MmuINT0132965 @ mm9
Intron Retention
Gene
ENSMUSG00000039607 | Rbms3
Description
RNA binding motif, single stranded interacting protein [Source:MGI Symbol;Acc:MGI:2444477]
Coordinates
chr9:116590249-116604984:-
Coord C1 exon
chr9:116604938-116604984
Coord A exon
chr9:116590346-116604937
Coord C2 exon
chr9:116590249-116590345
Length
14592 bp
Sequences
Splice sites
5' ss Seq
CGGGTAAGT
5' ss Score
10.75
3' ss Seq
TTGTTGTTTTCTGTTCACAGATT
3' ss Score
10.78
Exon sequences
Seq C1 exon
GCTGGCATGGCTCTGACCTATGACCCCACAGCTGCCCTACAGAACGG
Seq A exon
GTAAGTAGACCCCATTTTCTCAGTTTTTATTTTTTTTCTAAGTAGTCTATGGCCTCTAAATCCCCACCAAAGAAAGTGGCCATTGTACTGGCTGGTTTTGTGTGTCAACTTGACACAAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGGTGAGGAAATGACTCCATGAGATCCAACCATAAGGCATTTTCTCAATTAGTGATCAAGGGTGGGAGGGCCCATTGAGAATGGTGCCATCCTTGGGCTGGTAGTGTTGGGTTCTACAAGAAAGAAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTAATGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGCCCTGTGTGAGTTCCAGTCCTGACTTCTTTGGTAATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTTCTCCCCAACTTGCTTCTTGATCATGATGTTTGTGCGGGAATAGAAGCCCTGACTAAGACAGCCATATATATAGTTTTCTTTTGTGGATGCTCTCTTAGCAAGACATTTCCCACTATTGGTTCCTTCTCCTTAGAAGTTCCCACAGTTCTAAGCCTTCCCTTAGCTCATCTCTTCTAGTCTGCTGATATCTCCAAACTGGAATGCAAGGAAGGCCAGGTGTGGAGGGAGCATTGGCATGGCTGAAGGTAGTCACCCATGTCTCTAGGACTTAGTTGCCCAGATGTCTCCTTTGAGGTCAACTTTGAATGGTGCACAGTATTTGACCAGATGCACTTCTGCAATGGACTTAGTTCATGGTCAGTCTTGTTCAGCTAATTGTATCTTTGTTCTTCATTTTAATCTGTCTGGAAATATGTAGCCTCTTATTTAGCTTTGAATTCTGCCTCCAAAAACCAAGACTTACTGTTAAGCCGCATGCTGTGGACTCTCTAAAACTGTCCTGTAGTCGGATTACTCTTCTGTTTCTCTGCTTCCCTTTGCTTGGCTTTGGGTGAATTTTGCCATTGGCCCTGAGCATTTGCTAGCTCTCTGTTTTCCTTCCAGAATTAAGGTAGGATCAGTGACCTTGAACTTTCTGGTTTTTATTTACAGAGTTCTTGCTATTAGAAATGGGAAAAAAGATAATTTTTTATAGTTAATTTTTTATAGTTAATTTATAGTTAATTAGTAGTTTAAGCACAGTTGTGATCATTGATGTTTAGATCAATAACTATTTTGCTAAGCCACATAGGAGTGAAATCTATATGTCATACTGGCTTACTCATAAACTGTTAAATGCATAGCTTCAAAATTATAGGTGTCATCTGCACAACGACATGGCCATCATCCCCAGGTGGCATTGGTATTAACTTCAAAATAGTGTGTTCTCTCTGACTTTCCCTCTTGCTCAGTTGTTCACAAAGCTATTGTAGAGTGCTTTGACACTAGAGCACATCCCCGAGCTTACACCTGAACAGCAGACATGGTTTATTTCAAGTCCTGTGCTGTGCCATTGGGATGAGGGCAAACATTCCCATTTTTCAAACCATAAATCATTATATCTGCCATAGGTGGAAAAGATAATCAAATACCATGTTTAACTCTGAGGAGAGCCTGACATCTCAAGTCCATCTGGGTCATTAAGAAAGACAGCATTGACAGGCATGGTAGCACACACCTTAAATCCCAGTACTTGGGAGACAAAGGCAGGCAAATCTGGGTTCAAGGCCAGTTTGGTCTACAGAGTGAGTTTCAGGACAGCTGAGGCTACAGGGAGAAACCCTATCCAGGAAGATTAAGAGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAGGGATAGAGGGAGGGAAGGAGGAAGGGAGACAGAGACACAGACACAGAGAGAGAGCAGCCATTGTGAGTACCATGGGATTTGGTGTGGCATTTGGGGGTGCTGACTTAGCTCATTAAAACAATGGGCATCAGGCAGACACGTTCTAAGGATATGAGCTTTCTGAGCAGAGGGGTCTGTAGAGTTGACTACCAACCATTTACAAGAGTAGAAATTTCTCCTGAGGGAACTGTGCCGGTACAGAAAGTTATGCTGGAGTGAATTTGAAAGTTTAAAATTTGCCTCTTCATTATGGTGTGGCATAAATAATGAAGAAGTCCTTGAAGCAGGAAGATCTTAGAAATGGGGGAAATCACTGAAGAGAGATTAAAATAGCCTAAGGCTGGAGAGAGAGCTCAGTCAGTTAATGCTTGCCTTGTTAGCATGGGGACCAGAACCTACAGTGAGGAAATGCTGGGCAAAGTGGCTCGGAACTGAAACCTCAGCCCTGGGGAAGTAGACTCAGAGAGATCTCTGGGGCCAAGTGGCCAACCAGCATACCTGGCATCTTCCAGACCACTGAGAGACACTGTTGTAAAAAACCAAGGTGGACAGAGTCCTGAGGAATGACAGATGAGGTTTACCTCTGACCCTCACAGGCCTGCAAGCCAACCTGCATACAAGTATGAATCAGCATTCACAGCACACACACACACACACACACACACACACACACACACACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATTAAAATGATCCAGTTAGAAGACCACAAGAGTTTGTTCTAAGAAGCTTGATGTATTAATGGAAGAGGGAACAGAGGAGAGGACGTCACAAGGGACTGTCCATCTAGCAAGGTAACACAGTGAGGAGCCAGGCCCTGTTTCTGCTGCTCTCTATTGTACTGAAAGAAACTGAGACAAGACCCTTGCCTTGAGCCCGGAACCTTCTCCGGATGCCTGCTCTTCCCCAGCTTTAGTTTTTCCTCAGAGTTTGTTTGTTTTTTGTTTTTATTTTTCACATTGTCCCCTTCTTCCAATGAGCCCCGGCCATCTCACATTCCTCTGAATCTCAAGCCTTTACATTCTGTATCTAAGGCCGTGGCTTGCAGTGGCTCTGTGGTTTGTGTTTGCCACTGCTTCTCAGAGATCATCACCAAGAATCATCCTGTTTCCTAATGAGGCAGACAAACCTATGTGTTTCTCATGTCTTGAGTTAATGGGATTTATGGGGCCAGGAGATGGCTCACGGGCTAAGACACTTTCTGCACAGGTCTGATAGCCCAAGACAGTTGAGCTAATTTCAAATTCTGGAGCATAAATAAGATGTTGGAACCCATGTACAAAGACAGATGCATCAACATACTTCTGTCATCCTGCATGTCTATGGTGAGATGGGAGATGGCCACAGGAGAATAAACTCAAAGCCTGTAGTTGGATAGCCTGCAGTATGCAAGAGCAAAGACAGTCTCTCAACAAGGTGAAAAGTGGGAAGCAACTCCTGACAGTGGTTCTCTGAACTAGACACACACACACATGCATGCACAGGCACACACATACACACATGCATACACAAATACACACTCAGTCACACAATACATACATATACGTGCAAATACACACACATGAGCACACAAACACACACACAGAGCAGAATGTATTAGCCTGTCATCCACTGTAGTGTTCTTTACAAGAAAAAAAGGAGTTTTATATGCTGCTGTGGAGTTGAAAGAAGTACAATGATTGTCCTTACTTTTAAATGCTTTTGTTGCCTTTGGTTTTATTGGGGCCTATGGCAACTATAATTGGAAGTCACTGGTAGAACAGCCATTTCTATAAGTATAATGCCAAAATGTCTTCACATATTTTCTCAGCAAAGGGCCCCTCAGGTAAATATCATCTCCTCTAAGGGGCACAGACCCTGTTAGATTACCTGCTCATCAGTCTAGAGAATCTGTGTAAATTCCAGAATTGAGACATGTTCCATCAGGTGGGAAGAACCTAACGAAGAGGAGCATTCACTGCTATAAGGAAGAAGCTATCCCTACCGCATGACTCCATCACAGGCTGGATCCAAAGACAGAGGCACAAATCGCTCCATTCCCCTTAGAGACTGCAGAATACTACTTACTGCTCAGCTAGACGAGTTCAACAGCAGCCCTCTCTGTTTGGATTTAAAGGCTCTTCCTATTCATAAAATCATTTGGTGCCACAACTGAGAACGAAAATTTCACTTCATCTTGACTCCAATAAACATATAGAGTCACAATTCTAATAGGAGATAAAATAAAAAACACTGTAGCAATAGATGCATAAGTACTAAAAATATGCTTCTATTCAGTGTTTAAAAGACTTGTTTTAGTTTTAATTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACATGCTCACATGAGTATGGTGCCCACTGAGTCTAAAAGAGGGGACTGATCCTCAGGAGCTGGAGTTGCAGGAGATGGAGAGCCACTGAAGATGGGTGCTGGGACTCACATCAGGACCTCTGCAGGAGCAAGAAGCATCCTTACATGGCCAGCCATTTCTTCAGCCCAGCATTCACTTGTATAAGTACAAAATACCAGAAGAGTAGCACACAAACGATGGAATTTACTCTCTGGGAAGACTCAGAAGTGCTTCAGGAAATAAGTGAGGAAGGGTACTTTAGTTTTTACCATTTACCTGATTCTATGTATTATTTTCAAAGATGAAAATGGATTGCATCCGATCATACAGGAGAAGTTGTGCTCTGAGGAGGGCTTCCAAGCTCTCTGATGCACCAGCAGGAGCTGTTCTCTCGCCAAGGCCTCCACATTGTAGTAAAGAGTGTGTTTGGTGGTCCTCTGGTGTCTGGTAACCAAACTCTAAGTCAAAGGGTTTTCTGAGTATAATATGGAGCTGGATTCTTGAGTTTCTCTCAATGCTAGGACTAAATTCCTAAAAAGAAGCAGTTTAAGGATAGGTGGAGAATTTGTTTTGCCTCACATGGTTTGAAGGGGCAATCCATTATGTAGAGAAGGCAGCACAGTGGGGGTGATCAGAGAGGATTTTGACTGTGGAGGCCAGAGAATGCGGGTGCTTGGTCACATCTACTAGGATCAGGGAGCAAGAAACAGCCTGGAAGCAGAAACAGAAACATGCCATATCCTTCCTGAAAACCACTTCCTGGATTCAGAATCCTCTCAAAATACGAGCATCAGCTGGAAAGATGAATGTTTAACTCCATGGGTCCAGGGGGAATAGCACTCCACATTCAAACCACAACAGGGACGTTACAGTCACGAATCACGGCATCTGTGGTTGCTTCCACAACATGAACTCAGGATCAAGCCATTCAACCTTCTAGCCTGGAGGAAGGAAGGGCTCGTGAAGCCCCAACCCCATCTGAGTGAATCCATGTCTGCTGAGGAGGGGACTCTGTTTCCTTCAAAGATGTTGCCCCTGGTGGATTGCCCATGTACCACCAGATGGTCGCACACCCATACACATACAAGCAGTACTTCTCAGTAAGTTGTAAAATAAAAAGAATAAATAATATAAACATAATAAATAATAAAAAGAGGACATGAAGTTGCAGGGGAGTTGGGGAAGAGTTGAAACAGGAGAAGTGAGGGCTGGATATGATCTTTAATATAGTATCAAAGAATAAAAAAAAATCAAATGAGTAGAGTCCCATAACTGCCACATTATCACTGCATTGTGAAACTAGAACAGAGACTTTGTTTAGCGTATGTGCTAGTGTGCCAGCAATATAACTCTATCATAGTAAGACTTTGGTATTGGTAGTCACTGGGGAATAACAATTCCACCTGTCTGTATCCATCCAAGTTACCACTTGAAATTAGTTCAGTCTCACCTTTACCTAAGAGTTGGAGGTTAGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCTAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAGCCATCTGTAATGAGATCTGATGCCCTGTTCTGGTGTGTCTGAAGACAGCGACAGTGTACACTATAAATAAAATAAATCTTAAAAAAAAAAGTTGGAGGTTAAAGGGTCAAAGTCATAACTGGGAAGGGAAACCTGTATATATATGTTTTTTTTTTTTACCATATATCAGCTTAGCAAAATAAAACTGTCCATTCCCCTCCACTGGCTGAGCACAACTCTGTTACAGTTTGTTATCACTGTCTCCTGTTGTTTTTATCTTCCTAGCAGTCCACTATAAAATCCCATCACTTTCAAATATGACTTGGAGGAAATGAGAAACAAGCCTTCCCACATTCCCAGGGCTTCTTCTCCGGGCCCCTCTCCCCCACGATGTGTTGTATAATGTCCCTCAGAGGTTTTATTGGAGTCCAATGTATTCCTGTGAGAGGCGACAAGGGAATGTCTCCCGTGGTGTTCTCTGCCAGCTGTTTTCTATGGGCATTTGATACTAAGTGATACAGAAACATCACACTATTGCTCTGAGAAGGAAATGACTGGAAAGCTGTGTTAGTGTTACAGCAGTATATTGTTACTACTTTATACATAAATATGGTGATATTAGAGTAAAAATGACCAGAAATGTATTAATCTTATCCTATTGGTTAGCCTGAGTATTCATGGTTCCAACTCTAATAATATTGCCCGTGGACATAAAACACAAGCTCTTACTGTCTGTTTTGGTGTGCAAATAGGATTTTGTATGTTTTCTTTATGGTAAAAACATCCCACCCTGGGGTTATTGAGATGTCTGTGTTATTTTTATTGCCAGTGAAATAAGATTTTACTATATTACTGCTGACTGAAAATCCCCCTGAGATGACTTTTCTTTAGGCAAACCGATATCCCATTAGTGACCCTATACTCTCATTTCCCTGGGCTTAGGAAAGATACTTGCCTTTAATGCCAGAAAACTCAGGAACTGCTGTGTTCCTTAAAAAGCACACATGTGAGGCTGGGGAGGTGGCTCAGTGGGCAGAGCCTGCAGGGCCTGAGTGAGATTCCACCACCCACAGGAAGCAGATGCTATAATCCGAGTCTCTAATCCCAGCATTCCTGTGGGAAGTTGGGAGGTGTGGACAGGAGAATTGCTGGGGTTCACCGAATTGCTTGGGCTATCCTGGTGTAGGCAGCAGCAAAATGAGAAACGTATCTCACAAGCACAGTGGGAAGTGAAAACCAACATCTGAGTCTGTCCTCCAACCTCCATAAAAGTCGAGTGGTGTGTAAGCACCCCAGTGTACACCATACACAAAGATGAACGGGTTTTCAATGGGTATCTGGTTTACTCTTAGTTCTTCATCATTTGGGGTTTAGGTTACAGGAAACCTCATCTGTAGGTCCACACCAGGCTACTTGGTGTGTCAGCTTGACTAGCAGTTCAGGCTGGATGACTTGTGGTTGTATATTCCGCTATGCAGTGCAGAGCAATCTGTAGTATCTCAAAACTTTCCAGTGGATGTCAGCCGCCTCCGGTTGTCTCTAGACATTGTCAAAGGAAGAAAGACCTGCATCCAACTTAGAACACCCAGTTAGATGTCCAATGAAGGCTTTTTGTGAGGTAGAAATCATGGCCCCAAATATATACGTGTGTACATATGTGTGTGCATCTGTGTGTCTGTGTTTGTGTGTATGCGTGTCTTTGTTTGTGTGTGAGTATGCATACCCATTTGGCTTTCTGTGTCTCTATGTATGTATATATGTTGTATGCTTGTATGTGTCTGTGTATCTGTGTGTGGGCTTGTGTGTGAGTATGTATTTTGGTGTCTGTCTGTATGTCTGTCTGTATATATGTGTCTATATGTCTGTGTGTGTGCTTATGTGTGAGTGTGTGTGTATCAGAGTTTGTGTTTCTGTGACTGTGTAACATGAATACCTTCCAGAGCATCCATATGACTCAAAGCCATCTGTAACTCCAATTGCAAGGGATCTGATACCCTCTTCTGGCCCCTCAGTCACTATATGCATGTGGCACACATTGATGCAGGCAAATACTTAGACACATAGAATGAACAAAAATCTAAAAAAAAAAAATCACTAAGCATTAAAAACAAAGATCTTAAGAGAGTAAACTATTTTTGGTTGAACAGTTTGTCCAGGAATCTGTTCCCAGCACTTTATAGCAAGACTTACCAGCCATGATATGTGCATTCCCACTTAGAAATTACAAAGGCATGTATGTTCATGGAGTGCCTCTGTAGCATGTACTTTCTACTACTCCACTTTAAACTCCAAGCAGACCTCTCTACCAGCTACCTCCCTGGTTCCCTTGGATCTGCAAATGAAAGACACACACACACACACACACACATACACACACACACACACATGTTAATTTTTAATATGCTTTTTAGCTCAATGGCCGAGCACTTCTAAGCCTCCCCAGGCTAAAGTGCCCTTATTCACTCCCAGCTCAACGCCTCTAAATCTTCTCTCAGCTTAGCTGCCAGGTTACCTTCTCCTTGATCCATACCCTAAATCTGCCCTCATCTTAGTTACATTTCTAATCTCCTGCCTGCTACCCCAGGCCACTCCACCCAAGATCTCACATGGCTCTCTCTTCCTCCAAAGCATGGTGAATCTTTTTTCCTCCTCCTGTGTCTCCAAGCCTGCCTGCAGGAACCTGGAAGCCCCACCTCTTCTGACTAGCTGTTGGCCGCTAGCATCTTTATTGATTGATCAAGAACCAATTGGGAAACAGGACCTTCAGCCTTCCCGTGCAGATTCCCTGTTCAAGCAACAGAACCACCCCCTGCATGCCTCTATGATGGCTACAAGTTGGGTTGATTTTCTATTAGTTGTTCCCTGTGAGGCATTTATCTGGATTTATTTAGATAGATGCCAATATGAAAGGCCTGGGACTTGTTTCTATGGTATGTACATGTTTGTCCAGGTGTATGTGGACAAGCACATGCGTATGTGTGTTCACATGCCTGCATATGTGAATGTGTATATATGATATGTCTCTATGTGGTATGATGTATGTGTATGCATATGTATATGCATGTGTATATGATGTGTGTATGTACATGTACATTCACATTTAGGCCAGAGTTTAACCTCAGGTGTCATTCCCTGGAGATACTCACCATAGTTTATGAGATAGGCTCTCTCATTGGCCAGACTCTCACCAAGTAGTGTAGGCTCAGTGAGCCCCACCTAGCCATCTTCCTATCTCCACTACTCAGGGATTACAATGGTACATTCACAACCACACCTGGATTTTCTTAAGTGTGCTCTAGGAATTAAACCTAAGTTTTATGTTTGTCCTTTACTGACTGAGCTGTCTCCTCAATCAGACATTGTCTGTAAAGTATGTATGGACACATGGCAGGGGCTCAGATGTGCTGCGGTTCTTCCTTCAGACTCATATTTCTCCTTTGGGCACAGCCCTCCTAAGCCTCAGCTGCCACAGTGGCCTCTCCTGGAGTGGCCTAAAAGAGTGGCCTTGCAGCAGGATCAGAGTTAGATTAAGATTTGGGGCTCTGCCCGCTCTTCCCACTGAGTTTTCTGTTCTGGGTATCGCTGACTTGAATGGCCATTTCAGAATACACTGAGAAGTATGGAATGTCACTCTTATTTGATGGATGGGATTAGAGCAGATAGAACAAAAGCACATTAAATTTCCCCCTGACAGGTTCCTCCTGTGATGTTCTTTTACTTGGTTGGTTAATTTCTATTTCTGTTCTCTGCATTCTCCACAGAATAACTTTGCAAACTCTGTCAATACAAATTGTATTGCTTTTATTCTAAATATTCCAATTGGAACACTTTACAAAATAGACTGTCCATGCTAAAATGCAGCACATGGTTTTTCTGTCAGTGTAAGGGTAAGAGGGGGCTTGTTCAACAAGCTTTGTCACTGTATGGGGCATGAGACGGACTCTGGGTACCTGGTCATGTCCTTATCAGCCTAGGGCAGGTCTCTCTGCCCACTGCCTCATAAACAAAATTTGTCAAAGACCTAAAAGAGATTATCAAAAGCTAACCAGATCTTCCACAGCAAAGGACTGCCATGCCTAGTTATGAGAGCCCTTCATTCTTAGAAAGCAGACATTATGTGAACTTCCCTTGGACATTTACCAAGATGCAGCTCTGGGCTTTCCTTCTTTGGAATCTCTAGCTCTCTATCATCTACATGGGCCCATTGGGAATGGCCTAACGAACACTAGCATCGACTTTGCATGCACTTATCCCTCAATAAACAATCACTGTATTACTACAATGCCCCAGGCTTCCTCCTACACAGCAAGGTCACTATTGCCTGAATCCACATTGAACTAATAGTCTAAAGAGAAAAATAGTTAAGAAATATGCTGTAGTTTTCAGCTTGGACTTCCATAGGCAAGTCATTATCTTAACTTTTATTGATCTCTTCACAAACTCCAAAGGCTCAGAGTTCAAAATCAAGGACATAATTTACTTTCTGTGAGGATGCCCCCTTCCTGGCTTTTCAATGGCTACCATCCTGTGTATCCTTGGTGGCCCTCCCCCACCGCCCCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGGGTAGAAAATGGGCTCTTAGGTATCTGTTTTTAATTCCCTCTCACCAAGAATCCACCCTTGCTGTGCCCTCTCACTTTAATTGCTTTTTCAGAGGCCTGTCTTCCAATGCATTTGTGCCAGAAGTCAAGATTTCAATGCATGAACCGCAGAGGTGGGAGACACATTCAATCTATAGCAGAGATTTTTTTCTTTTCTTTTTGAGAAATTTTCAGCTGCCTCAGTTATAGAACAAAGAAAAGTAATAAAGGAGAAGGATATATATATATATATATTGCTACACTAGCCACAAGTGCCTTAAAGAATGCACATATGAGAGGGCAAAAAGGTGGGGACTATAGAAGCTATGAAACCATCTGTGTAGACAGAGTCCACACTGTGCTGCTCAGTGGGAAAAGGGACAACAGAATCATTAGGAGGAGAAAGTTCCAGAATCCCAGATGTGTGGTCATCAGGTACAAAAAAGGCATCTGAGAGGCTGGCAGAAGACTGATTGGTTGGTGACTGAATTATGTCCTTGTTGCAATGAGAAGCCCAGGAAGGCTGTTAGGCAGATGAGCCTAAAGTAAGGCATTCTTTGAGGGACAAACAGGAATACTGAGTGACATTTCAGAGTCCTGTCTGAGACACATGGGTACACAGAGTAAGTGTTCAGTAAACCTTTTAAAACATAAAGTAGAGGTCCAGGGAGCTAGCTCCATGTCCAGGAACACACCGGGCTCTCACAGAGGACCTGGACCTGGTTCCCGGCACTCACATCACATCACATGCCTCCCAACCATCTGTAAGTCCAGCTCCAAAGCTCCCTATGCCCTCTTCTGGCCTCTCTGAACACCTGCATGTGCATGATGTACATACAGACAAGTGGGCAGACACACATACACATCTACAAAAATAAAAAGTACAAAGATGGATATTCTGTAGGAACTGTCTTTGTAAGAGTCAGTTTAGAGCAGGTGTTGTGGATCCCTGCCATCCAGCACTTGGTAAGCTGAAGCAGGAGGATTCATACAAGGTTAAGTCCATTCTGTTCTGCATAGTGAGATCCTAGCTCAAAAACAGTGTTTCCTGCATGGCATGATGATGTGCACCTGCAATCCCAGCACTCAGGGGGCTGAGGCTGAGGATTAGCAGTTCAAGGCTAGCCTCAGTTAGTTAGTGGACCAATGGCCAGCTTTAAGTTGAGACCCCCTTTCCAAAGACAATCCTCCAGAGCAAGGACAATTTAGTATGATTCTGAGTATATAAATATATACTTCTATATGTATGATCTATAGATTACACCGTGTATATGTATATATGTGTGTATACATATATACACATATACACGTGCGCGTGTGCGTGTATTTGCCCTTCTGGGGTATAACTTTATAATTGTATCAGGTACATACAGTTCTGAGATCACAGCAATCAAGGTTTGAAGAGCTACACCCACTCCTAAGTCCCCTTAAGCCCCTCTGGAGTAACCCCTTCCCTCATAACTAGACTATCCCAGCCTGTGAGTCATCTCCTGCCTCTACGACTTTGCCTTTTCCACATTGTGATAGAAACAGGATGTGCACCTTGTAGTGTCTTAGGTCCTCTTTCACTTAGCACAACCCCCTTAAGATCTGCCCTGGTGGCTTTAGCATTGGTTATGGTTGGCCTTCCTTTCCATAGATTCCACATTCATGGGTTCCACCAACCACAATACAAAATATTTGAAAAAATGCATCTACATACAGTAATTTTCTTCTTGTCTTTATTCTCCAGAAGATAAGATCTAACTGCTTGTAGGGATTGTACTTGTATTAAAGATTATAAGTAATCTAGAGTTAACTTGTGGTAAACCAGGAGTGCATGCTGTATGTACACACTACACTGTCCTATGCAAGAGAACAGAGGATATCTCTGTTAGGTATCCATGGCTGGGGAGGAGCATGGACAATAAGCCTGGTTGTGTTTTTGGTCTTGTTGCTTTGTGGTGTTCCACTGTATGGATGCAATGCTGTCTTTGGGCAAATTTTAAATACATCTTGTTGTTATCAGTTTCAGGTGAATATGAATAAAAGTTCTGCCCACATTTGCATTAAGGGTTTGTATAAACAAGTTTTCATTTCTCTTTCTTAGGAAGAGCAGGGTTCTGGGACACAGGGTGTGTCGATATCTAAGTTCATAAGAACCTCCAAGCCTTTTTCCTAGACAGCCTTAGCCCTAAGCACTCCCTCCAGCGGGAGAATTTCACTTTCTCTGTATTCTCATCATAACTGACCTGTGTGTGTTTGTTTTCTGTCCTGGTACTTGTATAGCTAGTGTCCCTTTGAGAGCATCAGTCTTAGCTAGAAGAGCCAGTGAGCAGGCGTAGGAAGAACAATGCATTAGTTGGTTTTGTTTTTTGTTTTTCCTATCTATACCTTTTTTTTTTTCTTAATCCAAAGAATTCGGCCTTAAAAAAATCCTTGGTAGGGATTGGAAAGATTATTTAGCAGTGAAGAAAGCTCATGGCTCTTACAGAGGATCTGAGTTTGGTTCCCAGCACAGACATTGGAAGACTTACATCTCTTAACTCCAGTTCTGTGAAAGCCAACGCCCTCTTTTGGCCTCCGCAGGCACTGCACTCACAAGTGCACAAACCCACATATACACATAATGAAACATAAAGAAATATATACTTTTAAAATTCTTGATAAAACCTAAATAAAAAAAGGTTTAACTTAAATAGATGTATAACAAAAACATGCATGTCACTAATCCTTGCTTTGAACCATTAACAACTTGAGTCTTGGCAACCTCAAATCTTATATATGCTCTATCCAGCAGAAGACCATAAAATGCTTCCTTTTAGATAAGCCCTTATGTTTTCAAAGTGACAGTGAATTCTGGGAGTTAATGAATACGTTGTGTTGTTACTTATAAAGGGAGTATCATGGCTGACTCTTGCTATGCAGTTAGCAAAGCAAAACACTTGTTGCTTTCTCCCTGATTTCCCAGCAGGTAGGAGCATGAGTGCACAGACTTTCTATGGTGACCTCGTCTTATCTGTTCCATGGCTACTTTGGTCTTTCATGTCAATGGAGCTATGTGGAGTAAACTGTTTAAAACCCCACTGAAGAGTTAGGTCAGTAGACACCTGGTAGACACTAAGGCCTCTCCCACATGTTGATGATATGCCGTTGGCTTTAACGTCTAGGTATTTCAGTTTTGTAGAAGAAAAGGTTCTTCCCTCGTATTTGTGAGCTCCTGATTTCACCCAGTATTATTTTATAATTGTTCAGTGGGTGTTCTAAAAGGTCAAGGAAATTAAGTGCTACCCACAGTCTCTTGGAGCTTGTCCCATAATCCTGTTACCTACACCACTTCCTTGATCGAATCCAGAAAGTTCTTTTCTCCAATCCAGACTCAAGTCATCCTCTTTCTTTGGAGAAAATACTATCCTCTGAAGGATACTACCACAAAATATTAGAAGAGTGATTTCCGACCTCCCTAAATCTGTGTGTGGCCCTTTAATGCAGTTACTCATGCTACTTCATAACTGTACACTTGCGAGTGTTGCGAGTTGTAATACAAATATCTGATATGTAGGCTATGTGATATGCAACCCCTGTGAAAGAGTTGTTCAATCCTGAGAGGGATCACGAACCAGCAAGTAGAGAACCACTGATGTGTAGACCCTTCTAGGAATGAATTCTTATTTCCTGAAACAGATGCGCTCAATGTGAGCTCTTACCACCTTCCTTTACAAAGCCTGGTGCCTTTTTCTTTTGGAGAATTCTTTTGGAGGACTTTTGCTCAGCACCACCATTTGTAAGGCTTGATACTGCTCTCTACCTGTTAGCTACCAGCACTGTTGTGCCCACAGTTGATTTTGTCAGATGACTTAAAGTTGTCTCTGTATTCACCTGATGTGTCCCTCTGGGAGGAATCAGATATGTATCCCTTGCAGATGGTGCTGTGAACAGTGGGGAACTCTCTTGGTGTTCTTGGCAGGGCTGGATTGCAGGCCGGTCATGCAGCAGCTTCATGAATCTTTTGTTGTTGTTTTCTGTTCACAG
Seq C2 exon
ATTTTATTCTTCACCGTACAGTCTCGCAACCAACCGCATGATCCCACAGACATCTATCACGCCCTTCATTGCCGCTTCCCCTGTCTCCACATACCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000039607-Rbms3:NM_001172126:8
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.219 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: