MmuEX0053484 @ mm9

Exon Skipping

Gene

ENSMUSG00000050605 | Zfp61

Description

zinc finger protein 61 [Source:MGI Symbol;Acc:MGI:99663]

Coordinates

chr7:25076058-25080100:-

Coord C1 exon

chr7:25079974-25080100

Coord A exon

chr7:25078364-25078453

Coord C2 exon

chr7:25076058-25077523

Length

90 bp

Sequences

Splice sites

3' ss Seq

TGATTTTTGCATGTTCACAGAGT

3' ss Score

7.58

5' ss Seq

CAGGTGAAA

5' ss Score

5.07

Exon sequences

Seq C1 exon

GAGGCAGTAACATTCAAGGATGTGGCTGTGGTCTTCACTAAGGAGGAATTCAGGCTGCTGGACTCCGCCCAGAGGACGCTGTACCAAGATGTGATGGTTGAGAATTTTCGGAACCTGCTCTCAGTGG

Seq A exon

AGTATCAACTTTTCAAACGAGATAAACCATACCTGGAAAGAGAAGAGAAGCCTCAAATGAGGAGGGCAGCCCCGAGGGAGAGAGATTCAG

Seq C2 exon

GGATTAACGGTCAGAGTGCGAGAGGAGCAGTCCGAGGGAGAGGGTCACCTGAAGCCCTTCCCTGCTGGCAAATCTGGCAGTGGGTCACGGACGACTTAACCACGAGTCAAAACTCTGTGGTAAATACTCCTCAGCTACAGGGCAAGGCTCCCTGCCAGTCCAGGCCAAGGCCATCTGCTCCCGTTTCTGTAGATGAGAACTATATAAAGAGTCATACAATAAGTGTTCCCATCCACTCCGGAAGGCCCCCACTTCCCACTTTGAGAGCCCAGGGAACTTCCCTGACTGAGCGGCAGACTCGGAAGGATCAGTACCACCAAGGCTCCCACAGAGATGAAGCGGGTCAGAGGAAACGGGATGCTCACCCTACAAGTTGGATTCCACGTCCCCGCTCTGATCACAGAGTATGCAAAAGTAAGGGGCGGTGTAGCCCCAGTGATCATGGGAGAGACGGGGTGGAAGTGGTGCCATTCGACCAGAATGGAGGGATTCACACTAGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000050605-'9-15,'9-14,11-15

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.613 C2=0.430

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF079757=C1_4=WD(100=11.0),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=5.4),PF134651=zf-H2C2_2=WD(100=5.2)

Main Inclusion Isoform:

ENSMUSP00000076954