RnoEX6000605 @ rn6

Exon Skipping

Gene

ENSRNOG00000049259 | LOC102549842

Description

zinc finger protein 91-like [Source:RGD Symbol;Acc:7600894]

Coordinates

chr1:37951840-37957412:-

Coord C1 exon

chr1:37957280-37957412

Coord A exon

chr1:37956016-37956114

Coord C2 exon

chr1:37951840-37954277

Length

99 bp

Sequences

Splice sites

3' ss Seq

TGCCTTTTTCCCACAAACAGGTC

3' ss Score

10.41

5' ss Seq

CAGGTATGT

5' ss Score

9.8

Exon sequences

Seq C1 exon

TTTCAGGAAATGCTGTCATTCAGGGATGTAGCCATTGATTTCTCTGCAGAGGAGTGGGAATGTCTGGACCCTGCTCAATGGAATCTGTACAGAGATGTGATGCTGGAGAATTATAGCAACCTTGTGTTCCTGG

Seq A exon

GTCTTGCTTTCTCTAAGCCATACCTGGTCACATTTCTGGAGCAAAGACAAGAGCCTTCAGATGAGAAGAAACAAGTAGGAGCCACCACCATGCACCCAG

Seq C2 exon

ATATAAAACCATATAAATGTAAAGACTGTGGCAAAGCCTGTGATTGGAACTCACTCCTTCTTGAACATCAGAGAACCAATCCAGGAGAGAATGCCTACAAGTGTGAAGAATGTGGTAAGGCTTCTGGTTCTTGCTCAGTACTTTCTGAACACCGTATAATTGATACAGAAGAGAAAGCCTACAAGTGTGAAGAATGTGGCAAAGTCATGTGTACGTGCTCAGGAAATTCTAGCTACCGGAGAATTTGTATTGGAGAAAACCCCTACAAGTGTGAAGAATGTGGAAAAGCCTTTTCTACTTATTCGTATCTTGCTCAGCATGAGGTAGAGCACACTGGACAGAAATTTTATAACTGTGAAGAATGTGGGAAAATGTTTTATTTTCCTTCTCACCTTACAGAACATCAGAAAATTCATTCTCAAGAGAATCTCTTTAAGATTGAAGTGTGTAGCGAGATCTTTTGTGCTCCCATAGAACTTTCTAAAGACCAGACCTTTTGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000049259-'0-2,'0-1,2-2=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.252 C2=0.004

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=100.0)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=2.7),PF0009621=zf-C2H2=WD(100=2.8),PF0009621=zf-C2H2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.0),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.2),PF134651=zf-H2C2_2=WD(100=3.1)

Main Inclusion Isoform:

ENSRNOP00000067564