Special

ENSG00000172752 @ hg38

Biotype
protein_coding
Gene Symbol
COL6A5
Description
collagen type VI alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:26674]
Coordinates
chr3:130345516-130484844:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
42.35
61.47
0
Alternative 5'ss
48
chr3:130449940-130449987
+
55.36
61.47
0
Exon Skipping
95
chr3:130373611-130373705
+
96.83
12.7
0
Exon Skipping
561
chr3:130384804-130385364
+
96.52
11.71
0
Exon Skipping
245
chr3:130471682-130471926
+
89.03
43.01
0
Exon Skipping
103
chr3:130477037-130477139
+
13.12
40.74
0
Exon Skipping
212
chr3:130455455-130455666
+
97.49
40.12
0
Exon Skipping
63
chr3:130416757-130416819
+
93.83
30
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000091345 Col6a5 1-to-1
Mouse mm9 ENSMUSG00000091345 AC119951.1 1-to-1
Rat rn6 ENSRNOG00000010663 Col6a5 1-to-1
Chicken galGal3 ENSGALG00000011567 2-to-1
Zebrafish danRer10 ENSDARG00000079752 col6a6 2-to-1
Fruitfly dm6 FBgn0035798 frac 10-to-1