MmuEX0053727 @ mm9
Exon Skipping
Gene
ENSMUSG00000072774 | Zfp951
Description
zinc finger protein 951 [Source:MGI Symbol;Acc:MGI:2441896]
Coordinates
chr5:105244079-105246142:-
Coord C1 exon
chr5:105246016-105246142
Coord A exon
chr5:105245718-105245778
Coord C2 exon
chr5:105244079-105244454
Length
61 bp
Sequences
Splice sites
3' ss Seq
TTTTTGGTACTATGTTTTAGGCT
3' ss Score
8.17
5' ss Seq
AAGGTAATT
5' ss Score
8.83
Exon sequences
Seq C1 exon
AATGCAGTGACATATGAGGATGTGCATGTGAACTTTACTCGGGAAGAATGGGCTTTGCTGGATCCTTCCCAGAAGAGTCTCTACAAGGATGTGATGCTGGAGACCTACAGGACCCTCAGAGCTATAG
Seq A exon
GCTGTTATTGGGAAGACCACAGTAATGAAGAAAATTCTCAAACTTCTAGAAGACATGGAAG
Seq C2 exon
GCATCTTCAAATGGAAGACAGAACTCATACTGGAGATAAAAGCTATGAAGGTGTGCAATGTAACAAAGTGCTTTCGAGTCACAATCATGCTCAGATATATAAAGGAATGCTTACTGGAGCCTTTGTACTTTATACTGGTGGTCAAATGCATAGCAGAACACAGGCAGGGGATAAGCCCTGTGACTGTAACACACTTGGTAAATCCTGTACATGCAACAGCCATCTGCAAAGCCATAAAAGAACAGATACTAGAGAGAATCCTTATAAATGTAATCACTGTGGTAAAGCCTTTGCTCGTCACAGGGATCTTCAAAACCATGAAAGGACACATACTGGAGAGAAGCCCTATGAATGTAAGCAATGTGGTAAAGCCTTT
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000072774-'2-2,'2-1,3-2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
Show structural model
Features
Disorder rate (Iupred):
C1=0.000 A=0.524 C2=0.140
Domain overlap (PFAM):
C1:
PF0135222=KRAB=WD(100=95.3)
A:
PF0135222=KRAB=PD(0.1=0.0)
C2:
PF134651=zf-H2C2_2=WD(100=20.6),PF134651=zf-H2C2_2=PU(88.5=18.3)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Human
(hg38)
No conservation detected
Rat
(rn6)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GACCTACAGGACCCTCAGAGC
R:
AGGCTCCAGTAAGCATTCCTT
Band lengths:
148-209
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types