HsaINT1017161 @ hg38
Intron Retention
Gene
ENSG00000151704 | KCNJ1
Description
potassium voltage-gated channel subfamily J member 1 [Source:HGNC Symbol;Acc:HGNC:6255]
Coordinates
chr11:128838155-128850890:-
Coord C1 exon
chr11:128850721-128850890
Coord A exon
chr11:128840265-128850720
Coord C2 exon
chr11:128838155-128840264
Length
10456 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGT
5' ss Score
10.03
3' ss Seq
TTTCTTTGATGTGTTTTCAGATC
3' ss Score
9.97
Exon sequences
Seq C1 exon
GTTTCTTCTCTACTGTGCCTTCATCCCCATCCTGGGCCCTGACAAAGACAGTGTGACAAGTTCTGAGCCCCACAGGTGGAATCCCAAACCAAGCAGCTCTTGCTGGTCACCCCAAGATCTACTTATACATGAAGTTTTGAAAATCATCTCCTGAACCTCTTCTGACAGAG
Seq A exon
GTGAGTGGCTTGATTTTCAATAAGCAACTATTGGACACCCCAGGCTACAAGAAAGCTAGGTAAGCATTTGGTTATGCAGAGCCTCTTAAGCAAAGGCTGTGGGACCTAGTCATTTGCCCTTGCAGGTTCTGCAAGTACTGAGTCCCACCACCAGCATCAGAGAGTGGTGTTAGGCTGGCATTGCTCTCTCCACAGCCCCTTTCAAAAATCAAGCACTTTGAGTCATTTACACCTTCCTATATCTGTTTATTTCCTTGACAGATACCTGTTGAGCCTCTGTTCTCTGCCTGGTGCTGGGGTAGGCAGGGACTGGGGACATGGCAGTGGAGGAGACAGCACAAAAGTAAATGTATCAGTTAAAATTACTGTTCATACCACAAATGAAAGGAAAGCATACAGTCAAATTTTGCAAGGAGAGGAAACTTGATTTAAATGGGGAGGGGGATCTTCTTCCTTCTTTGAGAAACTGACATTTAAATGTCTTTCTGAGAAATGACATTTAACTTGAGGTCAAGAAGTTGGCAAGGGGGTGGGTGTGGCGTGGGGGAGAGTAGAGCTCCAAGGGTTTCCAGCCGAGGAAATAGCAGGTGATGTAGGCCCAGAGAGGTTAAACGACCTGCTCCAGCCTCTATGGTTGGAGGCGGGGGGGCCCTCCGATGTGTCCTTTTTTGCCTTTGTATTCCCAGTCTGCTTCCTGGACATGACCTCAGTACTGACTCCAAGGTCAAGAGCTTTGCCCTCTGCTAGAGCAGTGAGTGTATGGGGCTGGCTCATCGTCACTGGCAGGTTTGCCTTATCCACCAGGTGGTGGGTTGGCGGGCGGGCAGGAGGGGTTGGAGGTGTTGCCTCCTCTTCCCACAGGAGCCATTGTCATCACACCAAACTTCTGCCTATAGAAGAAGTAACAACACCCTGTAGAGGCCTACAGATGTCCCTAAGTGTAAAATGTCACTCCCACAACCTCAGGCCGTTTGCTTATGCCAGGACAATCCACAGAAGCTTCCAAAAAAAAGTATGATGCTGGACAGTGTATCTTCAGCTGCTCTCATGGCTGCTTCTTAATTCTGTTGATATCATAACCATTTCTAAACTCTGCCTGGCTCTGCCAGGCCCCTCTCATGACATCAGGGCCTATGGTCTTCTCCTCCAACACACACCCTCAGATCCAACCCAGGGTACCTGCTGCCCTCTCCATCGAGCTCTCTCCTTCCTCCTCTTGTAGTGCTTTTGTAGATGCTGCAAAACCCCAGAAAACTGTCCCCTCCTGATCCTTTTATGCTCACTATCTAAAAAGGTTTGGACCCTTGCTAGCTCTCACCCTCTCATGTGATCACTCACACAAAGCAAGGAAATGTATAGAAAACCATTCCTGGCGCAGAGTAAGTTGATGCTGAATAAATATTTACTTTCCCTCTACATTGTTTACCAACTGTGTTACATATGCTTTAGGGCTTAAAAGCAAAGACTTGTCAGTTGGGAAGATCTAGATTCTTCTAATCTTTGCTCTTTGGGCTTTCTGCTTTGTGACCTTGGATAAGTTGCTTAACTTCTCTGAGCCTCAGTTCCCAGCCTCCTAGAGTTACCATGAGTTTAAATCCAACAACACCTTTAAGAGATTTTGTATCCGTGCCTCGGATGACACTACAGGCCTTTGGGGGCCCAGAATGCCACTACTCCAGAGGGGCACCGCTGGCATCGTGCTCCAGGGGGCGCTGTTCACTGAGACTGCCGCAGCGTGTGTCTCCAGCAACGGGCAGCAGACTACAGAAGCCCATTCTGGCCGCCTTAATGGCCATTCCACACTCTCTGGAGACTGTTATCAGCCCCAGCCTTTTTCTTCATTCATCTGTGCCTTGCACTTCCATTTTTACCTTGGTTTACCTTCTCAACCCTGGCTCAATCCACTTATATCCAATAAAGCAACACTTTCCCTTAAAGTGCAGTACTCTGAATTTTAGAAGAGAAAAATTCTTAGAAAATCTCTAGTATAGCCAAGTAGCTCCCATTGTGTGGCAGTGAGTTTCTCCTGTCCCCTAGGGTGCTCCAGCTCCTTGTCACTGTTCCTCACAGCCCCTGAGGATGTGCTGCTCTCTCTTTAAAACTCTGAACAGGGCAGGGATCAAGTGCTTCTTTTGGTCTTTCTTCATACAGCTGAGACATGCTAGCATTTCTGAAATATCTTAAGAAACTATTATGAAGAACAACAGGAAACAATATTGGAAATACAGAGGCCAGGCATGGTGGCTCACACCCGTAATCTCAGCACTTTGGGAGGCTGAGGGAGGAGGATTGCTTGAGGCCAGGAGTTCAAGACCAGCCTGGGAAACATAGTAAGACTCCATCTCTGCAAAAACAATAATAACAACAAAATCAGCTGGGCATGGTGGTGCACACCCGTGGTCTCAGGTACTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTTGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACACCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGACGGAGTTTCACCATGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGGGCCCAGCTGGTCTCAGGTACTTTGAGGCTGAGGCAGGAGGATCTCTTGAGCCCAGGAGGTCGAGGATGCAGTGAGCCGTGATTGCACCACTGCACTCCAATCTGGATGACAGAGTGAGACCCTGTCTCAAAAATAAATAAACAAATAAGAAACAAAAGAAAAGAAATGAAAAAGAAAATACATACAGGATAAGCATTCACCTTCCAAAGCATTGATTTCTGACTACAGCAAATGTGGGCTGCCACCAAAGACTGGTAAGACCTCACAAACACCCTGCCCGGGTTCAGGCTTCACTAGCTCCCAGTGGTGGGGACATCACAGCTTCCAGCGCTTCCCACTGGGACCCAATCAAGGTGCCAAGAAGAGGTATAGGTTTTTGTGGTCAGAGTATAGTTATCTTAGGATAACCAATGGCTTTGGGAAACAAGTTAGCTAGATAGAATTCAAAAGCCGAACTTGAAATTTTTAACTCATTTTAATGGCTTTTTCTATTTAACTTGGCTATATCCTTGATTCTTCACTTCTTCATACAGAAACAAACATATGTACCAATTGCACATAGGCATGTAAGACTTGTGGAAGCCACGGAATGGAATTGGTTCTCACCAGTGGGCTTGTAAAGTGGTTTTGTTGTGTTATAGTTACACTTATTTCCTGTGCTCTTAGGGTCTTCAGTGGTCAGTGCCCTCCAGTCAGAAAGCACCAGTAGTACCCTGTATTTGAGCAAGTTGGACTTTTTGCAGCTATGGAGAACTGCACCATAAACAATCATGGGGCGTCTCACTGAGAGGGTTTTGGAAAGGACTTGCATAGGATCTGGGCATGTTTCAGGTGATGCGGCGGGGGAGGCTTAAGGAAGCAATGCTTTGCTCTGGATTAGGGGCTGTTAGGGAGTAGTGATGATTCTATGATCAAATATGTTGATAATTCTTATTATCTAGGTGAGAAGACTGACATGAGACTAAAGCTGTTCTGGGGAAAGAAACAGCAGACACTCATCAGGATGGGGGGATATTCGGCCATTTTGTGGCTTGGACAATGTTTGTGTTTTGTTGGTGTTCAGACATGATTACAGAGTGGCCTTGTTTTATCCCAATCCATCATGATCTGAGTGGCCTGGTCTGAGGCTGATGATTTGTGAGATTGCTTGTGTTTAACAGGAGCAAGACCCAGCCTCATGTGCCAGGAGAACCAAGACCTCGCCGGTAGTACGAGGTCACCTTCCAGTGGCCTGCTTTTCCACAGATCCAATCCTAGTTAATCCTAATCCTAGGGTGAGAGAAGAACAGCATCAAGCCTCGGTACCGTCGCTCTGTTCAGCCTTGCCAAGGATAATTCTCTCCCTCTATCCTGTTCCCACCTCTCCAAGACAAGTCTTTTGCCCTGATTATAGAGAAAACCTTTATAAAACATGTTTGTATTTTCCAGATCTTCTGTTGCGCACTGGGAGGATGGGCTCTGAAGCTAGCATAGTTGATAGACCAGATATGTTGTCAGAACCTTCATCACTCTCACGGAAGCCTTTTCCTCCATTGGCTGTAGTCTCCAATATGGCCCATTTCGCTCCAGGAGGTAGACCCCGATTGGCCTGGACCAGTGACCCCTGATTAAACTGCCATGCTAGTTTGAAATTTGGGAACCAGTTATAATAATTGTAGCTATTTATTGCATAATTACTATTTTCTAGGAACTTTACCTATGCTATTGCATTTAAATCATACAACAATGTTTGAGAGTATATTATAGCCATTTCACAGGTGAGGAAACTCACCTGTATCAGCAAAGGTCAGTGGTTTGCTTAGCTCACCTGACTCTTGGGTGGCAGAGATAGGGTTCAAATCAATGTCTGTGCTAACCCGAGCTAGAAGCCCGTCGACTCTGCCATGCTGCCCCTAGCTGTTACCTCTTCTGGGAACATTACTGGCCAGGATCTCCTATCTTCTCCTGATCCCCTGTGCACAAAAGGACAAGTTATTCAGAAAGTGATACTCTGGATGGCTGGCCCAGAGACGCCTACAGAACACAGTGTGCCTCCTGAGAGTACCAACACCATCAGACCTTGTGATGCTTCAGCCCTTTTTCCCCAAGCTCTCTTCTCTGGAAGGAGGGAGGCACCTAGGAAGGCCCTTGCTGTACACACACCCTGGATACAGACACACTCTGGTTCATAGCAGTGGGGACCCAGGAGTATGCTCACCCTACAAAAAAGTAGGGTATTCCTGAAGTGCATTCCCAAGTCTAGCCTGGAAGAGTCCTGAAGCTCAGATGCCCTCTTCTATGCCCATGAGGCCAGGAAAGATGGTTTCTACCAGCCTTGCCAAGTTCTATCTAAAAAGAGCCCATGCTGTTCCCATGTGAGCTGCCTGATAGTGGTAAAGACATCAGAGATAACTTCTCTGGCATTACCGAACAGAAGGGAAATGCCACTCTCTGTCTACTACAGGTTCTGGATGTGATAAGTGTAGTCTGTGGAGCTAGATGGTTTACTGCTTCTCGGGGCTCTGAACCTTTGCAGATCCAGCAGGGTGGTGATCCTCCAATAGCTTGAGATGATTTTCATAGAAAACAGGAAGTCCTCCACAGCAGCAGTTAGATGCACTTGTTTTCCTTCCTTAGCAAAGCTGAGTAAGAATACAAGCCCAACACCCACCCAACCTTCTGGGTCTCCTCTTTGGGACTGCCTTAACATCGTGTCCTCAATCATTTCAAGGCAGCAAACCTGCCACATTACAATTCTTGAATTACTTATTCGTGAACAACTTGAGAGCAGGGACTGTTACCTTGCATTGTTTCCTAGCATAGCACCTGGTATATAGTAGATGCTCAATAAATAATGTGTTTGTTTAATTATATTGATTAAGAAGGAAGGGGCTCTGCCCCATAATCCCATTCAATCATTGCAATGGAAAATCCTCAAGAAATGTTTCCAGATTCAATCGACTGTTGACAAAGCAGTAATTTTTTCATAGAAACGAATTTCTTCTCCATCACGGTTAGAAAGGGACTAGAGAAAATCATCTGACTTCTCCTCTCAGGCCACATAGCTCATATTTCCTACCTCTAATCTGAAATCCTGACTCTCAGAAATGTCCTAAAGTTACCTAAGGATGTGCATGAGCTATGAGAGGTTTGGCTGAAAGGCAGACTGCAATAAGTGTTTTTTTTTTTTCCATTTCTATAGAGGAACAATAGACTTTTAATTCTAAATCAGAAGCGGTAACAGCCATGCCTATTTTCCCTTTCCCCTCTTTGACATAGTGGCTGTTTGACTGCTGAGCAGGCTGGGGTGGTAAGTGCTGTAAGAAATCCCAAATTCTGAATGAATTGTTCTCAAGTGGATGTCTGTGGAAGAAGAGCTTCTGCACCTGGGTTCATCAGATTCAGTAAGGACCACAAACTGTTGGTCCCTCCCTTAAAATGAGCACATGCTGATTAAAGTAGATGTTGCATAAAAATGAAGCACATATTTTTATGGAGAAAAGGAAATTCAGGAAGAAAATATGTTTGCTTTCAAGAATTTGAAGGGCTGTTAAATGGAGGAGACTTCAGACTTATTTAGAATTTTAATGAGATTTCTCTGAAGCACAACTAGAACAATGTTCTTTATAACAGTTTCTCCTTTCGTTCTATGAAAAAAACCTGTCAAATGGTACACCAAGTGCAGAGTCCGTTGGCCCTAGCTTGCCTTTGCAGCCCAGTGTCTCACTGAGGCTTTCTATGCTCCATTATTTGCTTACTTGGAACTTCTTTCAGCTCCCCCATGTTTTCTTTCCTTGGTTGCCCCTGCCTGGGTCACACAGAAGACTACCCTGTAGTGTGGTTAGTAGTGCACACACAAGACATCTCCATTAGAGTGGGAGCCACCAGATACTATGTGATATAAGTGACAGTAAGCTCATTGATTTTATATTCTCATTGATTAATGTATTTATCATCATTCAGCAAATATTTATAGAGTTTCTACTATATGTGACTCTAACTCATCTTCAGGGCTTGGCCTCAGGGTTACAGTTCTGCTCATCAAAATAGGTGCTCCCCAGAGTGCTCCCACTGTTTCATATCCTGGCATTCATCACTGGTCATTTCATAGATTATTGACACATTTGCACCACCCTCTCTGCTGAAATGGGAGTTGCATGATAACAAGGACTGAGTCCATTACTTCTCTGATGTCTAGCACAATGGTCAGCACACACAGTCAACATTGGGTATCAACATATCATCATTGAATAGTGATTGATAAATAAATTAATGTATACATAAATGCAATGAGTTTTCTGCCAGTTGAAGTATGTTTGCAAAGAAAGGGTGGATCCCCAGCTGATGGGGATCTTTTTAAAAAGTTATTCTTTTTGGCATTATACCAACCATGCTCGGTTGTGGTTGATTTCCTTAGTTCACTTCCCCATTAGACTATGAACTCCTTGAGAACAGGAAGAGTTCTATTTGTCTTTGAAATCCTACAGAACAAGCATACAATCAGTGTTTGGGAAGTGCACAAAATGTCTATTTTCTGAGAATGGATTGTTTATAGAACAAGAATGCTGAGGCACTAAAGAAAAAGTGGCAGTAATGTAATCCGCTTGTTTTGCCAAGCCACTAAAAATACCTTGGTAAATATTAGCTAATGTGCAGCCCTTTGCTTGCTATTAAGATTTACTGATTTCAATAGAAAGGAACCTAAAAACTGAGCATATTATATAACCCAGACACCAGGGACAATCTCTAATCACCTAAGAGTTCATAAAATACATATTGGCTCTGTCTGTGGTTAGATTAAATGCCATTATCTAAAAAAAGTAGGATCTGTGCAATAATAGGTCTGCCATGTGAATGACAGTTTTGGTTAGTGGATGAATTTATCCTGTATCATTGCATTCTCTAAGAATAATCCCTCTCACTCTGAACAAATAAATCAATAGCATTGGCTAACCCAGTGCATGTAAAAAACACCTTCAGTAAATGCCAGGTTTTCCCGAATAATAAAGACTTCCAACAATAAAGACTTCTTTTAAGTCTGTTTCTTACATAACTGTTGTATGGAGAGATTAACATGGTATCTTGTTTCTTCCTGGTGTGATCTTACTTTTGTCTTGTAAATATGTACTTATGTCTGTATGTTCACCTGCATCTTTGTGAACCCTTGGAAAACTCAGTATTTCAGTGGGTTTCAGAGAATAGGCCGGGAGATTGATGATAAGTAAGTGTTTCCGGCCAGTTGTTATTAGGCACAACTTTTAGGAGAAACAAGTGAGCGATAGAGCGTGGCCAAGGAGAGGAAGGCAATGCTGGAACCCAATCCATGCCTGCTGCCCAGAGACCTTAGCTGATGGCTTGTCATGTCTTAGCATGTTGGTATTCAAGCCATGTGATGTTGGAAAGAAAAAATACCTATTCAGCTTGGGGCTTGGTCTGAGAACAACCAATTGCCTTGGTTTAAATCACACGACTCCACTATCAAATTAAGTGTTTCCAAGTTTACACAAATTAGCGTCAGTCCACTGACTGTCGCCTACAATAAATTAGGCTGAGTCTAAAAGAAATCAGTCTGCATAGAAAGACCAACAACCAGCACCACTTCCTTGCTTTTTCCAGCCATGAATGCTTCCAGTCGGAATGTGTTTGACACGTTGGTAAGTGGAGGCTGGGGAAATCACCTCTCTGGAAAGCCAGGCAGATAATGTTTCATCATTAATGCAGTCATGGAAACTCAACGTTATTCAAGTGATCAATCAGGGGGTACTTCTTCACTCTACAGAAATCTTCTTTACCTTTAAAAGTAAAATGAAATTAAGGGAGGCTAGAGGAGCAGGGTGCTGGGAAAAAAACTCAGAAGTTGGTGTGTTAGGAGCCATCTCTGGAATTATAATGTATGACAAAGAGAATGTGGATTCAATTGATAAATGTTGGTTTTAGAATTTACTATTTGAGCTGAGAGTCACTCTCTGGAGAGCTGGGTAAACAGTGTGACCCTGAATGCACCTGGGAGAGAGGTCAGTCCACATGGGTGTAGACCAGGGTAAAGGATGTGTGTACAAGGAAAGGAGAAGACCATTTCCTTCTCTGTACCTCACATGCACCATCCCCTAATCCTCACTGGGGACTTGAGGTCAGTGAGGGCAGTGTGGGATGAGAGGAGGGCCCTCTTGACTATGTGCATTGCTGTTTATTCTCTTGGCAGCATTTTCTTTTTTTATGTCTTTAGAACCTGCCCTCAACATTTCAAATCACCACAGCTGTGGTTTTCTCATCACCGCTTCGACTTGGCGTTGGCTTCTTGTGTTTTCAGCTGGGTTAAGGCCTTGAACAAGACACTGTGGGATATCACTATTATTTAAAATGTATCACTCAGTTGGTTTCGCTTCCTAGTTCTTACGAATAAACACATTTTTCAAGGGGGATTTTGAAATCTATTTTAAAAACATATTTGCATTTAATGAAAAATACCCTGAAGACATTGCGGACCAGGGTGGGCACACCTTGATATTCTTGGGCATGGGGGAGGAGGTAATCTAGCGTTTATGACTTTGGGTTTCACCACTGTCAGGTGTTTATGGGACAGGCCCTTCACCATTTTGCTGTACAATGGAAGTCACAGTAATGTCATCTATAAAAAATCAATTGAGCAAATAGGATTTTGAAAAATGTAATTCATTCACTGAATTATTTCATTTACGTTTACTGAATAAACAGTAGGCACTCATCAACTGTGCTAGCAATTGTGATATAGGAATGAATAAAGTATGGTCTGTCTTTATGGAGTATTACTTAAATCAGTGCTCCCCAGTCCTCCAGCTTTGGAGTAGGGAAGGAAGTGTTAGATGTGTTGATGGTGGCTCTCATACTATTCCTTTTGGGAATCTTGGGAAACCGTGGGGAGAGAGTAGGAACAGGCTTGTAGATTTATGGAGAAGCCCTATGAGACCATCTGGTTGGATCTGAGCTCTGTTCTAAATAGTGTTCAGCATTTAACAAAAAGAAATATGACCAATACTTGTCTGAAAATATTTTAGGGAAGTGTGACTTTAGAATATAACATTTGATAACTGAGACACGGAGTGGTAGAAGCTCCCCTAGACTAGAGGCAGGGAGCCCTATATTCTAGTTGTCATCCTGCCACTGGCTAGGTACATGCATTTGGACAAGTTATTTAAATTTTCTAAATCTCAGTTTTCTCATTTGATAAATGAGAGAACAGAATTGAATTAGGATTTTTCTTGATATATGAGTATCAATAGAAGTACATAGATGATTTAGGTAGTATATTGATGAGTGTTTTATTGGTCAGTTATTCATTTTTCTATATCTCAAAAACATACATAATGCTTCAAGTTTGTGATTTCTCAGAAATTATTGCTTAACATAAGGCTAAACTTATGAGAAGGTGATTTAAGTAATATTCAATAAATAAAAATACAGGTCATAATTGGTTATTACAAACATATTTAAGGTTGTGTGAGACTAATTGAGGTCAGGAAACACTTGAATATATAATCACTTAGTTTGTCTTCATTTCTAGCTCTCTGTAATTATTTTGCCTCTTTATGTTTGAGTAACATGGTCTTCCAGTGGAAAGTTTCTATCAGAAATAGCATTGTGGTATCCAGAATAAACTTGTCAGCTTGCCAAATGATTAGTAACCCAGATAATTTTGAATGATCTTTTCGTAGTTAGGTCTTTCATGTGGGTCACCTAGTTCACTATTGCTATAAACATAATCCTTTTTTGTTTTTCTTTGATGTGTTTTCAG
Seq C2 exon
ATCAGGGTGTTGACAGAAAGTATGTTCAAACATCTTCGGAAATGGGTCGTCACTCGCTTTTTTGGGCATTCTCGGCAAAGAGCAAGGCTAGTCTCCAAAGATGGAAGGTGCAACATAGAATTTGGCAATGTGGAGGCACAGTCAAGGTTTATATTCTTTGTGGACATCTGGACAACGGTACTTGACCTCAAGTGGAGATACAAAATGACCATTTTCATCACAGCCTTCTTGGGGAGTTGGTTTTTCTTTGGTCTCCTGTGGTATGCAGTAGCGTACATTCACAAAGACCTCCCGGAATTCCATCCTTCTGCCAATCACACTCCCTGTGTGGAGAATATTAATGGCTTGACCTCAGCTTTTCTGTTTTCTCTGGAGACTCAAGTGACCATTGGATATGGATTCAGGTGTGTGACAGAACAGTGTGCCACTGCCATTTTTCTGCTTATCTTTCAGTCTATACTTGGAGTTATAATCAATTCTTTCATGTGTGGGGCCATCTTAGCCAAGATCTCCAGGCCCAAAAAACGTGCCAAGACCATTACGTTCAGCAAGAACGCAGTGATCAGCAAACGGGGAGGGAAGCTTTGCCTCCTAATCCGAGTGGCTAATCTCAGGAAGAGCCTTCTTATTGGCAGTCACATTTATGGAAAGCTTCTGAAGACCACAGTCACTCCTGAAGGAGAGACCATTATTTTGGACCAGATCAATATCAACTTTGTAGTTGACGCTGGGAATGAAAATTTATTCTTCATCTCCCCATTGACAATTTACCATGTCATTGATCACAACAGCCCTTTCTTCCACATGGCAGCGGAGACCCTTCTCCAGCAGGACTTTGAATTAGTGGTGTTTTTAGATGGCACAGTGGAGTCCACCAGTGCTACCTGCCAAGTCCGGACATCCTATGTCCCAGAGGAGGTGCTTTGGGGCTACCGTTTTGCTCCCATAGTATCCAAGACAAAGGAAGGGAAATACCGAGTGGATTTCCATAACTTTAGCAAGACAGTGGAAGTGGAGACCCCTCACTGTGCCATGTGCCTTTATAATGAGAAAGATGTTAGAGCCAGGATGAAGAGAGGCTATGACAACCCCAACTTCATCTTGTCAGAAGTCAATGAAACAGATGACACCAAAATGTAACAGTGGCTTTTCAACGGGAGTAAAGCAAAGTCTCTAAAGCTCCTAGTACCTAGAAGCATTATGAAGCAGTCAACAATTTAGGGGTACGAAAGTAGGATGAGAGCCTTCAAAGTCTACCAGCACAAAGACCCCTGAGCCCCGCAATTGTGATCCCACAAGACATGCATCTCCACAAGGCTACTGTATTAGAACGTGCAATGCATTTATATGAAACTGGTGTATGGAAGACATAGGTGCTCTCTTGAAATCTTAAATATGATTATTTGAGCTCATATAAGGTGGATTGGAGCAGATAAAATTATCAAAAGTTTCATGAACAGGCCAAACAAAATATTTTTTAAAGTTTCCTTAAAGAAGTTATGAACTTTAGAAAGGATCAGGGGACAATAATAATCTCATTTTGATTCTACTGATAAGAATGACTCCACTTTTAATGTGGACTTTTACTCATGGAAAAATTGTCTCCTAATTTGGGGAGATGAACCAACCAATCAATGACAAGAAAACGCTTACACAAAGAACAATTTGAGGCTCTAAGCTTCTCATGTGGTACGTTTAGACAGAGGCTAAATCTGCACACTAGAATCTTGATGATACCTTCCTGCAAGACAGAATGCTTTAGTTAAAAGTGGTGATGATATTTCTTTCAATCTGTATTGGATGGCTTAAAGGGCTATAAATCTGTTTATAAAGAGCATTTCCTGCTCTTCGAAGACAGCAATGAGGAGTTGGAAGGTGCAAAGTCAGTAGAGAAGGGAATGTATCATTAATGCACCTGAGAAGAAACAGTTTCATGTGTTCCTCCACCTAGAGTTTGTACTGGAATGCTATTTCTAAAGAAGAAGTGGGAAAGAGAGAGGAATGGGATGGAGCCCCACAGTCAGAATGTTACTATGTCTTTCTTTCCCTGACAGCCCATCTTCCTAAAAGGGACCAGCTTATGGAAGGCTCGACCTTGAGGGGAAAGTTT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151704:ENST00000324036:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.005
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF0100715=IRK=WD(100=90.6)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains