RnoEX6063498 @ rn6

Exon Skipping

Gene

ENSRNOG00000001094 | Zfp316

Description

zinc finger protein 316 [Source:RGD Symbol;Acc:1311647]

Coordinates

chr12:13354938-13364338:+

Coord C1 exon

chr12:13354938-13355064

Coord A exon

chr12:13355491-13355604

Coord C2 exon

chr12:13361973-13364338

Length

114 bp

Sequences

Splice sites

3' ss Seq

TCTGTCCCTCTCCTGGGCAGGAT

3' ss Score

9.82

5' ss Seq

CGGGTGAGT

5' ss Score

9.89

Exon sequences

Seq C1 exon

GGCCTGGTGACTTTTGAAGATGTGGCTGTGTACTTCTCTTTGGAGGAGTGGGAGAGGCTGGATGTGGACCAACGGGACCTCTATCGGGATGTGATGCAGGAAAACTATGGGATCCTGGTTTCCTTGG

Seq A exon

GATACCCAATCCCTAAGCCGGATCTGATCTTCCACCTCGAACAAGGAGAAGAACCTTGGGTCGAAGACAGCCCCCATCCCGAGGAGGGAGACGTCGTCACTGGTGTCTACACGG

Seq C2 exon

GAGCCTGGTTCTGGAACGACGACCTAGAGGACCACGAGGAGGAAGATGATGAGGACTTCCTTGCTGAGATGGCAGAGGAGGAGAATGAGCCCCCCGGGCTGTGGTCTGCTGCCTATGGAGTGGGGGATGTGCCTGGGACTTGGGGCCCCGACGACTCAGATTCGGTGCAGACCCCAGAGGGTTGGGGACCCAACCCAGGCAGCCTTGGTATTCTGGCGGAGGAGGTTGAAGCAAAACATTTCCTGTCCGGTCGGGGGCCTGGGGAGAACTTTCTGGTGCCCTGGGCATTTCCCGCAGTGGCTGTCCCCATCGGATGTCCGGAGACCACTTGCGATGTGTGCGGCAAAGTGTTTCCTCACCGTTCGCGCCTGGCCAAGCACCAGCGCTACCACGCAGCGGTCAAGCCCTTCGGTTGTGAGGAGTGCGGCAAGGGCTTTGTGTACCGCTCGCACCTGGCCATCCACCAGCGCACGCATACCGGCGAGAAGCCCTTCCCGTGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000001094-'2-11,'2-6,3-11=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.023 A=0.538 C2=0.419

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=2.9),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.3)

Main Inclusion Isoform:

ENSRNOP00000045973