MmuINT0071353 @ mm9
Intron Retention
Gene
NA
Description
NA
Coordinates
chr9:105766476-105778327:-
Coord C1 exon
chr9:105778119-105778327
Coord A exon
chr9:105767166-105778118
Coord C2 exon
chr9:105766476-105767165
Length
10953 bp
Sequences
Splice sites
5' ss Seq
CTGGTAAGC
5' ss Score
8.69
3' ss Seq
CTAAAGTTATTCTGTTGCAGAAC
3' ss Score
5.83
Exon sequences
Seq C1 exon
ATTGACTGCTAAGCTGCGTGAGGTTCCTGAGAGCACAATCAGCCTGGCTGATCAAGAGCTGAACGCTGGGAAAGACTCATCTTTTGTGTTGGAGGATCACAGAGGCGACCATTTGGTTTACGTTCCAAGCCAGATGCTAGAGCCACATAAGTTAGTGAGCCACTATGGAAATGACCGGGAATCTGTAGCAATGGCGAGTCTCACTTCTG
Seq A exon
GTAAGCACATGGACTAATGATGGAATCTTTTCAGTCACGCAGAGCCTTGACTTTTAATATTAGGATTGAATTCAATAAACTGAGGCTAGACTCTGAAACAATTAAGGATGGTGGATTCAGTGGCAATTATCAGAGCAACAGAAGTAGCGGATGACAGGTACAGCCATGGGAATCACTGAGCAAGGTCTCAGAAATTTTCATGATGTACTTAAAGAAATTAGAGCATGCAATTCAGAAGGTTGGTTTTATTCAGAACACGAAAATATAAAGAATATCAGAGCAAACATGAGATCAAAACAACCTCCAAACCTTGGCCTGGCCATTGCCCCAGGATTTGTGCTTACACAAGGTTTAAGTTTTATTTTTTTTGAGATACCCAGAAATGGCAGAGTGTGCAATTCCCCCATGGCTTACTCTAAATATTTTAACGTCAACATTTTAATAGCTTAAAACCAACTAATATGTAAGATAATAAACACATAAGATACATAAAGGTATCTTATTTTCATTTGAAAATGTGAGGGGCTGAAGAGGTGGCTCAGCGGCAGGGAGCATTCCTTGTTCTTGCAAAGGCCCAGAGTTTGATTCCTGGTACTCACATGGCAGCACAGAGTCATCTGTAATTTCACTTGCAGAGGATCTGATGCCCTCATCTGGCATCTGCATGCACTGTACCCACATGGTGCATAGCCATGCATGCAAGCAAAATACCCATACACATAAAAGTAAATACATAGTCAATATTTTTTTAAACTGTGAAATGTCAAACAGACTCCTCAGCCATCCAAACCCTGCATCTAGAATCTTCCAAAATAACCATTTGGCCAGGACGTTGCATTTTAAGTATTGTATCCAATGTATCAGATGCATGACTAGAATATGCAAATATAAAAGGAAAAAGGTAGCCTTCACACCATATTATTGATTCTTTGAAGCTTCCTGGATAGCTCTTCCTTTTCTTAGATTTAACACTTGTGTTCCCATAAGTATTTCGGAAGTATAAGCATTTGAACTGTACTTTTAAAGTAGCCAAACTAGCTTTTGTAAAGCTACAGTAAAGAATTTAAAAGCTAATCAATCATCAGTTGAAAAATAAGCTGTGTTAGCTTTAAAAAGAAGATTCTCAGTAAACCTGGACGTGTGGTGTCTATGTATTAAGCCTGTATGTGACTTCATTAAGGCAATTTTAAACTCTTATGTCGGCATAGCCTGCACAAGAGAGTTAGGTGCTCTTTTAATAGGAATTGTGTTGATTTTGTTTGTTCACTTAATGGTACGGGATTACAATTTTCCTCAAGGCACAGGAATCCATTCTCGCCTGGCTTAGAAGAGGGAGATGCATTTTGGCAGAGGGTCAGCGTGGGAAAGGGTAGAGTGTGATGGCTTTGTTAGAGGCGACCATTCCCAAGTCTTGGAAATGGATCAGAGAAAGCAGAGGAGAGAGGGAGACAGAGAGAGAGAGGGAGAGAGAAAGGGAGAGAAGGGGGGAGAGAGAGAGAGAGAGGGAGAGAGAGATGTTGCAACCATCATTACTGATACAATAATAGCAATTTAAGAAGAAAAGAAAGACTTTTCACTTGGCTTTCCAGGTGTCTGTACAGTCCAGAACCTTGCAGCCACTGTGGGGTTCAGTTTGGTTAAAGAAATACCTGTTCACATTTCTATCAGGAGGATAAAAAGTAAACGGTTACCCCACCAAAGTTCTGAAGTGTGTGTGTGTGGGATTCCTGTAATGGACTGTGGGTAGTGATAGTCTGGGAATAGTGTCTCAGGCCCAGGGATGTCATGTTTATGTCTTTAGTCCCATAAGTAAATCTGAGTCTCAAATGTCTGTCTGTCTGTCCGTCTGTCTGTTTCTGATTCTCCCCATACTGCCATCACTGCCGTGCCTTGCCCTGCCCTGCCCTGCCCTGCCCCTCCCCGCCCTTCTCTTCTCTCTCAAATCTTTTGTAGCCAGTTGCCGAAAACCTGCTAAGGACTCCTTCTGGGGTCAGTTGTGATTCCAAACCTTTAGTCACTGAGAGCTAAGCCTTCGTAAATTCCAGATGCATGGTACAAATTAGTTGATAACTTTGATGAGTGCCTCCATATGCTGTGTGTCTACTACTCATTTATCATGTAATTCTTGCAGCTGATGGCTGACCTTTCTGTCCTTGAGTGGAGAGGCTTGAGGGAAAGTCTGTGATCTCAACCATTTAAGAATTTTACAGTTCCTGTGCCCTGTTGGCTGGCAGCGGGTTGTCACCCTCTTCCACAAGATACCCAACCCCTGCCTGTCTCCCCCAGTTAGCCTCTCACTTAGCTGCTTCTGCCTGCTCCAGCTTGCATTGAGCTCATCCCCAGTCCCACTCTATGAGGCTATATAGATTCTATATGATCTCTGGTGTGAGATCCACTGTTCACGTGACTCTTACAGTGAGGTTCCTCCTTTCTGGCAGAAGCACCTGGGAACTCACTAGAAATGAATCCTGTAAGTGTTCATTCTGGACCTAGTCAATCATTTTGGGGTAGTGGAGCCCCCAAAATGATGTGTTTAAATGTTTGTGCATTTGTTTCTTTGTTTAGTGTGTGTGTATGTGTGTGTGTGTCTGTGTGTGTGTCTCTGTGTATGTGTGTGTCTGTGTGGTGTGTCTGTGTGTCTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTTGCAATAACCATTGTCTATGTAGAGTGTTAGAGGACAACTTGGCCAGAGCTAGTTTTCCTTATACCATGTGGGGTCTGAGAATGTAACTGCGGTATCTGGAGACTTGTTTTTTGCAATAGCTGAAGAGGGATTCTGGCATCTGGTGTGAGTGGAGGCCTGCAGCATCTCCATCTGCCCATTGCTGCCCCATCATTACTCCAGGATCTTAATTAAAAAAAAACAAAAACAAAAACAAAACTCAAAGGAACCATAAAGTGATAATAAAAATTTGAACATAAACCTTCAAAAGCATTTATCAAACACCTTTTTTTTAAGTGTTGAATGCGTCCTTTGTCTCCCTGGCTTTATTCAACTGCATGTTCTATTTTTTCACACGGTATCATGTCTAACATTGTCCAAATTGCTATAAACTCCATCCTGATTTTTCTAAACACTCTCATAATGCCCCTCCAACAAATGGATATATTTAGCTATGGACCTCTTCTTAAACATGTCATTTGATTCTGACTTTTGCTGCTCCATATTCAACTTGCACATACATGCACTTTAACGTAAATGTGCATTGGATGGCAGAGTTGGCTTCCGAGCCATCCCTGGAATGTCAGTCAGCTCATGTTCTGCATTGCATCAACCTCTGGTCACCTGCACCGTCGACCTGACTGTGGTTGGTGGTGGCTCCGTGGTCACTTATAAATGGTGAAGTACATTCATTTACCAAATCTGAAAACAACATAAATTGCATCATTATTTTGGAGAGTTATTTTCAAATAATTTTGGCGATATAGTTCTGGTGTTTAAAATTTTTTCCAATTTAATTTTTAAAGCTTGCTTATAATAAACCCACCTAGAAACATAAAGCACAGAGTGACTTCATTTAAAACCGGAGGGCACGTGTCTGCAGGTGTTTTGGGTGCAGAGATTCTCGAAGGAGGCAGGGCTTCTCCCCAGGAGGCAGGCCTTTTCTGCCGACTCTTGTTTCTGAGCACAGAATGGTTCGGAAGTGATGTTCTGACGATCTGAGAACCACCTAGAAAAATCAAGGCCAAGAAGACCATTGGGCCTATCCTCAGGGAAAAGAATGAAACCTGTTTTCAAGTTTTGTCTACTTAAACGAGAAGAGGTTCTCCCAGAAAAACACGGGGCGTGTAAGGGTTTCTGTTTCCGCATGACATGTTAATGGCATACAGTGGTGTGCACAAGCTGTGCCTGCCTCCCCTGCTTTCCCGGCCCAGCCCTGGGACCCTGGCCAGTGACCTCACCAGACAGAGGGGAGGAGAGGCCCGGGCTGCGGGTGTGAGATGGAGAGGCGCATAAAGTGCTGCCAAGTCCTCTGCAGATATGCCTGCGAGAACACAGTGGGCTCGTCACTTCTGGGGCTCGTGTGAGTGCGTCTGTAAGTTAGGCCAACAGGCTGCATTTTCTTTTCTTATCGAAGTTCTGAAGAATTTACCATTGCAGGGAGGACTTTCGTAGCCCTAGGAGTTTTCTTCTTGTTTACTTATAAAGATTAAATTTGTGAACACTTTAATTTGTTGTGAGCTTTGCAAACTATTCCATTTTTTTCCTCAAAAACCTCATGGAATTGTTGTGTATTAGCATGGCACTTTGTAGAGAGGAATGGAGTGATGGAGAAGAGCCGGGGTCACTGAATTAAAAACAGGCAGAAATAAGACTCCAGCTCCTAAGACCTGTCCATAACCACCGCTCTGCAATGCCTACTGGAGGAAAAGGAAGGCCGATTTTATTTATGTCATGACATACTTTTAGAAGAAAATATTCCCTCATGGCCTCTGTCAGAGAGAATGCCAATAGACTGAAGACGACTTTCTTCTCATCAGGTCCCTGAGCCTTTCTCGCCCTGGTTAGTGTGTACTTCACTATTTCTTCCCTACCCTGATGTTTGACGACTCCTCCTTCTGAAGGAGTCAGCCATTGGGACAGATTTGGTATAGATTCTGTCTCTACTTCTAGGCTTTCGTTTCTTGGCTAAATCACCGAACGTCTCCAAGCTTAGGTCTGCTTAGGTGTGAATTGGGAGCAGTGGCAACCCCAGTCTCATGCTAAAAGGATATTTTGATGAGAGAAGATATGTGGAGATCTGACCCCAAGGCCTGAAGTGGATGGAATACTTGGTTTAGTATCAGAAAGCAGAAACAGAAAGCATCGCCAGTGCTTTCGAATGTTGGGAAAATGTTGAACTTGAACAATACCAGCGACATGGACCTCTAAGGGCTGGCTCAGTGGTTAAGAGCTCGCTGGCCGACTTGTCAGAGGACTTGGGGTTTGTTCTCAGAATCACATGTTGATTCATAATCATCCTGTTACAAGGGATCTTATACCTTCTTCTGGCCTCTTTGAGCACCAGGCATGCATGTGGTACATAGACATGCACACAGGAACACACACACACATTTTTTAAAAAGAAGGACGTCAGAAATTATTCACATGAATAGAACTCAATACATATATTAGCCTCATAGCTTATAAAAAATAACAAACCCATGACTAAGATGTGAAGTAATGGCACATCCCTTTTAATCCCAGCACTTGGGAGATCTCTGACAGATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGATCAAGTTCTAGGATAGCCAGCGCTACACCAAGAAACACTGTCTTGAAAAGCAAACAAACAATGTAAAAGCAAGACAACAATAACAATAAACCCCAAAAGAGATAAAAAGAAAAGAAAATCCCATGGCTAATTTTGGCACTGGTACATTCCAAGGCAGCCCACTGGATAACTCACAAATGTCAATGAGATTTTCCACAAGTATCATGACAAACAACCATACTGAGTCAGCACACTCGTCCTGTCCAGAGGTCTCATGCCCTACGATGCTCCCTGCTCCCTAAATTTCCCTTCCACACCCCTACTTGGCTCAGTGATGCACATCTTTGATTAAAGTTCGGCTTCTCTCTGGGGAGTACTTCCTAGGAAACCTGATCACATCACTCATTCCATCCAAGTCTTATGCATGGCAGTGAGCCAGATATCACCCCTTTGCCCTTTTAACTCCGTTCTTCCACAGAACTTTAGTTACACTGACATTTGGAGAGAATGTTGAGCATTGCGGCGAGCTGTGTGCAAGTTTTATTTAGGCTCCTGCCAGGTTTTCTTAAAGGAGAGATATTTCCGAAGCCTGAATCTTCCCAAATAACATGAATTTAGACCCAAAATAGAACAATCCTACCTTAGGGTTGGACTAAATTTTGAGTTTTCAAAGCATGGTCATCTATATTTAGTTTCTTTGATTTTTTTTCATGAAAATCTAAGTTCAGAGGGAACCTATTTTTAAGGGTTCCTTGTAGGTGGTTTGTGCCTCTTTAGAAAAGGATTTGTTGCTGGGTGCTTGGAGGAGGGAAATGAGATTTTAGTTTATTTATAAAAAGAAAACTAAAAATGAGATAGTGATATTTCTAAGCATACACGGAATGGCATTTTACTACTCCGGTCAGTCAGTCCTTCCTCTCCTACCATAGCATCTGTGCAATCATGGCCTCTATGTTTATGGAAGTCTGCTGGTTGGCCCCTAAAAAGACGGATAATCGGGCACTGGAAATCAGAGCTGTTGCTGATAACACAGATCATGGTCAGTTAGGTCCAGAACTTCAAACTCCCAAAAGGCAGAAAGCCCATTCTCTTCTCAGTACAGTCAGTCCCTCATGTGCTGGGGCTGTGACCCTCAGAGATGGTTTGCACTGTCAGCAAAGAGCACTACAGGACACACTTCTAATCTGCTGATCAGCAGTTTAATCAGGAATTTCATCTGGACCGTACTCATTAAGAACTTCAAACTGGGTTTCTGGTGGGGAATGAGAGCCCTGTACATTCCAAGCAAGCTTATGAAGTGCCAAATCCTGTTGGTTTCTATAAATGTACTATGAACCTAGTACACGTGTGACCAGTTCTTTATGCTTGGAGAGAAACAATCACCCCACCACACACACACACACACACACACACACACACACATACACACACACATACACACGCACACACTGATCAGTATTTTATAACAGAGCCTCTCAGATAGAATAGAGGGGCCAAATCCGGCATAACCAACAGAAAAGAAATCTCACACAGGTGAGATAACAGTTAAGACAATAGGCTGGAGAGCTGGCTCAGTGGATAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCTACAACCACATGATGGCTCACAACCATCTGTAATAGGATCTGATACCCACTTCTGGTGTGTCTGAAGACAGTGACAGTGTACCGATGTACATAAAATAAGTAAAGAAAAAAAGAAAGACACTGGACTTTAGGAAACTCCTGGGAGATAGAGAAAAGGAGGTGAGTAGCAGAGTCTCTGCTTTCCTCACCTAAGATTCTATGTGGCGTGAGAGAATTTTAGGTGAGCCTCATGAGTTCTCAGAGATGAGGAACGAGCTCTGAAGGCACAGGGAGACAAGGAGCTAAGGTTCATAGGATAGGGGCGAGAGCTGCACAGAGAGAACTCCAGAGATCTGTAGATGCTCTCCCAGCTACGCTGGTGAGTGAGTGCATGCGTGCTTGTGTCCACCCACATGAGCGCACTCTCACAGAGGAGGACACTTGGTGACCTGCTCAACACCTGCTCAAACACTCTTTGCCTGACTTCTTTCAGGATCTCTCAGGGATGGAGCCAGGGTGGCAGCCAGTGAGCCCCAGAAACCTCCTGTCTCTGCACCCCTCAGTGCTGGGGTTACAGGTGCAGTCACAGCCAACCTTTTACCTGGGTGCCGGCACAGCAGGAGCCTTTACCCACTGAGCCTCTTCTCCAGTGCTCAAGTAACATCTGTAGAGAGGAAGACTATCATGTTAGGGGGAACAGTGCACTAGCGAGGAGGTTAAGGGCAGACAGCCTCGATCTGACAACTGGAAAAAATAGCAGGCCACTTGAAACTATAGCAATGGAAATTTCTCAAGTGAAAAAAGTTCAATAATTAGAATAAAAAAATCAGTGAGTCTCCATATTCTCTTAATATCTGAGAGAGAGAGAGAGAGAGAGGAAGAGAGAGAGAGAGAGAATGAGAGAATAAGCGCACGGTAAAGCAACATTATCAGCTAAAGTAAACTATTTGGCACTTCCAGAACATTCCACCCAGGAGCAAAGTGTACATTCTTTTGTAATGCTCATGAAATACTTGCCAAAATAGACCACTGTTGTGTTCATGCATTGGGACAATGTTTGAGAATGTTAAAGGATTCAAGTCATAGCAAGAATATTTTCTGACCCAAATAGAACTAAAGTCAAAATAATTAGCAGAAGGATCTTTGAAATATCCCCAAACCTTTAGAAAATAAATAAAACACTAAAACAATCCATGGCTGAAACAGAGATCAATAAAGAAATCAGAAAGGATTTTGGGAGAAATACAAATGAAACAGACATTCCAGATCTTCCAAGACCCCACTAGAGCATAGAGAATTTTAATATCAAATGCTTATACTGGTGAAAAAACAAAAACAAGAACATGAATAACTTCCAATCAGTCACCTCAATTTCCCTTTTAAGAAGCCAGAAACAGAAAGACAAGCAACCCCAGAGTGGGCAGAAGAAAGCAATAACATTTAAGGACCCAATGAACAAAAAAAAAAGATAAAAGTCAATAAAGCCAAGAGTCAGATCTCTGAGATCAATTAAAACTGATAAAGCTATAGAATCAGACTCTCCAGAAAAGGTAGACACAAATAACCGGTGTTAGCAGAGAGAGGAGGCATCTTCTGTGTTCTACAGCTTTCAAAAGGGTTACAGAACATAATGAGCCACTTTTACATATAAATTAGACACAGTGTCTGACAATATGAAAGTCACCACAAGAAGAAATAAGCTAACTAGCTTGTCAGAATGATTTGATTTGTACTCGAAGTTTTCCCATGATTTTACCACAAATTCAACAAACCTCCTAAGAAATGATGAATATCAATTCTTTCTAAAAATATTTCTTTGAGACAGGGTTTCTTTGTGTAGCTCTGGCTGTCCTAGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCTGAATGCCAGGATAAAAGGCATGAGCCATTACTGCCTGGCCATGAATATCAATTCTATATAAACTTTTCTAGGGAATTGAAGAGGAAAGACTATTTACCAACTCATTCTTTGAAGTCATTTTAACACCAAAAACCAGGCAAAGAAATTACATGAAAGGAAAACTATATACAACCATTGCATTGTTTTAAGTTAGATTTATTTATTTGTGTATATGGGTATTTTATCTACACGTATATATGTGTACAATATATCTGCCTGGTACCCGTGGAAGTCAGAAGAGGGTATTAGATTCTTTGGAACTGGAGTTACTGATGGCTGTGAGCTACCCTTTGGGTGCTTGGAACTGAACCTGGATCCTCTACAAGAGCAACATGAGCTCTTAACTACTGAACAATTTCTTAAACCAATGGATTTTTTTTTTTTTTGAGACAGGATCTCACTATATAGCTTTGGCCTGGGACTCACTTCATAGGCTAGACTGACCTTGAACTTACAGAGATCTGCCTGTCTCCTGAGTTCTGGGATTAAAAGAGTATACTACCATACCTGGTCTAGACCACCACTCCTAGTTAATATAGATTCAAAAATTACTCTAAAAAGGGATTAGCAAGTCAAATCCGAGAATAGACAAAAGGGCAGTGTGGATTTGCCCCAGGTTCATTTGAACATTCAAAAACCTGTCTAATAAAACATTTCCAATATTAATAAAAATCATTTGTACTAATTGTGTGTTTGTTGCATCCTATCTTGATACTAACTTCTATAGTATTAATCTAGTATTGTTGGTTCATTTACTGTTTGGAGACTAAATAGAACACTAAATGTGAGACCTTCTACTACAGGTTGAGCAGAAATAGAAATCAATACGTCTTTCCCCAGTTAGAAAGCTACTGATTATTCTAGTGTGCTTACAAACACACTTCTTTCAGAGAGAGAAAGGACACTGGCCATTTACTTCTTGTCTTACAGAGCTGATGATTCCCCCATTTCCCCATCTGGCTGCCTCTCCCAGGAGTGTAGAAAGCATTCACAATCCTGTAGATTTAAAGCAATATCACTGGGAGTGATGGTCTGCAACAGAGTAGCTTGCATCTGAATATAAACTGAGAAGGATGGAGAGATGGCCCAGTGGAAAGGGAGCCTTCCTTGAAGGTTAGGGCCCAGCACTCATGTAAAAGCTGCACATGTCAGTACTCAGCTGTAACACCAGGGCTGGGGTATGGGTCGGGGGGGAAGTAGGGCATGGAGACAGGTGGGTCCCAGAGCTCTTGAGCCAGGCAGTCCATCTAGCTTCAAAAGCAAGGGCTGGGTTCAATGAGAAACCCTGTCTCAAAAAGGGAATGGGAAGAGTGATTAAGGAAGACACTCAGTTACAACGTCTAGCCTCTTCACATGCATGCCCGTAGCAAGTACAGTTGTACACACACACACACACACACACACACACACACACACACACACACACAGGCAAGTGTGTAAATTGGGGTATTGATTTCTTCTCTGAGAATGCTTTGTGGAAAGAATTTAATGTTAACTGATTTAGCCAATGCTTACTGATACCATTTGCCCTCCCTCCTGATGTGAGTTCCTTGTCTCGTCATGGGCTGATAGCCACCACTCACAGTACCCAAGTCTTAAAGATTGTCATATCTTACAATCAGCAAGGTTCTAAAGTCAGTACTGACTTACACCTGCCCCATGATGTTGCTTTATGGATGTTGCTTTTACCTACCATATATGCCAGCACATGAGTTGTAACTTTGACATCTGTACTTTCTCATGTGTTTACTCCTCGTAATTAAATAGTCAGTAGATGTGATTGCATGCCGCAGGATTTGTAACCACGAGGAAGAGCTAAAATTAGGCATATATTTCTCTTCTTACATTGAGATGTTTTGGAGTCAAATCAGTCATTTCAGAAAAACCTGAAGTTGGTAGCAAGTAGGTTTCTTATGTGGCACCATGTGTCAAATGGAAATAATTCTGCACCAAGTGAAGGCAGATTTGAAGAATGTATTTCAGGACAAGTACTGAGATTAATTAGTGATGCCTGCTAACATATTGATTAGTGGTGTCTGTCATGGTATGGGAATGAAGAGTAGGAGCATCCCATGGCATGTGTTTACACTCATGTCTTAGAGTTTCAAGTTAACCCTTTCACCACTAGTGACTAAAGTTATTCTGTTGCAG
Seq C2 exon
AACATGAAAGTCATGGCAGAGAAGAACTGGGTCTTGCTCATGAGCCTGGGGATGCTTCTCTTCAAGAATATTACATGGACGTGGCTTTCCTCATAGATGCTTCTCAACGAGTAGGAGGACGTAACGAGTTTAAGGAAGTGAGAACTTTGATAACGTCAGTACTGGATTACTTTCACATTGCCCCAGCTCCACTGACCTCTGTCTTAGGAGACAGAGTGGCTGTCCTGACCTACTCTCCCCCAGGCTATCTGCCAAACACTGAAGAGTGCCCAGTCTACCTGGAATTCGATTTGGTCACTTACAACACTGTACATCAAATGAAGCATCATCTCCAAGAGTCTCTTCAGCAGCTCAATGGTGATGTTTTTATTGGGCATGCCCTTCAGTGGACAGTTGACAATGTCTTTGTAGGAACCCCCAATCTGAGGAAAAACAAAGTTATCTTTATAGTAACTGCAGGTGAAACCAACCCTTTAGACAAAGAAGTTTTAAGGAATGCATCTCTGAGAGCCAAGTGCCAAGGCTACTCCATATTTGTATTTTCCTTTGGTCCGATACACAATGACATGGAGTTAGAAGAATTAGCAAGCCACCCTCTGGATCATCACTTAGTCCGGCTTGGCCGGGTACACAGGCCAGATTTGGACTATGTCATCAAGTTCATCAAGCCATTTGTTCATTCGATCAGAC
VastDB Features
Vast-tools module Information
Secondary ID
-Gm7455:NM_001167923:37
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: