Special

ENSMUSG00000091345 @ mm10

Biotype
protein_coding
Gene Symbol
Col6a5
Description
collagen, type VI, alpha 5 [Source:MGI Symbol;Acc:MGI:3648134]
Coordinates
chr9:105856078-105960643:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
54
chr9:105914994-105915047
-
91.7
72.68
0
Exon Skipping
12
chr9:105890366-105890377
-
97.7
11.92
0
Exon Skipping
45
chr9:105915139-105915183
-
97.8
27.77
0
Intron Retention
2476
chr9:105912518-105914993
-
7.69
27.08
0
Intron Retention
396
chr9:105910700-105911095
-
17.67
59.6
0
Intron Retention
3484
chr9:105907162-105910645
-
14.37
34.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000172752 COL6A5 1-to-1
Human hg19 ENSG00000172752 COL29A1 1-to-1
Rat rn6 ENSRNOG00000010663 Col6a5 1-to-1
Chicken galGal3 ENSGALG00000011567 2-to-1
Fruitfly dm6 FBgn0035798 frac 11-to-1