MmuINT0142972 @ mm10
Intron Retention
Gene
ENSMUSG00000059013 | Sh2d3c
Description
SH2 domain containing 3C [Source:MGI Symbol;Acc:MGI:1351631]
Coordinates
chr2:32724937-32737558:+
Coord C1 exon
chr2:32724937-32725399
Coord A exon
chr2:32725400-32737518
Coord C2 exon
chr2:32737519-32737558
Length
12119 bp
Sequences
Splice sites
5' ss Seq
AAGGTAGGT
5' ss Score
10.29
3' ss Seq
CCTCTTTTTTCTTCTTCCAGGAC
3' ss Score
12.52
Exon sequences
Seq C1 exon
AGTTCTTCAAGTTCAAGGGCCTTGGGAGCCTTTCCAATCTCCCGCGGTCCTTTTCTCTGAGACGGTCTTCAGCCTCTGCTAGTATCCGGTCTTGTCCGGAGCCTGACACCTTTGAAGCCACACAGGATGACATGGTGACACTCCCAAAGAGTCCTCCTGCCTATGCACGTTCTAGTGACATGTACAGCCACATGGGTACCATGCCCCGCCCTAACATCAAGAAGGCTCAGAAACAACAGGCTGTCCAGAAGGCCCAGGAGGTCAGCCGAGAGTCGCACCTGGTTTCTCGAAGGCTGCCAGAGCCACCAGACTTAGAGGCAGCCAAGGAGGCAGGGGAGGGAACTGAAGCCCTACTGGAGGACACGGCACCTTCAGCAGTAGAAGTGGACCCTATGAGGGAACTGGAGGATCTCACAGTAGACACAGAGAAGGAGCAAGTCCCTGGGGATGTGAGCCCAGAAAG
Seq A exon
GTAGGTGCCAACAGGGCACAGACATCTGGACTGAAAAGAAAAGGCTTGGGCTTAGGGAGTGGTACATCCTGTGGGCCCAGTATGGAGGCAGCGGAGGCTGGGGGATTGCTATGAATTTGAGGTCAGCCTAAACTACAAGAATGAAACCCTGTCTCAAAACATAACAGGAAATGAAATACAAAGGAAATGAAGTGAGAGAGGGAGCTAGGTGTGCAGATCAGCTGGCCAAGTGCTTTCCTAGCGCACAGGAAGCCCTGGGTTTGATCCCTGCCTGAATGTGGGTTTCTATTGTTGCAGAGAAACCCCATAACCAAAAAAGCAGCGTGAGGAGGCAAGTGCTTATTTGGTTCACACTTGCACATAGCTGCTCACATCACTAAAGGGAGTCAGGTTGGGGAACTCAAGCAGGGCGGGAACCTGGAGGCAGGAGCTGATGCAGAGGCCATGGAGGAGTGCTGCTTACTGGCTTGCTCTCCATGCCTTGCTCAGCCTGCTTTCTGATAGAACCCAGCACCAACAGAGGCAGGCACCACCCACAATGGACTGTGCCCTCCAATCACTAATTAAGAAAAGCTCCTACAGAGCCGGGTGTGGTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGAGGATTTCTGAGTTCGAGGCTAGCCTGGTCTACAAAGTGAGTTCTATACAGAGAAACCCTGTCTCAAGGAAAAAAAAAAAAAAAAAAAAAAAGGAAAGAAAAGAAAAGCAAAGCTCCTACAGGCTTGCCTACAGCCCCAATGTGTTTTGTTTGTTTTGGGTTTTTGGAGACAGGGTTTGTGTGTGTAGCCCTGGAAGTCCCAGAACTTGGTAGACCAGGCTGGCCTGGAACTCACAGAGTGCCTCCTGCCTCTCCCTCCCTAGTTACTGGGATTAAAGGCCGGCACCACCACTACCTGATCTACAACCAGATTTTATGGAAGCATTTTCATCACTGAGGCTCCCTCCTTTCAGGTGACTTTAGCTTGTGTCACGCTGACATGTCCAGCACCATCTCTGTCACCACATAAGTTGGTGTGGTAGCACTTGAGAGCTGCAAGCCAGAGGATCTGCAGTTCCGGGCGATTCTTGGCTTTATATGACGCTCCAGGCCAGCCTGGAAAACACGAGAGGAAGAATGGGAGAGAGAAATAGGGCAGAAGAAACCCCCAAGAGCTTTCCACAACTAGGCACTCTCTGGAAACATTTGTAACTAATTCTCAAAAGAAACCCAGCTAGAGAAATACTGTTTCTACAGCAGAGAAGGAAGCAGGTTCAGGGAACCGGTTTCATCTGGGCCAGCCAGGCTCAACACCATCCTGTTAGCAACCAAGCTGGGTTTGAACTGCGGCCCACCCAACTCAGCGCCTTTAGTTCTGGGGGCCAACATGACTAATGCATTTTCTTTCTTTCTTTTTTTTTTTTTTTTTAGATTTATTTATTTATTTATTCTATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTCGCTAAGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTCAGAAGAGCAATCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGACTAATGTATTTTCTAGAAAGCCACTTGTAAATAAGGATTTACTTATTGGGTCCTATACATTGAGTTTAGGAAAAGATATAAATAAATAGCGAGCCTGCAAGATGGCTCAGTTGGTAAAGACACATACTGCCAAGTGGTAGAGCAAGCTTGATCCCCAGCGTCCACAAGGTGAAGGGAGAGGGCTGGTATATGGTGGCATGTGCACCTGTCCAATTCCCCCCACACTCCCACAAAAAACCAGCCCCCCAAAACCAAACCACCACCTCCTGGCTTGGGAAATGGTACTTTCATAATTAATACAATTAAGGCTTTCCCCACTATTTCTTGCTGCCTTCTCCATCTACCCTCTCCAAAATTCGTCTTCATTTTGCAGTTAAGGATGCAAGAGGTCCAGATCCTTGAGGCTGTAAGGTTTCTTTTCCCTGGTCAGAGATTTCACCCGTAGCTTGGCTCCTCCCACTTAGAGACACTGATTGGTTCGCCGGAGAGCTGTGTGCTCGGAAAGAGGAACCTCCTTCTCCAGCCCAGATTGTGACTGACAGGGAGGGGAGGAGGAGCCAGAGAGGAGCAAGTTTGAGGAGGATTTGTTTTTCTTTGGATCCTACGAGCGGGAGGCGTGTCTAGGGCGTGGTCCTCGGGTCTGGCCCTGCCCCTAGGGTCCTACTCTGAGCTCAGTAACTCCTAGCCGGAGTCTTAGCGGGAGTGTTAGACTGAGCCGGTTCCTGGGCTTCAGGTTGTGATCACGGGATGACTGCAGTGGGCCGAAGGTGCTCTGCGCTAGAGCCCCGAAGGTGAGTGACCAAACTGGCTCTAGAGAGGGCAAGCGGACAGCAGGAGTAGACCAGTGGGGAGATGCTGGTTGCTGGAGCAGCTGACACACACTGCTATGGGGTTTTGTTTGTTTGTTTGTTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTAGGATTAAAGGCGTGCGCCACCACTGCCCAGCTTGGGTTTTGTTTTTTTTAACATCTGGGATTTTTCTTTCTTTTTACTTATTGAGGCAGGGTCTCATGTAACACAGGCTGTGCTCAAACTTTTTCCCGTAGTCCTGACTGTCCTGGAACTCACTAGACTGTTCTTGAACCCAAAGAAATCTGTCTGCCTCCCAGGTGCAGGGATTAAAGGTGAGGGCCATCGTCCTTAGCTGGTACTCAAACTCTTGATCGTCCTGCATCCACCTGTAGCGATGCTTCGCCTTGACCTGACCAAGAGAAACAGTGGAACTTCTGCCTCCCATCTCCTGAAGCGTTTGGGAGTTCTAGGGTGGGTTTAGCAGGCCAGATCAAGCCCTGTTCTGGTGCGCTAGGACCCAGTGTCCCCACCCCAACCTCAACCTCCAGGGGGACTTTTTGAGTGGGGCTCTCGGGCTAACTCTGTCCCGTGCTGGGCCTCTGGGTCTCCAGGAGCCCACATGAGTCTGAGATGCTCTCTGAGGAGCCATCCAGTTAGGCAGAAGGCTAGCTCAGAGCGCCAGTGAGCAGGATGGGACCCGCCTTCCTGAGTAGATGTCAGAATAGCCCGAGCTAAGGAGCTGGTGTCCCTCCCCCACCCTGGGAAGGCAGGGTGCACCTGGAGCAGGAGGAAGGAAGGGGAAGAGGTGAGGCTGCAGGGATTTCCTGGTGCCCTGTCTCTGCTGAGATCATGGGGGATGAGGCAGGAGGGGCCGACCTTCAGCTGGCCGAGTGGAGCACAGCAGCCCTGCCTGCATCCTCTGCCCAAGAAACACAGCCTTTTGGGGGGGGGGGGGAGTGAGACAGCAGGGTCCAGAGAACTCCCCTCACCCCCAAATCAGTGTGACACAGGGGGAGGCCAGGCCTGGAGAAGGAAGGGGAACCCCCATACCCTCCCTACCCACACAAGTGTCAAGCCAAGGTCCCTTTAAGCTGTCAAGCACCCATCAGGTGCTTGACTCTGTTGCTCCATTTTCCCAGTGGTTAGGCTGAGGCTAAAGGGGAGGTCTCTCCTGGGGTTAGAGGGAGGACTCTCCTGAGATGATAGGGAGGACTGTCCTGGGGTTATACATTGAGCATTTGTGAGAACCCAAGTTTACTCTCAGGCCTGAGTAACTCTTAGCTCAAATCTTTTGTTTGTTTGTTTGTTTGTTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAGCTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACTTGCCTCTGCCTCCCAAGTGTTGGGATTAAAGGCATGCACCACCACCGCCCGGCTTCTTAGCTCAAATCTTAACCACCAGGCCCTCAAAGAAAATTTCAAGACTTTCTACCAGTATTTCAAATGGCTTTCCACAGTGGCCTGGTATTGGGGCATACTTCACACACAAAAGGGCACATTGAAGCAGAGTTAGTACTTCATTCATTTTATTATTTTACACATTTTTCAACTTGTACTTATGATTACATTGGTGTAGGTCCTGTTAGAATGTGTGTCTATGTGGAGGCCGGAGGACAACTATGTGGCTCTCTGCTGTGTGTGGGATCCAGGGACCATGTTCCAATCAATCAGGCTTGCAGGACAAGCACAAGTCTTCACTCCCTGGGATAATTCACCAGCCTATCATTCATTTTAATGCTCCCGGAGGCAATACCCAGGCTTCACAGAGAGCAGTGAGCACAGAAGGTTGAATCTAATGGAGACCTCCTCCCAGAGGCAGAGGGTCAGATGGCAAAGCGGACTGATGAGTTACAGGGGCAACTAAAGAAGATCAAGCAAATTTACAATCAAGCGCTGAGATTGGCCTTGGGGGAAAGTGCTAGGGAGGCAACCTTAGAAAAGTTAGAAAGGAGCAGGAAGTGCTGGTAGCAGCAGCCGCCTTCAATCCCAGCATTCCAGAGGCAGAGGCAGGTGGATCTCTGAATTTGAGGCCACTTTGGTTGACAAAGTGAGTTCAAGGACAGCCAGGACAGAAATCCCATCTCCAAAGAACTGAAAACAAACCAAGCCAAACAATTAGGGAGGAAAAATAATTGGATAATGAAAGAAGCAAACACATTGCTCTCCGGGGAAGTGAGCCAAGCTGTGACAGCGACCTGCACGAAGTCCTGAACCGGGAGTGTCTTCAGCCAATTGGCTCATGGTAGAGATCAGAAAGTCTGGAGCAGAGGATAGGAGAAGGAAGCAGAGAGCGAATGGGTTCAGGTCCCACTCAGTCTTGTTCAGGAGAGTCTTTCTCCTTGCAGGTATGGTAAATTTAAACCTTTTTGTTGTTAATTTTTTTGAGTCAGGGGCTCATAGCCCAGGCTGGCCTTGGGTGATCATGACCATCTGACCCTGCTGTCACCACCTCTCAAGGGCTGGGATTTTGGGTGTGCACCACCATACCTGGCCTTATGGGGTGCTGTCGATGGAACCTAGGACCTCCTGCGAGCTAGGCAAGCACTCTACCCACAATGCATCTCCTGCCCGTGCCCAGCCTTTGGACATTGTGGCGTGAAATTGTCATCAGCAAAGCAAGTTTACAGTTGTGTGTTGGGCTTTGTTCACAGCTATCCTCAGCCTCGTATAAGTTGGTCACATCTGCAGGGGGACGTGAACTTAGCTCTGTCCTGCTCTGTAATGCCCGCCTTGAATGTCCCTTGCTATCCTCCCAGACAGCTACTTGGGAAGTACTTCATTCATTTTATTATTTTACACATTTTTCAACTTGTACTTATGAACTGGGATAAATGATATCCTAAAACAGAGGCAGGGCACCCTAAATTGTCCCAGTCCCAGTGCCAGGCACTGCAAACAGACCAGGACACCCTCTCCCCTTCCTTATTTCCTTTTGGAATGTTGATTCTGGTTCAAGAATTTCCAAGTCTCCCCAGAGTCCCACGACCCTTTCGGCCCTGAAGAGTGACGTTAGCTGCCGGGCATCTGGTAGTGATTACCCGATTACCCGTGGAGGGGGAGTCACTGGGGGCTGGGGGCGGCTGGTCCATGTCTTCTGAAGGGGCCCAGCTGCTCCTGGCTCTCATTTCCTGTGGAGATTTTCTCACAGTCTGAGAGACCCCAAGATGCCTTGGGCTGTGGGAACCTGACTATCTTAAAGATGAGCTGCGCCCCACGCTGACCTTCCACTCACACGACATCACTTGCAGCCCTCGGGGGACCGGTTTGCAGGTTGCTGGACCTGTGTGGAGTGGGGCCCAAGTAGGACTGGGTCAGACACCCAGTGAATGTGTGTCATTGAGTAAGTCCCTTTCTGCCTCTGAGCCTTAATTTCCCCTGATGGTGAAGACTAGATAGGAGGTCAGGTAGAAGGTGTGGACATGAACCAGTGATGTCTAGTACATGGCAGTTGCTCATGCTATAGGAGGGGAAACTGAATCCCAGGGAATGAATGAGTCTCACTCAGGATCCCAGCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTTTCTTTCTTTTTAAAGAAACATTTATTTATTTTATGTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGTCACTGGATTCCCTTACAGATGGTTCTGAGCCACCATGTCGTTGCTAGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGTTCTTAACCACTGAGCCATCTCTCCAGCCCCCGGGTCCCAGCTTTCTACTTCCTGTTTAGGTGCCTTTCAGAATCCCCAAGGAACTTCCCCAAGTGCTACTCACCCCATTTCCTGTTCCCAGTCAGGTCTCTTGGCTGTCTGAGTAAAATGCTATCTATCTCCTGTCTCTTCCCCAGCTTCCTTCTGTTTCCACCTGGGATTGGCTCCTCTTTTCCAGGGATGTCACTCCATAGGAGGGACACAACAGACACAGACCTCAGACCACTTCAGCTGTAGTCTGCGCTCTGTGCCTGGGGCCGGGCACCCTGCTTCAGCTGGGCTTTCCCTGCTTACAGTGTTGCACTCACAGTCAGCGGATGCTCTATCCTCCGCACTCTCTAAGGGCCTCTCTCTAGCTCTCAGCTCTCTCTGGCAGGCTCCCAGCCACCTTTGGTAGCTCAGGCTCAGCATCCTTGACTCTGCCCTTCCTCCTAGGCCAGTGCCTTTCCTAATGGCTCCTCACACCAGGAGGACTGGATCAGGGATGTGGCTGACCCAGTGGTAGCCTGTACTTTGGGCCAGGGCAGGTAATAAATCCTGGCAGAGACTCTCAGCTCCCGTGGCTGTTGCTGTCTCAGAGGAGACCCTGCTTTCCATCCCAGAGTTCTCTGCTTAGGCCACTGAAGCTGAAGGCACGCAGCAGAAGGTACCCACTGCCAGTCTCCACAATGGGTGAGAAAGATGGCCCTGGGGATTGTGAGTTCAAGGCCAGCCTGAGTTACAGAGAATGAGACCCTGTCTCAAAATCTAAAGCCAAGCCAACCACATATGATGATAGCAAACACCTGTTATAATCCAACATAGTACTTGGGAAGTTGGAGCAGGAAGGTGAGGAGTTCAAGGCCAGCTTTGGGTACACAGCAAGTTTGAGACAAGCCTAGACGTTTATTTTGAAAACATAACAAAACTGAGCAAAACAAAAACAGGGTCTGTGTAAGGAAAGGTCTAATACCCCAGGAGAGTGGCACCAGGATCTGGAACCCACTGGGGTGAGGGGACCCGGCACTGACGGTCACATGAGCATCATGGCCTTCCAGGCACACATGATGTCCCCTCAGAAGATGAGGAAGCCAAGCCTCAGAGAGAGGGAAGCAGGTGTCAGAGCTGCGAATCTCTTCTCGGGCCTTATGACCAGACCCTAAGGCCCAAAGGAAGAAGCTCAGGACAGAGGGTAAGGCCACGCCTGGCAGAGGGGTGGGGCAGCCTCCTTCTCCACTTCTTCAGGATCCTAGTGGAAGTTCACTCTTCCTTCTGGTCCAGGCCAGAGGTTCCTGAAGGTGAAGTTCTGCTTCCAACCCGCATTAGGGAAATAAAGGATAATGGGTACTAATTACTACTCATTAATGCAATTAATTAAACTGATCTATGCAGCTCATGGTGTCAGTTATCAGAACAAATCAGTTAATACAGGCAATTACAGGGTCGGTTATTTAAATAATGAATGCTGCCTCCGAATGGGCCTGATTTAGCCCAGTCCTCACTGTTGTCTGTTAACTGATCTCACCACTAATATTAGAGGGGAAGTGTCTTTTAAGCATATAGTGTAAGAAATAATGAATTAATTCTCGAAGCTGAGTTGTAAGGAACACTTTGATTTCTGGATTTGATCGTTGCGATGAAAGGGAGCATATTCTAAAAAGATCTCCGAACAAATTGACAGCTGGAGGCTGAGCAGGACTTACCCCGGCCCGTGGCTGTCAGGCAGCCACAGCAGCCCAGACCAAGGGGATGTAACGTCAGGTGCAAAGGCCCAGAGGTTGCAGACCCTGGAGTTCTTTGGAAATAGTTTTTGGAGGCCAGAGATGGAGTAAGAGTGAAGAGGGAGAGGAGGCATGTCCAGAGATCTGTGTAGCTCAGTGGTGGAGTGTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACAAACACAGTGCTGCAGCCAGGAGGATGTCTCAGTTACTACAGCACTCCTTTCATAGCTGTGGGTACCTGAGTTCCCACAGAGCAGCCAGATGTGTAATCTCTGTGTTCCTAATGTGAAGTGGGAGACAGGAGAGCCTTTGGAAGCTTGCTGGCCAGCTGCCATGGTGAATGCAGTAGGAAGCCAACACAGAGAGCCCACCCCAGTCAAGGTGGAAGGCAAGGATTGACACTAAGCATGGTGGGAGAGTCTCTGATCTCCACATGAGGACAGTGGAGATCAGCATGAGGGTATGGAACATCAGCGAACCCCAGGCCCCAGCGCAGTGCCAGGCAGAAGAGACTAGAATATGCAGCGTCATAGTATACATGGAGTATACATGGAGGACCAGCCAACAGCCATCATGCAGTCTTTCTCTTAGGCTGAACAATTTGTTCCCAGACAAGGACCTCAGATTTCCCATCTGCAAAATGGGACTGCATGGGTCTGCATTCACAAACTTGCACACACAGACACATGTACACACAGACACACACATGCACACACACAGACATGCAAACAGTGTACACACACTCACACACACACACACATACAACCATACAACACACCAGATGACTGTTAGCTTCTCAACACTGTTGTAAGCTGATGTCTGATGTCCAGAGGGAAAAGAACAAGCAAAGCCCAGTGGGGCACAGTGGCTCAAGCCTTTAATCCCATCATTTGGTAGGCAGAATTCTATAGCCTGGCCTATAGAGTGAGTTCCAGGACAGCCAAGGGCTACACAGATAGTCCCTGTCTCAAAAAACAAAACCAACCAACCAAACAGCACAGAGGCCCTCCGGAGTTGGTGCTGGGGCGTGAAGGGGGTACTTACCATCTGGCCTTGGCCGGAGTAGCTCCATGTAGTGAGTGTGTGTGGGCGTGGCCATAAGGAGCCCATCCCCAGGAGTCTGTTAGTAACCTTGCCTCCCAGGCTGGTGAAGCTGGGCCCCTGCTGCCAGACAGGGCAAAGGGAAACTGAACTCCAGCTTTTATTTTAACAGAGCTACTAGGAGTTGATGAGTGTGTCTCAGGGCCACAAATGGAGGAAGGGTGGCCTGTGGTAATCTTCAGGCCAGTAATGGCCATAGGTTATCAGTGGCCATAGTCATGTTGTGTACTGGAATGACTGAGCTATGACTGGCAAGGTAGGGGAAGGGGTTGAAGTTCCTTGGGCTGTGGCTCTGCCTTGGACAACCTCCCTGGCTCTGACCACCCATGTAAGCTGGGCAGCACCCCATCTTTAGGGCTGTATTCCTGCCCCAAAACCTAAGAGGAAGTGGACAGGAAACAGGAGGAGGCACAGGGCTAATCCCAGTGTGTCCCTGACAATTTGTTCCCAGCACTGGGAGGATTTCCGGGCCTGAATGGCCGGAAATGTTGGGATGGGACACCTCACCCGGGAAGAGTGGACAGAGCGGACAGGGGAGGGGCTCCATCCTCCACCCCCTCCCTTACAGTGTCACTGGGGGAGGGGCTCCCTCCCCCACCTTCCTCACAGAGTCACTGGCCAGGGAGCACTGAAGAGACTTTAGAAGCCTGTGCTATTGCAGACTGCAGCTTAAGGGGCAGAGGGTAGAGGCCAGGAAGGATTTTGTAGCGGGCAAAGTTAATAATAGAGGACTGCAGAATGTCAGAACAGGAGTAGCTACAGGGAGCTGGGAGCCTTGGCCTCAGGAACTTCTTCTTTTCCTTCCTTTTTTTTTCTTCTTTCAGCTCATCTTTTGTTTTGAAAATTAGGCTTCTGTGTTTGAGCATACACTCCATTCCCATTTTGCAGATGGGAAATCTGAGGTCCTTGTCTGGGAACAAGTTGTTCAGCCTAAGAGAAAGACTGCATGATGGCTGTTGGCTGGCCCTCTTCTTATCCATGTATACTATGACGCTGCATATTCTAGTCTCTTCTGCCTGGCACTGCGCTGGGGCCTGGGGTTCGCTGATGTTCCATACCCTCATGCTGGTCTCTTGTTACTTTCCAGTTGAGAAATAAAAGCGATATGGTTGTTGCAGGTAGGGATCAGAGAGACGAGGGGGACAGAAGTAGGTGGGAGACAGAGAATAAGGCTGAAGGGCTGTTGTACGTGGGGTGGCCAGGCAAGGCTTCTCTGAGGAGGTGACTTTAAACTGAGCCCTGAATAAAGTAGGGGAGAAAAAAGCCTTGTGAAAGTCTGGGGAAAGACTGTTCCAAGTAAGTGCAAAGGCCCTGTGGCAGGAACAAGCAGGTGAGGCCAATGCAACTGGGGCAGGAGGGACAGCATAGTTGAGGTAGACATCGTAGAGTGTTGGTGTGGTAGGCAGGGGGGGGAGGGTGCCAGCAGCACACAGAGCCATAGAGGTCAGGGAGCTAGGTCCCAGTTTTCTGTCATAGTAACAGCACCCCTTTATTCTCAAGTAGGTGAGAAGTTTGGTTTGGATGATAAATTACATTGCTGTGGAGGGGAGTCCAGATTTTATTATTTAGCAGATGGGGTCTGAGGTCGTGGATCGGCATAGAGTACTTGCTTAGAGTATGCAAAGCCTGGGCTTTCTTCCCCAGAACTGGAAAAGAGGGAAAGAATTTTAGACAGGCCTGCAGTTGTTATAATTTCTGCTACTCCAGAGGCTGAGGCAGGAGGATTGCTTGAGTATAAGAATCAGACTGGACAGCAGCATAGTGAGCCTTGGTGGGTAGGGAGGGGTAGGGAGAGCGCTGGGGACTGAGGCCACCTGCTGTACACTGAGTCGCTGTCTGGTGTCAGAGCTGAAGCTGACAGTAAGGGGGTAGTGGACATGGGAAACCACAAGAAAGCCATGCAAGCGTCAGTGGCCTGGCTGCAGGGACAGACTCTGCCTTTCATTCTGAAGGGAGGAGTCCCTCCTGGGTAGTGTGTGGCCTGTTACATGGATCAAAGTCTGCTGAGTGGGGTGTAGTCTGCTGGCCTGGCTGGTCCAGGGTAGAAAGTGAACCTGAAGCTTTGGCTGTCTCAGCAGGGAGGAGGGAGCTGGTACCCAGCTGTGAAGGAAGATAGGGAGGACCAGGAGCTGCTTGTGCATAGCAAACTGGGGATGCTTCTCACATAGAGGACACTGGAGGGGATGGGTGTGTGTGTGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGGTGCTGTGGCTAGGAGAAAGAAGTGACTCACAAAGGGGAAGGCTCTCTGTTCAGCATCCTGGAAAAACTGCCACCTCTGGCCTCTCTAGGCTTCATTCCTACCACCCTGAAGGCAGAGAGAATAGGTGTGTGCTCGCTGTAACCAGCAGTAGCCAATACACTGGCAATGTAGACCAAAGAGTGAAGGGCCAGGGAGGGGCTGAGCCTCAGACTAGGTTCTCTAGTGTATAGACTCAGGCCCTCTAGTGTAGACTCAGGCCCTCTAGTGTAGACTCAGGCCCTCTAGTGTAGACTCAGGCCCTCTAGTGTATAGACTCCTAAGTAGGGATTATGTGGAAGAGGCAGAAAGAGGAAACTGACATCAGGAAAACGCGTGTCATGAGCTGGGTGAACACTCATCCCGAGTGCTTTCAGACAACTCCATTAGGCAGTGGCTGTCTTTGTTCCTCATTTATGGAGAGGAAACTCGGGATCAGAGAGGGGAAGGAACTCGTTCAGGGCTGCACAGCTGGGAGTGGTGGAGTAGCCATAGGATTAAGCATCCCGGGCTCCAAGGCCAGGACCAGGCCTCACATCAGCTGGCAGGTGGACATTCGGCATCTGAGAAGTGCTGATGGTACTCACCTCTTTTTTCTTCTTCCAG
Seq C2 exon
GACTGCTGCAGAGCTGGAGGCCGCTGGGGACTATGTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000059013:ENSMUST00000074248:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.897 A=NA C2=0.500
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types