MmuEX0053486 @ mm9

Exon Skipping

Gene

ENSMUSG00000044676 | Zfp612

Description

zinc finger protein 612 [Source:MGI Symbol;Acc:MGI:2443465]

Coordinates

chr8:112607557-112614081:+

Coord C1 exon

chr8:112607557-112607683

Coord A exon

chr8:112608244-112608351

Coord C2 exon

chr8:112612322-112614081

Length

108 bp

Sequences

Splice sites

3' ss Seq

GTTTCCTTTCCCCGAATCAGGAT

3' ss Score

7.6

5' ss Seq

CTGGTAAGG

5' ss Score

9.68

Exon sequences

Seq C1 exon

AAGTCGGTGACCTTTGAGGACGTGGCTGTGTACTTCACCCAGACGGAATGGGATGGTCTGTCTCCTGGGCAGAGAGCGCTGTACAGGGATGTCATGCTGGAGAACTATAGGAACCTGGCCTCTGTAG

Seq A exon

GATTTCCACTTCTCAAACCTGCTGTGATCTCACAGCTAGAGGAACGAAAGGATCTGGAAAACCTGTTTCAGCTGGCCACTGGAACGGACTCCCAGGGCCTCTGGACTG

Seq C2 exon

AATGTACTGCTGTCCAGTCCGGCAATAATCTGACAAAAGAAGTGCATGAAGAAGAAAAGAGTACATTATTTGAACTTCAGAAGGACTTTTCTCAGGAAACAAACTTTTCAAAAACGTATATTTTGGGCCAACAACAGGAAATCCGGTCAGCAGGAAGTGAGAGGGGGAGTGCCAGTGCCACCGATGGAAGAGCTAAGGCGAGCTCTGTGGAAGGGTGTTTGTTTAGTCAGACTCCACAATTGTCCCAGGATCATACCAGCTCCACTGGAGAGCTATATTCTGATACCAAACTTAGTAAGAGTGAAAGAATCACTACAGAGGAAAGACCTCTGAAACCCAGAGAATTAGCAGAGGCTTCTCAAGGCAGCCCTCAAGTTAATCAGCTTCCAGAGATCTGTGATGTGGAGAAGCCCTACCAGTGTGCAGAATGTGGCAAAGCCTTCAGTGTTAAAGCCAAGTTCGTCTGGCATCAGAGACTTCATAATGGAGAGAAACCTTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000044676_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.027 C2=0.148

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.3),PF0062824=PHD=WD(100=9.2),PF134651=zf-H2C2_2=WD(100=4.3),PF0009621=zf-C2H2=WD(100=3.9)

Main Inclusion Isoform:

ENSMUSP00000062474