCTAAATGCCAGGCACTAGTAGGCACAGAGGATGTGGGGGTGGGTGCAAGCCGCCAGTCTGTCCTCTGGAGCTGGCAGCTGGGGGGAGGGTCATAGACAAATTGTTATGCAAATGAATGGGTCTCTATTGGTACAGAGTACTGGGCTGTGATGTTTGGCTGGTTTAAATAAGAAACTGTAGGAAGTAAATTCTGGAAGGAGCTGGGTATCCCTCAGGAAGCACAGAGGATGGAGGTGGTACAGCACAGCGGGGGTGGCTGCCTGGGCTGCTGTTGTTTTTCTCCATCTTTTCTTCCACTGCCCTTCCCCCAGCATGTCTTAACGAGCCTGTAAGAAAAGAGACATGGGGTTCTTCTCTGGTTGTCTAGCAATTTCAGAGTCCAAACTGTCTCCAGTTGCCAGAATTCCAGATGGCTGGAACCTGCCTTGAGAGTGGAAACCCTTAAAGGCTCCAAGGGGTGGAGTGGTAGGGTGTCGTGAGCCTCTAGGCTTTGGTTCCAATGAGGGCAGCTCCTTCCTCCCCAGCTCACCCAGATCCCCCATAGCCCTGACCCCTTCAAAGCTGTAGGGTCGGCTCCTGGAGGAGGTGAACACAGGTGACACCATTCACCAGTCTGTTCTCTGGAGGCCTTTGGTGACTTGGGCAACTGATATTATGGTGTCCCTTCCATGTGTGCAGCCCAGCTAGCGCAGGGTAGCTACCTGGGGCCAGGGCTCAGCCCTGCAGAAAAGGCAGTTCTTTCCCAGCCAGGCACAAGGTTCTACCTTGGCCCATAGGGATTCAGCAGTATTCTGGGGACAGTGAACTCACGCTCAGCCTCATGAGAATCGCATCCTGCCAGTCCACTGTGACTCCTGCCATGGTGTTTGTTGTTGAAACTTCCCTTTCCCCAAGCCCCGCGCTTAGTATTCAGTACCAACTGTGTTCATTTCCCAGGAGCCATGGATCTGGGCTCTCAGTGCCTGCATCCTCTGTACCCCAAGCTCTCAGCCATTGCATGTGTCTTCCTACCTCGAGCATTCAGAGCTAGCTAGGACTCATCTCTGTGGTCTTAGCTAAAATGTCAAACCTTCCCTGATGCTCCAGCCCAGAGTGACAGGGACCCTTCCTCTGTCCTTCAGAGCACTGTTCGTGAGATGTGACTGTATCTGGGTTCTTTTTAGGTAGCTGATTGTCTCCTTCTAGTGCCAGAATGTTTCATAGAGGCAGGACCTTGTCTGGTTTGCTCATTATAGGACCTGTGTCCTCAGTAGCTCATGGCTAGGTCCATAATTACTACAGGAACAGTCAGCTTGAAGGACTAGCCTGGTCTACAGATTGAGTTCCAAGACAACCAGGGCTACACAGAAAATCTGACTCAGGGGAGCCTCAGCAAGACCCTCCTCATGGGGTAGGGCCTCCCTAGACATTGGGATGGTAGAATGGGCTCTGTAAGAGGACTTAGTTCATGCTTTGTAGAGGCAAGATACTCACTGATTGGAACTGGACAGTCCTAGCAGATGGAGGGGTTACAAGTGTGGGGCCACAGGTGAGCAGGCCTGGGGCTCTTGCCATCCTGTGGAGGGGGTAAACTAGAGAGGGTCCAGGAACTAAGGAAGCTGGAAAGCTGGTCCCCAGCAGGGCTGGCCTCGCTATGCTGCTCCCTCTGATGTCATTAGGCTGAAGGCCAGGCTTAAGGGGTCTGCAAGTGAGGAAGGTCTTAGGGCTGTCCAAGAAGTCCATTTGTGCTATCCCCAGAGAGTGTTACATTTCCACTGGGCCGGGTGAAGCATGGGTTGTGTGGGAGGCCTGGGTCTAGGGAGAACAGACCCTACTTGACATAGAAGTGAGAGCAGTGTGGCTAAACGTGGCTGTGGCAATCCTAATAGCTGCTTTTAAAGAAAAAAAGAAGGCTGGGCGTGGTGGTGCACACCTTTAATCCCAGCACTCAGGAAGCAGAGGCAGGTGGATTTCTGAGTTGGAGGCCAGCCTGCTCTACAAAGTGAGTTCCAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTCGAAAAACAAAACAAAACAAAACAAAAAACAAAAAAGAAAAAGTCAAAATACCAGGGCCTTAGAGCTGGCGCTGCAGTTAGGAGTACTTGTTTGCGACCCAGTACCACATAGTGTCTCACAAACACCCATAACTCCAGTTCCAGGGGTGCCGTGACATCTTTTGCCTTCAAGCACCAGGCAGGCATGTAGTCCATGAACATACATGCAGGCAAAATACTCACACATCTCAAATAACTTAAGTACAGCTAAGAAAAAATAACTGTTTTAAAGTACATACTATTCTTACAGAGACCTGAGTTCAGTTCCCAGCACCTGCATCAGGCAGCTTGCAGTGACCTCAAACCCCAGCTCTTGGGGTTTTGGCATTCTCTTCTGGCCTCCATGTGTGTCTGTTCTGTGAGCATGTATCTCCCCCCTACACACACGAAATGTAAGTTAGTTTTAGGGCATAATGGCCCATGCCTTTAATTCTCCTAGCTCCGTGTATTAATTATACATACACATATATGTATACATATACATATATAGATAGATGTCAGATCACCTGGAACTGGAGTTACAGACAGTTGTGAGCTGCCATGTAGATGCTGGGAATTGAATCTAAGTCCTCTGGAAGAACAGCCAGAGCCCCTCTCCCTTTTTTTTTTCTTTCCGAGACAGGGTTTCTCTGTGTAGCCCTAGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTTGAACTCAGAAATCCACCTGCCTCTGCCTCCAAGTGCTGTAATTAAAGGCGTGCACCACCACTGCCCGGCTCAGCCAGTGCTCTTAACCACTGAGCTGCCTCTCCAGCCCCCATTTTTATTTTATTAATATGGGGTTTTACTAAGTTGCTCAGGTTGGTCCTGAACCAGTCATCCTCCTATCTCAGCGTCCCCAGTGCAGGCAATGTTGTCTCTTGCCTCCTGTCCTGAGTAGCTTAAAGGGCTCAGGAGTGGACATAGAAGCTAAGCCCATACCCCATTTGGAACCTTCCTCTAAGGCTGTGGTTCTCAACCTCCCTAGTGCTGTGACCCTTAAATATAGTTCCTCTTGTGGTAACCCCCAATCTTAAAATAATTTTCATTGCTACTTTATAACTGTAATTTTGCTTCTATGATGAATTATAATATAAATATCTATGCTTTCCAATGGTCTTATAACCTGTGAAGGAATCATTCCACCCTCCCAAAGGGGTCAAGACGCACAGGTTGAGAAGTGCTGTTGTAAGGACGGAGCCAGACACCAGTTTGTACAGTGTAGCCTTGAGTCTCTGAGCTCGCACATCCTTATCTGTCCCACGACCAGAGCTCATGCACTGTGTGCCGTGAGCAGCACTATCCCCTCAACTCCTCCAGCCCTGGAGAAGAGTTATCATCCTCATGTTTTCCAGCTGAGGACACTGTGGTCTGAAGAAGTGACATTGTTTACCAGTAAATTCTGGAATGGAGTCAGAACACAGACCTGTCTGTCTGACCTTAGCACCTGTGCTTTTGGGTAGATGTTGGGAATTCATTCCAAATCTCATGTGGTAAGCATGGGCTGTACTACATCTCAGAACACTTAAACTTGTCTCAAGTTCAGTATCACAAGGGATTGAGTTGAAGACTGGGTTGGGTACCAAAATCCACAGATGCCCAAGGTGTTTATATACATAGTACATAGTACTCACACAGAGCCAAGCTTAGGTTGATCTCTGCAAGATCAGTATGCACTCTAAACTACTGTACCATCTCCAACCTGTAGGAACTGTTTCTTGTTCACCTAAGTGCAATATGAAGATTCAGTTCTGCAGCCATTGTTGACACTATATTAACTTGCTTAGCACTGGAATGCATCCAGATCTCTTCCAAGTATGGATCCCTTTGATTGGTCCCAATGTTTTGGTTTGCTGTTTGAGACTGGTTTTCTCTGTGTAGTCCTGGCTGGCCGGAGCTTTCTGTATAGACCAAGCTGGCCTTGAACTCATAGTTAACCACCTGCCTCTGCCTCCCAAGTTCTAGGACTAAAATGTGCCACCACACCTGGCTGGCAACAACCATTTTTAATCTCTTTATAGAATTCTAGTATTCTCCACTGTGAGACAACTCACAATGGAGACAACCTGTGAGTCCACGGAGAGGAAAGACCCAAAGCCCATCTGCACCCAGAAACTCCCCTCAAGTGTACACACATCCTTGCCAAGGACGCAGGCCTGTCCCAACATAGACCTCCTATGTATTAGCAGAAGGGAGCACGCCTGGAGCAAACACAGTGTCCTCTTGCTTCTGACTCCTTCCTGTTACACTCTATGGGTCATCCAAGTGGTTGACTGTGTTCTCAGTGCTGTGTGGCAGTGAATTTACTGTTTTTATCCCCTGCAAATGTCAGTGGACATTCACGGGTCTCTTCTTCTGGAGGCCGTCACATAGAATATTGCTTTCAATATTTAGTGTGTTTTCAAAGTTTCATTTATTACTAGATATGTGTAAGAATGTAGGTATGTACCTGCCACAGTCCCTGTAAGGAGATCAGAAGGCAACTTCTGGGTGTCTGTTGTCTCTTCCACTGTGTGTTCTGGGGCTTGAAATCAGGTCTGCAGGCTTACATGGCAGACACCTTTACCCCCAAGCCATCTCACTGGCTCTGTTTGCACACTCACACAGCACCTCTGTTGGGTATGGTCCTGTGGGCAGACTTGCTGAACCTTGAAAGCACATTCCCGCTCAGCAGTCAATATTGTTGAGCATCTCCAGTTACTGCTCGAGTCACACTGCCTTACAGTCCCACCAGCATCCGTATCTTCACCAGGGCCTGGTGTCTGCAGTAGAGCTGGCTGGCTGTGGGAAAAGGCATCTCATTGTGGGTTGGTGTACATTTTGCTGATCCTGATGGAGGCAGCCGTCCTGAAGGAGGTACCTGTGCTGGTCTCCTGCCTGCCTTTACGCTGGTGCGTGTGCTGCACCTCTCCTCCTGGGCTACAGATGCTGCCTCTGCACCGCCATGCCTGGCTGGGGCCAAGCATTTTCAAATCTCTTTACTGATGTTTAATATACATGCGAATGTTCACAGTGAAGACAGCTGTGGGTCCACTCAGAGGAAGGACCAGATATGCTTTGTAGTCTGTGGCTCCCTTCTCTTCCTCCTCCTTCCTCCCCTCATTCCCCCTTCCTTCCCCCATCTCCATTATGCTACCTAGGCTTGAATTGATCCTTTATTTATTTATTTATTTATTTATTTATTTTTTCCAAAACAGGGTTTCTCTGTATAGCCCTGGAACTCACTTTGTAGACCAGGCTGTCCTGGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGCCGTGCGCCACCACGCCTGGCTATAGTGTATTTGGAACTAACTTTTGTATATATATGAACAGAAATTTCTTCACTCCAGTGCATACCAGTTCAACTTTTTCTCCCTTGTGATTAGCATTTTGAGGTCTGCTAAAAAATCTTAGGGGAGGCCAGAAGTGGTGGCGCATGCCTCTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCTCGAAAAAAAACAAACCCCCCCCCCAAAAAAAATTAAATTTAATTTTAAAAAAGGGGGAGGGGGAAAGAAAGAGAGAGAGTGCAATCTTGGGGAAGTGTCCTGAGAGGCGGCTCCGTTGCTCCCAGCACTTGCTTTTGCAGAGTACTTGGGTTTGGGTCTCATCTGCACATGGTGGCTCACAACCATCTGTAATCTGAGTTCTAGGAGATCTGATTTCTTTCCTGAGCTAATTGGGCACTGCATGCCCCTCGAATTGGAATTCTAGTACCATGTACGTTCTGGGAATTGAACCCAGGGCCTATGCAAGCGTAGTAGATGATGCTCTTAACCAGCAAGCCATCTCTCCAGCCATCCATATTTTACATTATAAAGTAACAGTTTCAGTGCAATTCACAGGAGGCGCAATCCAACCATTTGAAGTATCCAGTTCCATGGTTTTCAGTGGATACAGTGTCAGTACTCCCAAAGGAAAGCCCATCCCAGGAGTGGTCACTCTGTCCCCCAGGCTGTCCTCCCTCCATCTGTAGACTTTTCCTTTGTGGTTGCACAGCCCAAGGACTGTGTTGTCACCTTCATAATTGGTTCCTTCAGTTAGCATGACCCAGTGTTATATGAGAACTTTTTGTGACTGGATGATATTCCAACTTTTTATTTAGTCAGGGACTCAATCTGAGCTCAAAAGCTCAGGCTGGTCTGGAATTCCTGATCCTCTTTGCCTCTGCCTCCCAGGTGCTGGGATTACAGGTTTGTACAGCCTAAATTTTAAGGTCCTGATTTGAATGTGATGGATGGATGGGGCTCCCCATTCACCAATCAAGAAGTAGACACAGGTTCTTATCTGCATCTCATTTGGCTGCTTTTCTCCTTCCCAG
Seq C2 exon
GCTGTGGCTCTGCCAATGATCTTGTGATTATTGGTAATCCATAGTTGCCCTTGTGGGCCGCTGCTGCCGTCTCCCAGCATGGCGTCTGACACGCCCGAGTCCCTGATGGCCCTCTGTACTGACTTCTGTCTCCGGAATCTTGATGGCACCCTGGGCTACCTCCTGGACAAAGAGACCCTGCGGCTGCATCCAGACATCTTCTTGCCCAGTGAAATCTGTGACCAGCTGGTCAATGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000039686:ENSMUST00000113677:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types