MmuEX6023466 @ mm9
Exon Skipping
Gene
ENSMUSG00000026131 | Dst
Description
dystonin [Source:MGI Symbol;Acc:MGI:104627]
Coordinates
chr1:34231542-34240989:+
Coord C1 exon
chr1:34231542-34231640
Coord A exon
chr1:34234641-34237343
Coord C2 exon
chr1:34240861-34240989
Length
2703 bp
Sequences
Splice sites
3' ss Seq
CCTTTAAATGTTTCTCGCAGATG
3' ss Score
9.45
5' ss Seq
GAGGTACAC
5' ss Score
5.99
Exon sequences
Seq C1 exon
TTCATGGACCTACGGACACGGTACACTGCCCTGGTCACTCTTATGACGCAGTATATTAAATTTGCTGGTGATTCGTTGAAAAGGCTGGAAGAGGAGGAG
Seq A exon
ATGAAAAGGTCTAAAGAGAATTCTGAGCACGGGGCGTATTCAGATCTACTGCAGCGTCAGAGAGCAACCATGGTTGAGAATAGCAAACTTACCGGGAAGATCAGTGAACTGGAAACAATGGTGGCTGAGCTAAAGAAACAGAAATCCCGGGTCGAGGAGGAGCTTCCGAAAGTTAAGGAGGCCGCCGAAAATGAACTGAGGAAGCAACAGAGGAACGTGGAAGACATCGCCCTGCAGAAGCTGAGGGCCGAGAGCGAGGCCAAGCAGTACCGCCGTGAGCTGGAGACGATCGTGAGGGAGAAGGAAGCTGCCGAGCGGGAGCTGGAGCGGGTGAGGCAGCTCACGGCGGAGGCGGAAGCTCGGCGAGCCGCGGTGGAGGAGAACCTCCGCAACTTCCGGAGCCAGCTGCAGGAAAACACCTTCACCAGGCAGACGCTGGAAGATCATCTGCGGAGGAAAGACTCGAGCCTCAGTGATCTGGAACAGCAGAAACGGGCCCTGGTGGAAGAACTGCAACGAAAGCGGGACCACGAGGAGGAGCTCCTGCGACTGGTGAAGCAGATGGAGCGGGACCTGGCCTTCCAGAAGCAGGTGGCCGAGAAGCAGCTGAAGGAAAAGCAGAAGGTCGAGTTGGAAGCCAGAAGGAAAATCACCGAAATTCAGTTTTCATGTAGAGAGAGCGCTGCGGTGGCACAGGCACGGCCCCAGAGGGAGCAGGGCAGACAGAAAGAGGAGGAGCTGAAGCAGCAGGTGGATGAGCTGACCTTGGCCAATAGGAAGGCAGAGAAAGAGATGAGGGAGCTGAAGTATGAACTCAGCGCGGTCCAGCTCGAAAAGGCCTCGTCTGAGGAAAAGGCCCGGCTGCTGAAGGATAAATTGGACGAGACGAATAACACACTCAAGTGCCTCAAGGAAGATCTGGAAAGGAAGGATCAGGCCCAGGAACGCTATTCCCAGCAGCTCAGAGACCTTGGCAGGCAGCTGAACCAAACAACAGACAAAGCTGAAGAGGTCAGGCAGGAAGCAAACGATCTCAAGAAAATAAAGCACACCTATCAGTTGGAATTAGAGTCTCTCCATCAAGAGAAAGGAAAACTCCAGAGGGAAGTTGACAGAGTCACCAGGGCGCACGCACTAGCCGAGAGGAACATTCAGTGTTTAAACTCCCAAGTTCACGCTTCGAGGGATGAGAAGGACCTCTCAGAAGAGAGGAGACGGCTCTGCCAGAGAAAATCAGACCATTTAAAAGAAGAGTTTGAGAGGAGCCATGCACAGTTGCTTCAGAATATTCAAGCCGAGAAAGAAAATAATGATAAAATCCAAAAGCTGAATAAAGAGCTGGAGAAAAGCAATGAGTGCGCAGAAACGCTCAAGCAGAAGGTGGATGAACTCACTAGGCAGAATAATGAAACCAAATTGATGATGCAGAGGATTCAGGCAGAGTCCAAGAACATAGTCCGCGAGAAGCAAGCCATCCAGCAGAGATGCGAAGTGCTGCGGATCCAGGCAGACGGTTTTAAGGATCAGTTACGGAACACCAACGAACACTTGCATAAGCAGACAAAAACAGAGCAGGATTTCCACAGAAAAATTAAAAGCCTCGAAGATGATCTAGCCCAAAGTCAAAACCTAGTAAGCGAGTTCAAGCAAAAGTGTGACCAGCAGAGCATGATCATCCAGAAAACGGAGAAGGAGGTGAGGAGCCTGAGCGCAGAACTGAGCGCGTCCAAAGAGGAGAAGCGGCGGGAAGAGCAGAAGGCTCAGCTGCAGCGAGCTCAGGTGCAGGAGCTGAATGACAGGCTGAAGAGGGTGCAAGACGAGCTGCACCTGAAGACCATCGAAGAGCAGATGACCCACAGGAAGATGATCCTGCTCCAGGAAGAGTCGGATAAGTTCAAACGCTCGGCAGATGAGTTTCGGAAGAAGATGGAGAAGCTAATGGAGTCCAAGGTCGTCACTGAAACCGATCTCTCAGGCATCAAGCACGACTTTGTGTCTCTCCAGAGAGAAAACTTCCGGGCGCAAGAGAACGCGAAGCTGTGGGAGACCAACATTCGAGAGCTTGAGCGGCAGCTTCAGTGCTACCGTGAGAAGATGCAGCAAGGCCCGCCCGTGGAAGCAAACCACTATCAGAAGTGCCGGAGACTCGAGGAGGAGCTGTTGGCCCAGAGACGGGAAGTTGAAAACCTCAAACAAAAAATGGACCAGCAGATAAAGGAACATGAGCACCAGTTGCTTCGGCTCCAGTGTGAAATCCAAAAGAAGAGCACAACCCAAGACCACACCTTCGCGTCGGCTTTTGATACGGCAGGGAGAGAGTGCCACCACCCTGCAGAGATCTCCCCTGGGAACTCTGGGCACCTTAACCTAAAGACCAGACTCCCACTGTCCAGGTGGACTCAGGAGCCACACCAGACAGAAGGAAAATGGCCGCACAGGGCTGCTGAACAACTTCCGAAGGAGGTTCAGTTCCGACAGCCAGGGGCTCCGCTGGACAGGGAGAGCAGCCAGCCATGCTACTCGGAGTATTTTTCTCAGACAAGCACTGAACTGCAGATAACTTTTGATGATAAAAACCCAATCACGCGACTGTCTGAACTAGAGACGATGAGGGAGCAAGCCCTGCATCCCTCCAGACCGCCGGTGACGTATCAGGATGACAAACTTGAAAGGGAGTTGGTGAAGCTTTTGACACCCTTAGAG
Seq C2 exon
AAGTCACTGGATGAAGAGAAGAAACAACATATTGAAAAAGCTAAAGAATTGCAGAAATGGGTATCAAATATCAGCAAGACCCTGGGAGATGGGGAGAAAGCTGGGAAACCTCTCTTCTCTAAGCAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000026131-'55-54,'55-51,57-54=AN
Average complexity
A_C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (No Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.106 A=0.534 C2=0.465
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs: