RnoINT0167576 @ rn6
Intron Retention
Gene
ENSRNOG00000025832 | Zer1
Description
zyg-11 related, cell cycle regulator [Source:RGD Symbol;Acc:1310284]
Coordinates
chr3:8678342-8690305:-
Coord C1 exon
chr3:8689991-8690305
Coord A exon
chr3:8678577-8689990
Coord C2 exon
chr3:8678342-8678576
Length
11414 bp
Sequences
Splice sites
5' ss Seq
AGGGTATGT
5' ss Score
8.34
3' ss Seq
GGCTGCTTTCTCCTTCTCAGGCT
3' ss Score
8.68
Exon sequences
Seq C1 exon
GGAAGTGACGCTTTGTTGACAGCACACCCGCAGCCACAGGCTCTCCAAGCCGTCGGAGCAGGATCGGGGGGAGGGGCTGGGCCCGGAGCCAGCAGCCGGCGGCCCTCAGCCCAGCCGGCGGCCCGAGGGCAAGGGAACGGCCTCCGTTCCGGGCTCTAGTCGCAGCTTTCCTGCCCTGCCCCGCCCCGCTGACCCGGACCGAGATCGGATCCGACCTCCTGCGGCGCATTGGCCGCGGATTCCCCCGGGCCGCAGCCTCCGCTTGTAAGCCTGCGAAGCATCCTGTCTCCCCGTTGAGGGCCGCCCCCTCCTAGG
Seq A exon
GTATGTCCTAAACGCGGAGCCAAGAGACGTACCTGCATCCTTCTCTACCTCCTGCCTCAGGGTCTAAGCATTGTCGCTGCGACTCCTTGCAGAGGTCCACCACAGGCCAGAGGTGGGATGGCGCTCGTCGCCTGCCGCCCAGGTCGGAGGATCTTGCCTTGAAAATTGAGCTCTCTCGTTGAGAACGACGCTCGCCCTTGCAAGATGGGGGCTCAACGTAGGGCTTAGAAGGCCGGCCTCTGCCCCTCCTACCTGTTGGATGAGTTTAGGTCTCCTCCCAACCCCCAAGCCGTGCTGCTTAAAGCTTAGGGATGGCTTGGCTCCTGGATCAGCTCCCAAAATGGGATGCCAAGGAACAAGATAGTGCAACAGGGTCGGAAAAGAGCAGGTGGGCTTGCAGGCTGAAGACCAATGGCTCCCATAGGTGAGGTGAAACTGAAACTGACCTGCCTGGCTAGCTCTGGGTTGAACTTAATTCAGCTGCGCTTTAACCAGTCAAAGATCTCCCGTGCTTGCTCGTGCCTTGTGTGTGTGACAGGGGCAAGGGTGGGTTGGGGGTGGCGTTGGGGGAGGGGGCGCCTAATGCCTGGGAAAAGCTGGCTCAATGATGTTTCTGACAGAACAGTTCTCTTCGGGCTTCGAGTTAGTTAGAGTGACCATAGCATTGAAGGGGTCACAGGAAGCTATGCTCAGACCAGTTGGTGCTTGTTAGATGTGAATCAGGGTCGCTGTGCTTTGGCTTACTCGACAAATGAACGTACATGTTAGCTAGTAATAGGTGTCACGAAGACACGTAAACAGACAGACACTGGGACCTTTGTATCCAATGTGGTCAGGGAAGGTCTCAGATAAGGTTGCTGTCTGACCAGAGATAAGTGAGGTAGAAAATCATTACAGCTTTCCGGGGGCGCAGCATTCAGCAGCAGGTGCAAAGGTCCCGTGGTGGCAAGAGAACCCACTTGGGTCAGAATGGAGGAGGCAGAGTGGGTGGCAAGGAAATCAGTTGAGAACAAATAACAGCCGGGAACATATTAGGGGCTGGCTTGTGATGCAGGGCTGTAATTTTTGAAATGTTGGAGAAGAATCAAAATTGTCTGAGGTGATAAATGGCCATTGTACTTCAGCTTTGTGTTCTAAGAGCTCTCTTGCTCTCTGTACTGACCATCCATGACAGAAATCTTAAGGAAAAAAAAATTGCACTGTGGGAAAGTCGTGTCACACTGCTGTTTCCTTGTTGTTAGAATGTGAGCGAGTGACCTTCTGCCTCAGTCTTTCCATTTGTAGAATAGGACTGCTAAGCTACAGGTGCATGTGTGGCAGTGTGGTATATGACAGTAAGGATCTTCCCATCATACAGCCCTGCAACCCTTGTTTCTAGCTTTGGCTTGTGGCATCACCAGTTCTGTCTGACCCCGCTGGCTCAGGATTTGTAACAGTACTGGAGGAAGCTAGAATTCTGTGACACCTATCACATGGTCTATTCTTCAGGGTATCTGCAAACTTGGCCTTGATTTTCGTTTTGTTTTGTTTGTTAGATAAGTTTTCATTCTGTAGTGAGACTGACAACTCCCTGTGTAGCCCAGACTGACCTTGAACTCAGCAGTTCTCCTCAGCATCCCAAAGGCTAGGACTTCAAACATGAGCCACCAACTCCAGCTGGTGGCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGTGTGTGCGCGCGTGTGTGCGCATGTTTGTGTGTATTTTGAAGCAGTCTCATGTAGATAAGGTTGGCTTCAGTCTTACTGTGTAAAACAGTGTGGTCTTGAATTCATAGAGATTGACCTGCCCCCTGATATAATTCCGGCAGATTATATGTGTGTACCACCATGCCTGACCTGAAGATGATTTTTTTAGATGTATTTATTATTATATTTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGGCTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCGTCTCTCTAGCCCGCCCAAAGAGGACTTTTGAAATCCAAGCCCTGAAAATCCCCATTCTGTAACATAATGTAAGCAAAATGATGTCTTCCAGACAGATTGGAAAGGACCATTGTTGGGCCTATCTGTGGCACTGAGTGTGTGGTCAGATTTCAGGTAGAGGCTGTGGGTCCTGAAAATTTGCAGCCTTTGAGAAGACTAACTCCAGATCTTCCTCCTCACCCCTTGAGCCTGTCTGTCATCAGGCCTGTGCTGTCAGCTGAGCAGGACCAGAGGATTTGAGAATGCAAGGCCTGGGGCAAAGGATATGGCTGAGTAACAGAACGCTTGCCTGGCATGCATCCCATGTACCACAAAAACTAAGTAACGTATAAATATGTAAAGTTAGCGCTTAGAAGACAGGAGCCTCAATGGCAGAGCAAGCTTCTCTGACCAGAACCCCAAACTAGCCATGTGGTGAACCAGAGTCTCGCACAGTTCTGCTGCCAGCTTACTGTATATATTTATGTGAATCTGTCCCTCCCTTCGGACCTCGGTTTTCCCTGCGTTACACTGAGAATGGTGTCCTCCTGCCCCCGCTGACTCTGGAGAGACACTGGTCAGAGAAGAGTTTGTCCTTCACTCATGCTTGCCATGGTGAAGAATACTTCTCGTTACAGTTCGTGCCACTGGGTTCATGCAGGAGCAGCGAGGGCCCACCATGCACAGGGCTACTCTTTGCCTCTGGGTGTTTGTTTGCTTTTAACAGTTACTGAGGTACCACAGCACATTCGCGGAAGTCTGAGGACAATTTATGAGAGTGGGTTCTCATTCGACCATGAGGGACCCGGGGCTCAAACTCAGGTTTTCAGTCTTGGCAGGTGGCACCGTTAACCACTGAGCATCTTGCAGACCTCTGCCTTTGGTGGGTGGGTTTTGTTTAGTCTCAGTGCTTCAGCTCTTGATTCCAGAAATGTTAGCTCAGAGACCCCTGTGGAGTCATCTCTTTGCGGACCAGCATCAAACCCGGTTCATTCCCTGGAGCTGGGTTTCTGGCTTCAGAAGTGGGCAAAGAGCTGGGGATGTGGCTCAGAGAGTAAGCATGCTTGCAAACATGAGGACCTGCATCCAATCCCCAGCACCCATATACAAAAGCCATCTGGTGACCTGCACTTGTAATCCCAGAGATGGAGAGACAGATGGGAGGATCCCAGCTAGCCTGACACTCACTCATTAATATATAATGGAGGTCCTGTGACTCGGGCAGGGTTTCTACTTTTAGGAAGCTTCTAGCCCTGGTCCGTGATCCCCATAGAATTATTACCACAAAACCAGATCATCTATGGTCAGTGCACAAGGATGCTTGGAGTTGTAAGGAGGTAGTGATGGCAGAGAAGAGGAAGTGAGGCTTGCCTAAGTCCCCATAGGTGGCACCACAGGGAACAAACCTGGAAAGCCAGAAACCCCAGGTCTGACCTACTGAGCAGAGAGCATGCATCTACATACAGACTGCAGAGGCTCGGCTTGCAGCCTCAGCGCCACACCTGCAGGCTGTAGATAGACCCCTGCCTCCTGGGCAGATGGAGGGAGCTGGTGTATAGCCAGGGTAAGCAGGTGGGCATTAGGAAGTTTGCACAACCAACCTGCCCCAGGTCCGTCCTTCCTCAGTGTGTGTTCACTGCTTCTTTATCAGGAGAAATACCAACAGCCTGCTGGGTCTGTGCAGTCCTCCACCATTCTGTGTCTTCCCAGCACCATGACCTGTAGGCGTAGCCTCTGTAGACGTCTATCTCTACTCCTCACCTGCACTTCTCTCTCTAATCTCCAGCCCAGGACTCATTCCTTCCTCGAAAGCATTCAGCCTCTATAAAGAGCGTTCCCAGAGCTCATGGGCTAACATTTCACAGGGTAGGCACCGCTCCAAGGTTTAGAGCCTCTGGTTCCCCAGATTCTCTGTCCCTAGGTGTTGAGATGTTGCTATGGCCCCTTGCTTCCTCCTCTGAGCTTTGGTTACTCTCTTTCTCTTTTATTTCTTTATTATTTTATTTTATTTTTTTATTTTTGAGACAGGGTTTCTTTTGTGTAACAGCCCTGAATGCCCTAGAACTTTCTGTAGACCAGGTTGGCCTCCAACTCAGAGGGACCCCCCTGCCTCTGCCTCCCAAGCACTTGGACTAAAGGTGTGCACCACCATGCCCAACTAACTCTCTCTCTTAGCTGGTTTGCCGGGTAAACGGAACAGTGTGATTGGTGAGCGGTTTAGATTTACAGTGTTGCTGCCCCAGGCTCCTCTATGATAGTCGTGGTTCTGGTGTCTTCTTCAGCAAATGACAAGTGGTCTCTACCTCAGAGTGCCATCGTGAGGTAATACTGTCAACAGCAAACCTTTGTTCCGCCTAAATGCCAGGCACTAGTAGGCACTGAGGATGTGGGTGTGGGTGTAAGTCGCCAGTCGGTCCTCTGGAGCTGGCAGCTGGGGGGAGGGTCACAGACAAATTGTTATGCAAATGAATAGGTCTCTATTGGTACAGAATACTGGGCTTTGCCGTCCGGCTGGTTAAATAAGAAACTGTAGGAAGTAAATTCTGGAAGGGGCTGGGCATGTATCTGGAAGCACAGAGGACGGAGGTGGTACCGCGGGGGTGGCTGCCTGGGCTGCTGTTGTTTCTCTCAATCTTTTCTCCCCCTGCCCTTCCCCCAGCATGTCTTAAAGAGCCTGTGAGAAGAAAAGAGACATGGGGTTCTCCTCCTCTGGTAGTCCATCAATATCAGAGTCCAAACTGTCCCCAATTGCCAGAATTCCAGATGGCTGGAACCTGCCTTGAGAGTGAAAATCCTTAAGGGCTCCAAGGGGTGGAGTGGTAGGGTGTCGTGAGCCTCTAGACTCTGGTCCCAGATGAGGGCAGCTCCCCTTCCTCCCCAGCTCACCCAGGACACCCTACACCCACACCTTCAAGCTACAGGGTTGGCTCCTGGAGGAGATGAACACAGGTGACCACTCACCAGTCTGTTTTCTAGAGGCCTCTGGGAAGCTGATTTGGTGTCCCTTCCGTGGGCACAGCCCAGCTAAAGTAGGGTAGCTCCCTAGGGCCAGGGCTCAGCCCTGCAGAAAAGGTGGTTCTTTCCCAGCCATTCACGAGGTTCTGCTGTGGCCCACAAGAATTCAGTGTTCTGGGGGCAGTGAATTTATGCCCAGCCTCACGAGACTCACATCCTGCGAGTCCCCGTGGCTCCAGCCATGGCCTTTGTTATTTTTTTTTTCTTCTTTTTTTCTTTTTTCTTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTTCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCATGGCCTTTGTTATTGAAACTTCCCTGCCCCAAGTCCCACGCTTAGTACTTAGTACCACCTGTGTTCATTTCCCAGGAGCCAGAGCCTGGCTCTTGGTGTCGCTATCCTTTGTACCTCAGCTCTCAGCCATTGCACTTGGGTTCCTACCTTGAACCTTCAGAGGTTAGCTAGGGCTCATCTCTGCCATCTTAACTAAAATATCAAACCTTCCCTGATGATCCAGCTCAGAGTGACACCGGCCCTTCCCCTGTCCTTCAGAGCACTGTTCCTGAGATGTGACTGTATCTGTGTTCTTTTTAGGTAGCTGATTGTCTCCTTCTAGTGCCAGAATGTTTCATAAAGGCAGGACTTTGTCTGGTTTGCTCAATATAGGACCTGTGTCTTCAGTAGTTCATGGTGAGGTCCATGATTACTGCAGGAGCAGTCAGCCTGCAGGGCTAGCCTGGTCTACAGATCTAGTTCCAAGACAACCAGGGCTACACAGAGAAACTCTGTCTTAAAAAAAACAAAAGCAAAAGAAAAGAAAGAAAAGAAGCCAGCAGCATGACATCTGTCCTGGGTTTATCAAGGAAACCAGAAATAAACTGGCACCTGGAGTGGGCCCATGGAAGCAGCAAGAGCCTCCTAACAGGGCAGGGGTACCTCCCAGGACATCAGAGTGGTAGAATGGGCTCTGTAAGGGAACTCAGACAGTGCTGTAGAGCAGGACACTCAACTGGTTGAAGCTGTACAGTCCTAGCAGACGGAGGAGGTAAGAGTGTGGGGCTGCAGGTGACCAGGCCTGGGGCTCTTGCCATCCTGTGGAGGAAGCAGGCTAGAGATAGTCAAGGAACTAAGGAAGCCAGAAAGCTGTCCCAAGCAGGGCTGGCCTCAATATACTGCTTCCTCTGGTACCAGCAGGCCGAAGGGCCTGCAAGTGAGGAAGGTCATAGGAATGTCCAGGCAGCCCATCATTTGTGCCATGCCCAGAGAGTGTTCCACTGGGCCAGCTGAAGCATGGGGCTTCTGGGAGGCATGTGTCAGGGAGAACAGACCCTACGTGACAGCAGTGAGGGCAGCCTGGCTGAAGGGGGCTATAACAATCCTAATAGCTTTTAAAGGAAAAAAGTCAAAATTACAGTGCATGGCGCTGCAGGTAAGAGTGTGTGCTCTTCCCGGGCCGAGAGATGGCGCTGCAGGTAAGAGCACTTGTTTGGGGCCCAGCGCCACACAGTGGCTCAAGAATGTCCATAGCTGAACTCATTTCCCAGCACCTGCATCAGGCAGCTGGCAGTGACCTAAAACCCTAGCTTTTGGGGTTTGTCATTCTCTCTGACCTCCATGTACTTGTGAGCATATCCCCCCACCCCCTGCCACCCGTTCCCCATGAAACAGAAGCTAATTGTAGGGCATAATGGCACATGCCTTTAATTCTAACAGCTCTGTGAGCTCAAGGCCATCTGGTTTATCTAGAGAATTCCATGCCATCAACTCTTCATAGTGAGATCTTGTTTATAAAATAAATGAAATAAATCCTAAAACAAAACGACAGGAAAAGAATAGCTGATGCTTTCTTTTTAAAGATTAGTTTATTTATGTATGTGAGTACACTGTCACTGTCTTCAGACACACTGGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACTGTGTGGGTGCTGGGAATTGAACTCAGAACTTCTGGAAGAGCAGTCTGTGCTCTTAACTGCTGAGCCACCTCTCCAACCCAAATGGCTGATTCTTAGTTTTCCCCACCAAATAATGGAACCCAGTGCCTTACACATTCTAGGCAAGTGCTCTACCACTAAGCTACCCCACCTTTTTTTAAATAATTAATTTTATTTTATATATATTCATATGAAGATGTCAGATCACTGGGAACTGGAGTTACAGACAATTGTGAGCTGCTGTGTAGATGCTAGGAATTGAACCCAAGGCCTCTGGAAAAACAGCAAGTGCTCTTAACCACTGAGCTGCCTCTCCAGCCCCCATTTTTATTTTATTAATACGGGGCTTTGCTAGTTGTTCAGATTGGTCCTGAACTAGTGATCCTCCTATCCCAGCCTCCCTGGTGCAGGCAGTGTTGTCTCTTGCCTCGTGTCCCGAGTAGCTAAAACAGCTCAGGGGTGGATATGGTACCCAAAAGCCAAGCCCATACCCCTTTGGAACTAAGATAATAGTAGTTCTTGACCTTCTTAATACTGTGACCCTCAAATATAATTCCTCATGTTGTGGTAACCCCCAATCTTAAAATTCTTTTCATTGCAACTTTACTTCTTATGACTCACAATGTAAACATCTGTGCTTTCCAATGGTCCTAGATGACCCTGGGAAAGGATCATTCCACCCACCCAGAGGGGTTGAGATACCCAGGTTGAGAACTCTAAGGAATGATTCTCTGGACCCATAGAGACCAGTTTGTACAGAGTGGCCTTGAGTCTCTGAGCTTGCACGTCCTATCTGTCAAACATGACCAGACCTCACTGACTGCCGTGGGAAGCATTTTCCCAGCACTGTCCCCCAGCTCCTCCAGCCCTTGCAGAAGAATTATCATCTTCATTTCTTCCAGATGAGGACACTGTGCTCTGGAGAAGTAACACTGTTTGTGAGTAAATGACAAAATGGAGTCAGGAGAGAGATCTGTCTGTCTGACCATAGAGACTGTACTTTTGGGGGCATGTTGGGAATTAATCCCAAAATCTCTCACATGGTAAGTATGGGCTGTACCAATGCACTACATCTCCATAACACTAAAACTTGTCTGAAGTTCAGCATCCACAAGGGATTGAATTCAAGACTGGATTGGGTACCAAAATCCACAGATGTTCAAGGAGTTTATATATAGTATAGTACTCAGGCATACCCAAGCTTCACTTCTCTGCAAGAGCAGTACACACTCTGAACTACTGTACCATCTCTCCGGCCTCTAGGAATTGTTTGTTGCTCACTTGAATGTAATATGCAGGTTCAGTTTGCAGTGTGTGCAGTCAGTGTTGGTACTGTACTAACCGACTTACCACTGGAATGCATCCAGATCTCTTTCATGTGTGGGGCCCTTTGGTTGGTACCAATGTTTTGGTTTGTTGTTTGAGACAGGTTCTCTCTGTGTAATCCTGGCTGACCTGGAGCTTTTTGTATAGACCAAGCTGGCCTTGAACTCATAGTTAACCACCTGCCTCTGCCTCCCAAGTTCTAGGAGTAAAGGAATGCACCACCATGCCTGGCTGGTGTCAACCATTTTTAATCTCTTTATAGAACTCTAGTATGCTTGTGAGTGTTCACAGTGGAGACACCTGTGAGTCCACTGAGAGGAAAGACCCGGAGCCCTTCTGTACCCAGAAACTTCCTTCAAGTGCGCACGCATATGCACACACACACACACACACACACACACACACACACACACACACACCCTTGCCAAAGAGGCAGGCCCATCCCAACATAGAGCTCCTACGTATTAGCAGAAGGGAGTGCACCCAGAGCAAACGCAGTGTCCTCTTGCTTCTGACTCCTTCCTGTCACACTGTGAGGTCATCCAAGTAGCTGGCTGTGTTCTCAGTGCTCTGTGGCAGTCAATGTACTGTAATCGTCCCCTGCAATGTCAGTGGACGTCCAAGGGTCTCTTCTGGGGACCATCACATAGTATACTGCTTAAAACAGTTAGTGCATGGGCTGGAGCGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGTATGTGAAGACAGCTACAGTGTAACTCATACATAGAATAAAATAAATTTAAAAAAATCTATAAAAAAAAAAAACAGTACATTTTTAAATTTCATTACGAGGTATGTGTGAGAATGTATGTACCTGCCGCGGTCCCCGCATGAGGATCGGAAGGCAGCTTCTGGGTGTTTGTTGTCTTCCACAGTGTGTTCTGGGGCTTGGACTTTAGGCTTACATGGCAGGTACCGTCACCCATATGAAAGCACATTCCCACCCAGCATCAGTCAGTATTGTCGAGCCATCTCCAGTTACTGCCCGCTTTACACTGTTCGACCATCCATCAGCATCCGTACCTTCATCAGGGCTTGGTGTCTGCAGGAGAGCTGGCTGGCTGTGGGGAACGGCATCTCATTGTGGGTTGGTGCATTCTGCTGATGCCGACGGAACAAGATGAGTGTCCTTGAGGAGGCTGTCATCCACCACCACGTCTGGCTGGTGCCAGGCATTTTTTTTTTTTTTTTTTGGTTCTTTTTTTCAGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCGGTGCCAGGCATTTTAAAATCTCACTGTGAATGTTCACAGTGACGACACCATGGCACACTCAAAGGAAGGCCCAGATACGAATTTGTAGTTATGGCTCTCTTCTCTTCCTCCTCCTTTCTCCCCTCCTTCCTCCTCCTCCTCCTCCTCCCCATCCCACCCCGAATCCCCATTATGCTGCCTTAGGCTTGAATTGATCCTCTGTCTTAAGGTAGGGTGGAGAGCCCCTCAGAGGCTGGGCTTGCAGGCACATTACCAAGCTCAGGCCATCGGTATCTTTCTGTGAAATCACTGCCTACTCTTACGTCATAATGCACCTTTACTTTAGGCCTGTAGCATATTTGGAATTAACTTTTGTGTATGTATGAACAGAAATTTCTTCACGCCAGTGTATACCAATTTAACCTTTTCTCCCATGTGATTGGCTCTTTTGAGGTCTGTTAAGAAATCTTAGGGGATGGAGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGTGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGGAAAAAAAAAAAAAAAGAAATCTTAGGGGAGTTTCTAGGGACTGGCTCAGTTATTAACTCACTTGCTCTTGCAGAGGACCTGGGTTTGGTTCTCAGCACCCACATGGTGGCTTACAACCCAGTTCTAGGAGATCTGATTTCTTTCCTGAGCTGTGTGGGCACTGCATGCCCCTAGAATTGGAATTCTAGTACCACATAGGTTCCGGGATTTGAACCCAGGATCTATGCAAGAGCAGTAGATGATGCTCTTAACCACCAAGCTCCCTGTCCAGCCAGGAAGACTTGACATTATAAAGTAACAATTTGAGTGTAATTCTCAGGTGGCACATTCCAGCCATTTAAAGGATCCAGTTCTGGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGTGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAGAAAAAACAAAACAAAACAAAACAAAAAAACAAAGAGCACTGACTACTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTTTCTGGTGTGTTTGATGACAGTGTACTCATATATATAAAGTAAATAAAGTATCGAACTCCTTGGTTTTCAGTGGATACGGTATGTCAACACTCCCAAAGGAAAGCCCACCCAGGAGTGGCCACCACCATTTCCCCCAAGGCTGGTCTCCCTCCGTCTGTAGATTTGTTCTTTGTGGCTGCAGGCCAAGGACCATGGTGCAACCTTCAGAATTGGTTTCTTCAGTTAGCATGACCCAGTGTCCCATGAGAACTTTTTGTGAGTGGAGGATGCTCAGCTTTTTGTTTCGTCAGGGACTCACTGTATAGCCCAGGCTGGTCTGGAACTCCTGGTCGTCTTGCCTCTGCTCCCAGGTGCTAGGCTTACAGGTTTGCACAGCCTGTGCTGGGCTGAATGTGATGGATGGACAGGGCTTCCTTTTCCCCGGTCAGGAAATGGACACCGGCTCTTACCTGCCTCTCACAGGCTGCTTTCTCCTTCTCAG
Seq C2 exon
GCTGCGGCTCTGCCAATGATCTTGTGACTATTGGAGTCCATAGTTGCCCTTGTGGGCCCTTGCTGCCTTCTCCCGACATGGCGTCTGACACACCCGAGTCCCTCATGGCCCTCTGTACTGACTTCTGTCTCCGGAATCTCGATGGCACCCTGGGCTACCTGCTGGACAAGGAGACCCTGCGGCTGCATCCAGACATCTTCTTGCCTAGTGAAATCTGTGACCAGCTGGTCAATGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000025832:ENSRNOT00000035002:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]