HsaINT0187358 @ hg38
Intron Retention
Gene
ENSG00000196263 | ZNF471
Description
zinc finger protein 471 [Source:HGNC Symbol;Acc:HGNC:23226]
Coordinates
chr19:56518482-56530221:+
Coord C1 exon
chr19:56518482-56518577
Coord A exon
chr19:56518578-56524323
Coord C2 exon
chr19:56524324-56530221
Length
5746 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
TTTTTTTTAATATCTTTCAGATT
3' ss Score
11.75
Exon sequences
Seq C1 exon
GTCTTTGCATTTCTAAGCCATATGTGATCTCCTTATTGGAGCAAGGGAGAGAGCCTTGGGAGATGACGAGTGAGATGACAAGAAGCCCATTCTCAG
Seq A exon
GTGAGTGTGGAAGAACCAGAGAGGGGAATCTTTTTGACATAATGGCTCAGCCATTTTTAGAGGTGATACCTTCTCACTTATGCATCTCAGAAACTCTTCATAAGCCTTACAGGCCTGGAGAGAAAACTGAAACTTTATGCTTCACATGGGCCCCTCAAATATCTTCTCTTCCACTTGACTGTCTTCTCTCTAAGAACTAATATTCTGTAGAGATTAGAGAATCTTAAATCTCTAAGATTTTTGTTTTGCAAAAATCATTATCCAGCTCCTTACCATCCCGTCTTTCGCTTTGCCATACAGACTTATATAAACTTCTATGTTTCTTAAATCTTTTCTTAACTCTTGAATTAGGTACTGCTTACAAATTATAATGTACCCTGCTGCTCTTTCATTCCTTTCCTGTAGCAGATAGGAAAAATCTAAACCCTGTTAGCCTCTTCCTGATCAGCTCCTTCCTACTTCTATAACCTCATTCTTTATTACTTTTTAGCTTTTTCATTATACTTTAGTCCAGAGTTTGCTAAATTATGTGAGATACCCAGGGTATGTTTCAAGTGAGTTACAGGTATACCAAGCTACTGAGTCTCTCAAGAGCCTTGGGAGACTAGATGGCTCCAGAGGTAATTCCAAATCTGATTGCCTCTGAGTCACAGGCAGTATCATTCTTTTGCCTGCTCCACCTGTGTTTTACAAATGTCATATTAGGGTCAACTTTTCTGAACTCACCAAGCTTTTTACTGACTCAGGCATATGCACTTCCTGTTTCCTCTACCCAGAGTGTTCCTCTCCTGGGGTCTGTCTATCCTGAATATCAAATCAGAGCTAAAAAATCATCTCATCAGAGGCCTTCCCTAACCACCTTATGTGATGAACATTTCCCCATCCCAACCCAATAACTGTCCACCAAGCCACTGTTTATTTTCTTTCTAACACTCAGGAAAGCCTACAATTAACTTGCTTATGTTTAATGCTTATATTCTGCCTCTCCCACTGAAATTAAAGTTCCAAAAGAAAAGGGCATATCAATATATGCCCTTACAATTATGGCTTAAAGCATTCTCCTTTCCCTTCTGTAACAGTGTTTGATCTTTTGGAATAATTTGGATCCTAAATTTCCCGTGTCCTCCAAATACAATAGTCCCCCTATTCAAGGTTTTGCCTTCTGCAGTTTGTTACCCACAGTCCACCACTGTCCAAAAATATTAAATGGAAAATTCCAGAAGTAAACAATTTATATGTTTTAAATTGTGCACCATTCTGAGTTGTATGACGAAGTCTTGCACCTTTCTGTTCTGTCCTGCCCAGATCATGAATCATCCCTTTGTCTAGCACATCCATGCTGTATGCCCTACCTGCCTTTTAGTCTCTTAGTCTCGTCTAGCTTTTCAGATCTGTTGTGTGTAGTGAATATAGGGTTCAGTATCATTCCGGGTTTCTGGCGTCCACTGGGTCTTGAAATGTGTCCACTGTGGATAAGGAGGGATGACTATACCCACACATCAGAAGGGAAATAGACCCTGCTTGGATGTACTTTATACTTTGGTTTTGTATGAAGATGCCATCTGCCTCAAATAGAGAAACAGAAAAGAACTTTCCTGATAATTGGCCCTGTGAAGAACAAGTGGAAGAAGGGAAAAGGGGAAAAGGAAGAAGCTATAAGTCTGGTGGGATGCTGAGTCAATGTGTAGATATAAGTATTATTGTATGCATAAGATATCTTAGTGTCTGTTAAAAAAGGCCAGGAAATGAGGAACAACCATGGCTCTCTGTAGGAAATTGGAGTTGAAGACAATCTTCATGTGACAAAAAAGTAAAATGTGAGAAAACAGTAGATGATGGACTCAGCATTCTGTGTCTTTTTCTAGTATTGTTCTCTTCAGTCTGTCTACGTAGGAAAAATTATAGGTGATTAGTTCATTAACCCCACATTGCCTCAATTCTTGAAGCATGGGTGCCCTGGTCTGAATGTTTGTGTGCCCCTGAAATTCATGTTGAAATCATCTTCTCTAGAGTGCTGGTGGTAGGTGGGGACCTTGGGAGGTGATTAGGTCATGAGGGCTCATGAGTGGGATTATTACCTTTATAAAAGGCCCAAAGGAGCTTCCTTGCCCCTTCCACTGTGTGAGGAAACAGGAAGAAGGCACCATCTGTGAGAAAGCCAGCCCATGCCATGGGCCTTGATCTTGGATTTCCCAGTCTGCAGATCTGTGAGAAATAAATTAGCCATGGCCGGCTAATTTTTTATAAGTGTATTAGTCTGTTTAGTTATAAGTGTTGTTTGTAAGTGTATTAGTCTGTTCTCAAGCTGCTAATAAAGACATACCTGAGACTGGGTAGTTTATAAAGGAAAGAGGTTTAATTGACTTTTAGTGCCACATGGCTGGGGAGCCCTGACAGTCATGGCAGAAAGCAAAGGAGGAGCAAAGTCACTTCTTACATGGTGGCAGTCAGGAGAGAGCTTGTGCAGGGGGACTCCCATTTACAAAACCATCAGATCTCGTGAGACTTATTCACTGCCAGTGAACAGTATGGGGGAAACTGCCCCCATGATTGAATTATCTCCACCTGGCCCCACCCTTGACATGTGGGTATTACTACAATTCAAGATGAGATTTGTGTGGGGACACAGCCAAACCACATCAATAAGCTACCCACTATGTGGTACAGTCATGGGCCACATAAACAATGTATCTATCCATTATGGACTGCATATAAGACAGTCACACAAGATTATGATGGAACTGCCCTATACAGGTATAACTTTAAAAAAATCTCTTCTGGCTAGGCGTGGTGGCTCATGCCCATAATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACCCCGTCTCTGTTAAAAATACAAAAAAATTAGCTGGGCATGGTGGCATGTGCCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCAGAACTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCCGGGCAACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAACTCTTCTATTGCTGGGCATGGTAGCTCACACCTATAATCGCAGCACTTTGAGAGGCTGAGGTGGGAGGATTGGTTCAGCAGGAGTTCCAGACCAGCCTGGGCAACAGCAAGACCTCATCCCTACTAAAAATAAAAAATTAGCTGGGCATGGTGGCATGCACTTGGTACTCCCAGCTACTCAGGAAGCTAAGGCAGAAGGATCACTTGAGCCCAGGAGTTTGAGGATGCAGTGAGCCATGATCATGCCATTGTACTCCAGCCTGATGACAGAGGGGACCCTGTCTCAAAAAATATATATAAAATGTCCTCATAGCATATTTTACTGTACCTTCTTTATGTTTGTATATGTTTAGATACAAAAATACCATTGTGCTTCAGTTGCCTATAGTATTCAGTGGTAACATGTTGTGCAGGCTTGTAGACCAGGAGCAGTAGGCCATATAGCCTAAGTGTGCAGCAGGCTACACCATCCATCAAGGTTTGTATAAGTACGCTCTGTAATTGCCCATCCGTAATGATGCATTTCTCAGAGCATTTCTCCATCATTAAGTGACACAAGACTATTTTGTTATAGCAACCCAAGTTATTCAAGACACTGGATATTCCTGATACCATGAAGACCTGGACTACAAAGCATGTTAATACCTCAAAACCTTTCTTGACTGCTCTAGTGGATTTGATCTCTCCCATCTCTGAACTTTTATAACAATTTAATCTTTATCTCACACTTGATTATGTTTTGTATTATCTTCTCAAAACTTTTTTTGTTGGTCTTGTCTTCCTAAATTACTTTCTAAACTTTTCAAGAACAATTCCTTCATTACTTTGATATCACAAATGCTTAGTGCATAATGTATAATTGCTTAGGAAATATTGGATTAGTCGATGATTTGCTATGGATGACATAGAAAAGGAAAGCCCTTCCTTTGCCTTTTCTTGAAACCACCTTTTCCCTCAGGTTTTCTCTCAGTATCATCTCTTCAATACAAATTTCTTTATATTTTACTGATAACTTTGTATATATGCCCAGATTTCTTCTATCTATGGTAAGTGATGTAGCAATATATTTTTTCTTTTTTTCTTTTTTTTTTTTTGAGATGGAGTTTCATTCTTGTCACCCAGGCTGGAGTGCAATGGCACAGTCTTGGCTCACTGCAACCTATGCCTCCTGGGTTCAAGCAATTTTCCTGCTTTAGCCTCCCAGGTAGCTGGGATTACAGGCAGGTGACACCATGCCCCGCTAATTTTGTGTTTTTAGTAGAGACAGGGTTACACCACATTGGCCAGGCTGGTCTCTAACTTCTGACCTCAGGTGACATGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCATTGCACCTGGCCGATGTTGCAATAATTTTTAAAGCACATTTATTCCTTCTGTAAACTTATATTCTAGGTCAGGAGTTAAGAAAGTTACTCGTGGTAGTAAATAAGAATGTGATTAATAGTAGTTATATCAACCTACATATCATTATAAAATTCATTTCTTCAAAAGGGGAAATGGTAAAACCCTGTTAAGCAGTGGCTTAAGGTGCTGGGTGCAGTGGCTCACACCTGTAATCCTAGCTACTCAAGAGAAGGTGGGAAGATTGCTTAAGCCCAGGAGTTAGTGAGCCATGATCATGCCACTGCACTCCAGCCCGGACAACTGAGTGAAACCCTCTTTTTTTTTTTTTTTTATAAAAAGGTGGTCTAAGAGGTGATAATTTTACCAGGCTGTTGAAAGTAAGATGAAAGGGAAAATCTCTTAATATGCAGATTAAAGTTCAGGGAACTCTGAGAATTGGAGAGTTTGCTGTATTGAAACATGTAGATGATTTCATAGGAACACCATTTTCACATTATGAAAAGATAACCATAGGATTTCACCTAAATCCTAAGATAATCACAAGCCATAGGGTATATGGTTACTGGAGATCTCCAGAGACTTTTCAGCAGCAGTAGTGATACGATATTGGTATTTAAACAAAGTTAACATAACTGTATATGAAAACCAATTACAAGTGGAAGAGAGTAGATGAAGAGAGCTTAATTTATAGTCTGTTAGGTCAATACAGGCATGAAATATTACCATTGCAGACTACTTCTCTAGGATTTCATCCTACATTGAGGTTTTTGTTTTTGTTTTTTGTTTTTGTTTTTGTTTTGAGACAGGGTCTTGCTCTGTTGCCTAAGCTGGAGTGCAGTAGGGCAATCATGGCTCACTGCAGTCTCAACCTCCTGGGCTCAAGTGATCCTCTGACCTCAGCCTCCTGAGTAACTGGGAATATAGGCATGTACCACCATGCTTGACTAATTTTTGTGTTTTTTGCAGAGATGGTGTTTTGCCATGTTGCCCAGGCTGGTCTTGAACTCCTGGGCTCAAGCAATCCACCTCAGCCTCCTAAAGTGCTGGGATTATAGGCCTAAACCACTACACCTAGCCCATTTCGCTTTCTTAGTCACCTCTCCCATGTTCCTTCATGAGCTGTCTTTCTTGGGGTCTCCCTGAATGTTTTCCAGTTGACATGCCTGTACATAACAGGTTTTGTGAGATTTATTAAATATTTTTAAATTACCTTTTTCACAATGTCTCCTTTGTTGTAGCCCATGATAAAGGGAACATTCACTTTTTTTTAATATCTTTCAG
Seq C2 exon
ATTGGGAATCTATATATGTGACACAGGAATTACCTCTGAAGCAGTTCATGTATGATGATGCATGCATGGAGGGAATTACTAGCTATGGACTTGAGTGTTCCACTTTTGAAGAAAATTGGAAATGGGAAGACCTTTTTGAGAAGCAGATGGGAAGTCATGAGATGTTTAGCAAGAAAGAAATAATCACTCATAAAGAAACCATCACTAAGGAAACAGAATTCAAATATACTAAATTTGGGAAATGTATCCATCTGGAAAACATAGAAGAGAGTATTTATAATCACACATCAGATAAAAAAAGCTTCTCCAAAAATTCTATGGTAATAAAACACAAGAAAGTCTATGTAGGAAAGAAGCTTTTTAAATGTAATGAATGTGACAAAACCTTCACCCATAGCTCATCCCTTACTGTTCATTTTAGAATTCATACTGGTGAAAAACCATATGCATGTGAGGAATGTGGAAAAGCCTTCAAGCAAAGGCAACACCTTGCTCAACATCACAGAACACATACTGGAGAGAAACTCTTTGAATGTAAAGAATGTAGGAAAGCCTTCAAACAAAGTGAACACCTTATTCAGCATCAAAGAATTCATACTGGAGAAAAACCATATAAATGTAAGGAATGCAGAAAAGCCTTCAGACAGCCTGCACACCTTGCTCAGCATCAGAGAATTCATACTGGAGAGAAACCCTATGAATGTAAAGAATGTGGCAAAGCCTTCAGTGATGGCTCGTCTTTTGCTCGACATCAGAGATGTCACACTGGCAAAAGACCCTATGAATGTATTGAGTGTGGGAAGGCTTTTAGGTATAACACATCTTTTATTCGTCACTGGAGGAGTTATCATACTGGAGAGAAGCCTTTTAATTGCATTGATTGTGGGAAAGCCTTCAGTGTTCACATAGGACTTATTCTGCATAGGAGAATTCATACAGGAGAGAAACCTTACAAATGTGGTGTGTGTGGAAAAACCTTCAGCTCGGGTTCATCCCGTACTGTACATCAGAGAATTCATACAGGAGAGAAACCTTATGAATGTGATATATGTGGGAAAGATTTTAGCCATCATGCATCACTCACTCAGCATCAAAGAGTACATTCTGGAGAGAAACCGTATGAATGCAAGGAATGTGGGAAAGCCTTTAGGCAGAATGTACACCTTGTTAGTCATTTGAGAATTCATACTGGTGAAAAACCCTATGAATGTAAAGAATGTGGAAAAGCTTTTAGAATCAGTTCACAGCTGGCTACTCATCAGAGAATTCATACTGGAGAGAAGCCTTATGAATGTATTGAATGTGGAAATGCTTTCAAACAGAGATCACACCTTGCCCAACATCAGAAAACTCATACAGGAGAGAAACCTTATGAGTGTAATGAATGCGGGAAAGCCTTCAGCCAAACTTCCAATCTTACTCAACATCAAAGAATTCATACTGGAGAGAAACCCTATAAATGTACTGAATGTGGAAAGGCTTTTAGTGATAGCTCATCCTGTGCTCAGCATCAAAGACTCCACACTGGCCAAAGGCCCTATCAGTGTTTTGAATGTGGGAAGGCGTTCAGAAGAAAGTTATCCTTAATTTGTCATCAAAGAAGTCATACTGGAGAAGAACCTTAAGAATGTAGTGCATGTGGCCAAGCCTTTAGTTATCACCAATCCCCTACTGTTAATCAGAGATGTCCCACTGGATAAAAAACATATAAATGTAAGAAATGTAGAAAAACCTTCAGCCAGGAGGCTGGCAAGATGGCCGAATAGGAACAGCTCTGATCTGCAGTTCCCAGTGAGATCAACGCAGAAGGTGGGTGCTTTCTGTATTTCCAGCTGAGGTACCTGGCTCATCTCATTGGGACTGGTTAGACAGTGGGTGCAGCCCACGGAGGGTGAGCTGAAGCAGGGTGGGGCGTAACCTCACCTGGGAAGTGCAAGGAGTCGGGGATCTCCCTCCCCTAGCCAAGGGAAGCCATGAGGGACTGTGCCATGAGGAATGGTGCACTCCGGCACAGATACTACGCTTTTCCCATGGTCTTCGCAACCCACAGACCAGGAGATCCCCCTTGGGTGCCTATGCCACCAAGGCCCTGGGTTTCAAGCACAAAACTGGGCGGCCATTCGGGCAGACACCGAGCTAGCTGTAGGAGTTTTTTTGATAGCCCAGTGGCACCTGGAATGCCAGTGAAACAGAACCGCTTACTCCCTTGTTAAGGGGGCTGAAGCCGGGGAGCCAAGTGGTTCCCATGCCCACTGAGCCCAGCAAGCTAAGATCCACTGGCTTGGAATTCTCCCTGCCAGCACAGCAGTCTGAAGTCAACCTGGGATGATCAAGCTTGGTGGGGGGAGGGGCGCCAACCATTACCAAAGCTTGAATAGGTGGTTTTCCCCTCACAGCGTAAACAAAGCCATGGGGAAGTTCCAGCTGAGCAGAGCCCTCCACAGCTCAGCAAAGCCTCTGTAGCCAGACTGCCTCTCTAGATTCCTCCTCTCTGGGCAGCGCATCTTTGAAAAAAGTGCAGATAAAACCCTCATCTCCCTGGGACAAAGCACGTGGGGGAAAGGGGTGGCTGTGGGCACAGCTTCAGCAGACTTAAACATTCCTGCCTGCCAGCTCTGAAGAGAGCAGCAGTTCTTCCAGCACAGCGCTTGAGCTCTGCTAAGGGACAGACTGCCTCCTCAAGTGGGTCCCTGACCCCCATGCCTCCTGACGGGGAGACACCTCCCAGCAGGGGTCCACAGACACCTCATACAGGAGAGCTCTGGCTGGCATCTGGTGGGTGCCCCTCTGGGACAAAGCTTCCAGAGGAAGGAACAGGCAGCAATCTTTGCTGTTCTGCAGCCTCCACCGGTGATACCCAGGCAGATATGGTCTGGAGTGGACCTCCAGCAAACTCCAGCAGACCTGCAGCCGAGGGGCCTCACTGTTAGAAGGAAAACTAACAGGAATATAATCAACATCAACAAAGGACATCCACACAGAAACCCCATCTGAAGGTTACCAGCATCAAAGACCAAAGGTAGATAAATTCACGAAGATGAGGAGAAACCAGTGCAAAAAGCCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGATCACAACTCCTTGCCGGCAAGGGAACAAAACTGGATAGAGAATGAGTTTGACAAATTGACAGAAGTAGGCTTCAGAAGGTGGGAAATAACAAACTCCTCTGAGCTAAAGGAGCATGTTCTAACCCAATGCAAGGAAGCTAAGAACCTTGAAAAAAGGTTAGAGGAATTGCTAACTAGAATAACCAGTTTAGAGAAGAACATAAATGACCTGATGGAGCTGAAAAACACAGCATGAGAACTTCGTGAAGCATACAGAAGAAAAACCTTCAGCCAGATTGAATGCTTTACAGGGAAGAATTCATACTGCAGAGCGGTCTTAACAATGTAAAGAATGTGCAAATGTCCTCAGACAAGATGCACACCTTGCTCATTAGTGAGTTCATTTCAGGCAGCCAGCTCTTCCTCACCCACTACATCACCAAGTCCTGTGGATATATCTGCTAAATATTTTTGGAATTTATCCACTTCTTTTGGTTCCCCAGTCCAAAACACAGTCATTTCACCTGGACTATTTCAATCATTACACAGGTGTCCAACCTTTTGTCTTCCCTGGGCCACATTGGAAGAAGAAAAATTGTCTTGTGCCACACATACAATACACTAACATTAACAATAGCTGATGAGCTAAGAAAAAAAAAAAGTCTGTGCATAGTTTTAGTGATACACCACCTCCGATAAGCAAAAAAGTCCTCACATTCAATGGGTTGCATACCCATGAATTCTAAAACTTCATCCTCTTTTGTCCCTTTCGAGTTAACATTACAGCCACAGTGACCTTTCAAAAATGCAAATTAAGTTACTCTTAAAACTCTAGTTAAAATACTTGATGTACATAAAGTGCTTAGCAAAATGACCAACTCATACTAAGTGCTTAGTAAATGTTAGATAAGTATTCTCCAGAATTGATGTAAATTATTTTTAAACAGTGCATTCTTGAAAGCAGTATGGCAGTCATAAAAATTTTGGAACCAAAACAGTATCTTTTTTTAAGCTAAAAAAAAAGTTTTAAATGGTGTCTTTCTATGTTGCCCAGGGTGGTCTCAAACTCCTGTGCTCAAGTGACCCTCCCACCTCATTCTCAAGTGGCTGCAATTACAGGCAACCAGCCTGACTTAAAACAGTATCTTAAGGTAGATGGTGATTAGCACATGTAGTATGCTTAACATTTAATATTATAATAAGACATCACAGCGGCTGTCTCATGATTAAGGCTGTGTTCCCTTGTTGGTGAGGAAATTAATTATGACTTGATAAATAGAACATGTTTTAAGAAGTGGCTATATAGCTCTGGATAAAACGAACAAAAGAATTAGAATTCCTGCGGGGAATATATACAAGACTTTATTTAGTCAAGTAAAAAAAAATCACTAATGTTTAACTGAAGAAAGAGAAATTGAATAATATAGTTCTATTTCAACATGTGGGTTCACAGATTTATTCTAACCTTCCAAGTAAAGTTGTTCCACTAGTAAAGTTGTTCTGGAGTATATTTTTTTTAAAAAAAACACTTAAAATGTTCCACTTCTTTCATGAGGCTAAGTCAACTCTGATATCAAACCAAGGGGAAAGAAATGAAATTATAGGTGAGTTTACTTAGTTATATACAAAAGGAAATTATTAGCCTCTGCTGATGGAGAACAGAGGCTGTGAATAAATGGAGATCCATAACATGATCCTACATGAATGTTTCAATATTGTAATCCTGTAAGTTACTTTTACATTGACAGTTCTGAAATTCATGTTGAGTGTTAATTAGGCAGGAATCAGAAGGGAGGTTTTGTAGAAGGTCGTATCCATGGGTTTTTTATATTTGAAAAGTGTTTTCGATGTATCATTGGGGGAGATTAAATGTCTTTGACAGTTGTCCAACTAGAAATAAAGTCAGCATCCCATTTGACTCCTTACACAGAAGTTCATTCTATACTCATTACAGATGTAAGAGGTTAAGATGGTAGAGGAGAATGTAGAGTATTTCTGTGCCTTTAGGTTCAGGAGGTCTTTGATAAGCAGGACAAGGTCCAGAAGCCATGAAGAGAGAATGACAGGACTGTGTAGAAGATTTAAACCTTTTTCATGGCGTAAGATACTGTATGCAAAGTTAAAAGGCATATGACAGGCTGAGAGATATCTTAAACATACATTAGAAAGGATATAGCCCTTGAAAAAGGGCTGTTGGAAAGCAGCAAGGATAAGGTGCACAGTCTTGCAGAGCATGTCAACAAAATTTATTGGATGAAGAAATTAAAATGGTTAAATAGAAGAAGTTCTCAACCTCACTAATGATCAGATAAGTGCAGATTGTAAAAGTCCTCATCCCCACCAACACAAACCAGCAGAAATTTTATGTGAATGTGAAGTTTGGATAATATCCAGTATTGTCGCAGGTGTGAGAAACCGTATTTTCAAATATTGAGAGGGTAAATTAGAGGAAAGCCATTTTAGAGGGCAATGTGGTGTTACCTGTCAGCATTTTGAATATAATTACCCTTTGCCACAATTCTACACCTAGTCAGTTATGTTCTCAAAAAGCACAAGTGCAGAAATATAGATGCATAAGCAAATGTGTTGCAGAATTGTGAAAAATTTGGAAAAAATGTTTAGTGCTATTAAAGTTATGGGTTACTTAAGTTACAGAAAATCAGTTTAGTAGATCACTGTGTAGTTACGGAAAATGAGATGGATCTCTACTCAAAGATGTCTTGCAGTTTATGAACTGAGATGTAACTTCATGACTAACATGATGACATCGTTATTAACTACATAAACTTTATAAAGCTTAAAAAATGCATTCAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000196263:ENST00000308031:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.009 A=NA C2=0.048
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Rat
(rn6)
No conservation detected
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains