MmuEX1028441 @ mm10

Exon Skipping

Gene

ENSMUSG00000046658 | Zfp316

Description

zinc finger protein 316 [Source:MGI Symbol;Acc:MGI:1860402]

Coordinates

chr5:143249697-143264142:-

Coord C1 exon

chr5:143264051-143264142

Coord A exon

chr5:143262793-143262906

Coord C2 exon

chr5:143249697-143255565

Length

114 bp

Sequences

Splice sites

3' ss Seq

CCGTCTGTCCTCCTGGGCAGGAT

3' ss Score

9.79

5' ss Seq

CGGGTGAGT

5' ss Score

9.89

Exon sequences

Seq C1 exon

CCCTACAGACCTCCCGGGTATCTCCCACTACTCAGGATGAAGATGTGGAGGAAGAAGAGGAAGAGGAAGATGAGGAGCATTTCCTGACCCAG

Seq A exon

GATACCCAATCCCTAAGCCAGATCTGATCTTCCACCTCGAACAAGGAGAAGAACCTTGGGTTGAAGATGGCCCCCATCCCGAGGAGGGAGATGTCGTCACTGGTGTCTACACGG

Seq C2 exon

GAGCCTGGTTCTGGAACGATGACATAGAGGACCACGAGGAGGAAGATGACGAGGACTTCCTTGCTGAGGTGGCTGAGGAGGAGAATGAGCCCCCGGGGCTATGGTCTGCTGCCTATGGAGTGGGGGATGTGCCTGGGACTTGGGGCCCCGACGACTCGGATTCGGTGCAGACTCCAGAGGGTTGGGGACCCAACCCAGGCAGTCTCGGTATCCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCTGGCCGGGAGCCTGGGGAGAACTTTCTGGTGCCCTGGGCATTTCCCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCGCACCGTTCCCGCCTGGCCAAGCACCAGCGCTACCACGCAGCGGTCAAGCCCTTCGGCTGCGACGAGTGCGGCAAGGGCTTTGTGTACCGCTCGCACCTGGCCATCCACCAGCGCACCCATACCGGCGAGAAGCCCTTCCCGTGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000046658_MULTIEX1-3/3=C1-C2

Average complexity

C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=1.000 A=0.538 C2=0.418

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3)

Main Inclusion Isoform:

ENSMUSP00000059418