MmuALTD0016196-1/3 @ mm9

Alternative 5'ss

Gene

ENSMUSG00000059689 | Zfp637

Description

zinc finger protein 637 [Source:MGI Symbol;Acc:MGI:2448537]

Coordinates

chr6:117793271-117795230:+

Coord C1 exon

chr6:117793271-117793410

Coord A exon

NA

Coord C2 exon

chr6:117795043-117795230

Length

0 bp

Sequences

Splice sites

5' ss Seq

TCAGTGAGT

5' ss Score

7.68

3' ss Seq

CTTCCCTCTCGTTTTACCAGATG

3' ss Score

11.04

Exon sequences

Seq C1 exon

GTTCTCCAGACCAGCCCATGGAAGAATCATATGAAGAGGCGGTGATCAAAGTCAGCGAGCAGGAGTGGACATGTTTGGGTTCCCAACAGCTACCCTGCTGGACTGTCATGGAAGATACGCCCAGAATGTAGCCTTTTTCA

Seq A exon

NA

Seq C2 exon

ATGTGATGACAGAAGCCCACAAGTATGATCCTTCAGAGGCCACAGGATCCTCAAGCTGGGATTTCCAGAGCTCTTTCAGAAGAGAGAAGCTGGAACAAAAGTCCCCGGAGTCTAAGGCCCTCCAGGAAGACTCACCTGGAGTGAGGCAGAAGGTCTATGATTGCCAGGAATGTGGGAAGTCTTTCCGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000059689-5-4,6-4,7-4-1/3

Average complexity

Alt5

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=NA C2=0.118

Domain overlap (PFAM):

C1:

NO

A:

NA

C2:

PF134651=zf-H2C2_2=WD(100=10.0),PF079757=C1_4=WD(100=21.6),PF134651=zf-H2C2_2=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=10.4),PF0013017=C1_1=WD(100=26.0),PF134651=zf-H2C2_2=WD(100=10.4),PF134651=zf-H2C2_2=WD(100=9.6)

Main Inclusion Isoform:

ENSMUSP00000108482