MmuALTA0020565-1/2 @ mm9

Alternative 3'ss

Gene

ENSMUSG00000047342 | Zfp286

Description

zinc finger protein 286 [Source:MGI Symbol;Acc:MGI:2384758]

Coordinates

chr11:62594241-62597263:-

Coord C1 exon

chr11:62597174-62597263

Coord A exon

NA

Coord C2 exon

chr11:62594241-62594401

Length

0 bp

Sequences

Splice sites

5' ss Seq

CAGGTAGGT

5' ss Score

10.28

3' ss Seq

CATTTGCAATGTCTTTTCAGACA

3' ss Score

7.09

Exon sequences

Seq C1 exon

GGCTTCCCATTTCCAAACCCGATAACTATAATTCGGAAGATGGAAAAGAACTGTCGAAGCTTGAGAAGTCTCCCAAGTGCAGTGACTCAG

Seq A exon

NA

Seq C2 exon

ACATGGAAACCAGACCTGAGAGCAAGGAGTCAACTTCAGTGCTAGACTTTTCCAAAGAAGAGTCAAACAGACTGACAGAAAATACTGCTTCTGACTCCGACATTGAAACTGCTCTTGAATGTGAGCGTTGGCTAGAACATCGTCAAAGAAATCGGGAGAGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000047342-6-9,6-8-1/2

Average complexity

Alt3

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.581 A=NA C2=0.273

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4)

Main Inclusion Isoform:

ENSMUSP00000055517