RnoINT0017305 @ rn6
Intron Retention
Gene
ENSRNOG00000005008 | Angpt4
Description
angiopoietin 4 [Source:RGD Symbol;Acc:1307539]
Coordinates
chr3:147422095-147436216:+
Coord C1 exon
chr3:147422095-147422554
Coord A exon
chr3:147422555-147436060
Coord C2 exon
chr3:147436061-147436216
Length
13506 bp
Sequences
Splice sites
5' ss Seq
AAGGTACAG
5' ss Score
8.04
3' ss Seq
AGCCCTCTGTCTCCCTACAGCTG
3' ss Score
12.07
Exon sequences
Seq C1 exon
TCACAGCAGTGAGACTTTGCAGCCAGGTCTTCACAGGCCCCAGCTGCACAGCACATCTGGGCTGGCTGCTGGTAGTTACCTGCCCTGGTACCTCTGACAAGACCTCCTCATCACCGCTTGGTCTCGGATGCTCCGCCCGCCAGCTATGCTACTAGATGGCCTCCTCCTGCTGGCCACCATGGCTGCAGCCCAGCACAGAGGGCCAGAAGCCAGTGGGCGCCGCCAGATTCACCGGGTCCAGCACGGCCAGTGTAGCTACACCTTTGTGCTGCCTGAGCCAGATATCTGCCAGCTGGCGCCGGTGGCACCTGAGGGTTTGGGGGGCTCCAATAGCCTCCAGAGGGACTTGCCTGCCGCAAGGCACCACCTAACAGACTGGCGAGCCCAGCGGGCCCAGCGGGCCCAGCGTGTGAGCCAGCTGGAGAAGATTCTAGAGAATAACACTCAGTGGCTGCTGAAG
Seq A exon
GTACAGCTGGGGTCGTGTGGCGGGCTAGAGGGTGGCTAGGGGGCTGCCCTATGGACAGGCAGAGCATTAGCCCAGAGGTGTTCATCTCAAGAGAGAGGGGCTCAGGCTCGGTGTGGTATAGAGCCTCCGGGATGTGGGTCCAAAGAGGGCCCTGGATGAGGATGGCTGTGAGGCCTCATGTGAAGGCTGAGTACCATCTGCCCAGGCTTCTCTCAGATGTCCATTCACTCATGTAAGAAGAATTCGCTGAGTGCTGACCATGAGTCAGGACCATTCTAACTGCCCGGGTATCCCCACAAGGACAGGACAGTACATTCCTATCTAATGGGCTGGGGAAAGGGCGTAAAAAAGTCATCTGCTCTGTGGGGCAGTGACACACGTGGAGGTGGGGCCAGGAAGAAGGTACAGGATGGCTTACCCAGGTCAGATCCTTGGAGGGTCTCTGAGGGAGCGAAGAGAGAATGGGTACCTAGAGGGCAGGCATCCTAGCCAAAGAGAGGGTACAAGAGACAGCAGGTCAGTTGGCAGTAGGAAGGAACATGGGCGTTTCTGCGTGGATGAACGAACCACAAAGGCATGTGGGACTCTGGCTTCTAAGCGACTTGGCTACCACTGCCTCGTGAACAAGCTGAGACCGATGGATTTGGTTTAAGACGTTATGAGGTAGGATGGCCTCTGGTAGGCCAGACGTGTGGTCTCCATGGATTCGGCAAGCTCTATACATGAGGGTCTGGAGGCCTACGGGATGGGTGTCTGACTCTGCTTTATTCTGGTGAATCACTGATTAACCTGAGGTAAGGTTTGCCGCTGCAGTGTGAGCCCGGTGCCAGGACCCGTGAGGGGTCTCTGGTCATCTTGCTCACTCTGCAAATGCTGAGCAACTGACGCCTCGGTGAGCACCGGCTACAGAGCTGAAGAAGGCAGGCTGGGCTATGCGTGTGTGGGCAGCATCTTGTCCTGTGGGATCAGGATGCCAGAGTCCCTGAGTAAGAGCCACCCAAGAAAAGAGGAGACCTAAAGCCATATGAGGAGAGGACAGAATCAATCCATGGAGGCCTAAAACAAGGTAGAAGGCAGAGAAGCCTGACGGATAATAACAGGTAGGCTAACGGCCATACAGAAGGCCTTTATTGCCCCTGCGGCTTCTATACTGCTGGAGGTTTTTTTTTTTAATTATTATTATGTTTGTTAACGTATTTGTCTGTGGGCGCATGTAGGTTGGCACACACATGCCACATGTGTAGAGGTCAAAGGACAACTCGTGGGAATCACTTCTCTCCCTCTGCCATTTGGGCCCCAGAGTTCAAACTCAGGTCATCAGCAAGTCAACAAGAACCTTTACCATCGGAGACATCTTGCCAGGCTCTGAACTTCTTAAACTAGACCATCAGTTGATAGTAAAGGCTTGTTCTCCCATAGAGCATGCACATTCATTATTTACACACATGAACCCATACTAAGACAGCATGCACCCATGGGTGAGCTCCCTGCAGTGAGTAGGCTGGACTACATGTACTGAAGTCGTCTCCTCTCCTGCCACACATGAGCCTGAGGTCCATGCTGCAACCCAGCTGCTGCTCCTTGCCTTCTGCCCCTCAGGTCTTCCACCCCACCTCATTCTGTGCCCATTTCCCTAGCTTCCCTTGCTGACTGTTCCAGGCTGCCTGAAGCCCAGTTCTGTGGCAGCCGGCCCCAAGTTCTGTGAGATATCTGAGCCAAACCTTCCTCTCTAACCTTCCTCTCCTCCTCTCCACTCATCTCTCGCCAGATGTGTTCCAGCTAAAATAAACAGCAGAAGGTATGGGCCACTGTCCTATGCCTCCCAGTGCCCAGAGCGTGCTCAGGCTCAGACGGAATAGGGGCCCTCAACCTCCTCACCTCCCCCTTCCCACGTGGACTTTCCTCTCTCTGCTGTTCATCTCCTCGGCATCTAATCAGCCCCAAGCGTCCCCTATGCTCAGGACGATGGAGGTGTTTATAGCACATTCTGTGCATCCTTTCTCCTCAGGTCATCTCTCAGGTCCCAAGTCCTGTGACCACAACTCAGTTCATCTTCTTAGACCTTGGGACAATGTTAGCAGCCAGAAGCATCTTCCTGGGTTTTCCCAGAAGCACTCTTCCTGCACCCAGTCCATCTCTCGTAGCCCTGCCTGGACCAGCTGTGGGCTTCTCTGTGCTCACTGGCCCAGGACCCGTCATCTCTCCTCTAGACACTGTCTTTACTTCTTTCTAGTTCCCCACCCCAAGTCCCACCCTCGCATCCCTTGAGTCGCCCAGGCCTGGTGTTTGGGAAACACTTGAGTCAACAACAGAATTTGACTTGATGGTTTGAGACAGAAAGGCACTTGGCCCAACACTTTCTATGGCACAGGATCTTCCCTGGGTGCCACCAGCCTAGACTGGTGGTCCAGGGAATCCTGTGGGGCTGAGCAATGATGGGAGAGTCCTCCAGCCTGATCTCACATTGGTGATCCAGATTAGTCATGTGGTTATGGGTGAACAAGCCTGTCCCCTCATCTGAGAGAAAGTCAGGTGGTGCTGGGAAGACTGAGACCCTCAGGCTCCCTTCACTGTTGTGTCCCAGCTACATGACACCATGCCAGTGTGGAGCAGCTCACCAGGCACAGTAGCAGGGGGCTTATAGGTCTGTAGCTTCTCAACACAGTTCAACATCCCAACTCTGAATTCACTCATGGTCCCTCTTAATCACATGGACCAAAGGGCATTAAGATATCCCTTAATCACATGGACCAAAGGGCAGTGAGATATCCCTTGGGGCAAGGAATGTCCCTCACCCGTGCCATATTCTCAACAGGCTCCAGTCTCTGGTGGGCAGAGACTTACCATCCTTAGGGTAAGGGGCCTCTTGGTTGAGTACAACCTTTTACACCCCTCAACATTCATGCCAGGTCAAACACCTGTACAGCCTGCTACAGATAAGACCTATGGACCTACACAGACCAAGAAGTCACTGGGCTTGCATGTGTCACCTTGCAAAGCAGCAGAGCCAGGAGCGGGAGAACTCTGACCCTGAAGCTTCAGTCAAACCTTCCCTTCACAGTTTTAGAGGCTTTGCCTCCCCAGGCCTCACTAAAGGAGAACACTGCCCAGGGCATTCTCTGCTCACTCGGGTCTCAGCGTGTGCAGACTGCATCAGAGTCCTCTTTGCAAATAGATGGCAGTCCTAAAGGTTTGAATAGTCATACACACATGCACACATATACACAAATGCAAACACACACATGCAAACACTCTCTCTCACACACACACATACATACATGCACACACAAACACACACACACGCACACACACACACATACAGACGTACATACACACACTCAAAGATCATTCCACAAGAATTCACACCCCTTGAACAGGTATCATCCCAGCCCAGGGTTGCTTGTGCTGCCTGTGGGTGTATCTGGGACTCTCCTTAGCTTCCTGTTCCTACCTGGCATTGCCTCAGAGCCATGAAACTCTGTCTCCTCTTCAGCTTGTTTTTGTTTCCTTTTTTGAAAGAGTTTGAAAACATTCCCTGAGCACATCTTCATCCACATAGCCACCACAATCCTGCCTCAAGCTCTGTACTACAAGGTCTGTTTCTTTGAAGCTGCAGGAGGGACAAGCCCCGGCCCCTGCTGTGAGCTCCAGTAGCCTCCATGCTTTTAGTTCCCTGCCTGTTCCTACGTTGTACCTGTGAGGAAACTGAGGCAGAAGGCAGCAGTTCTCCCTCTGGCTATATGTGCCATCTCCTAACTGTGGAAGCTGGGACTCTGGGTGCTAGGCGACAGGGAGCCTCTGGGTCAACACTTTCCCGAGGTGTGACTGCTGGGGTCACCCACACTCAGGATGTTAGCTCCAGCCTCATTTGCCTTCTGTACCCCACTCTCCTCCCCACTCACTCCTCTCTCCTAGAAAGCTCCTGTTCAGTGACTCATGCCTATTGTGGGCCATTACACATCAGTGCTCACTTCCGCTCCATGCTTCCACCTGGGTGAACTACTGTTACCAAGAGGGAGCCGGCACGGACAGCTAGTGAGAGGGGTTCCTGCTGAGCAGTGTGGTCCAGCCAGAGACCTTCCAGGGTGATCAGGAACCTGCCTTAGGACAGCAGCTATAAGACAGAACAACAAAGGTAGCTAGCTACCCAGAACCTTGGGCCTGGCAGGTGAATGTCTGCCCCCAGCAGCTTCTCCATAAACCTCCCTCTCATACTGGAGCTGCCAGTTAGTCATTATAGGCAGTATCTCAGGTTTCTCGGCCACAGAGTGCCATCCTTGACTTCTCCCTGTCCCCACATCTCTCTATGAATGAGAAACCCCCAGTCGATCCCCTAGTGCTGGGCCTTAGCCTCTGTTTACTACCTGAGAACAGCATATCTTCCCAAGACTTAGAGCCAGGGGGTCGGGGGGGAGTAGGCGCCATCTACTCAGGTCTCGTGCTTACTTACCAGCCAGAGACCTTCCAGGGTGATCAGGAACCTGCCTTAGGACAGCAGCTATAAGACAGAACAACAAAGGTAGCTAGCTACCCAGAACCTTGGGCCTGGCAGGTGAATGTCTGCCCCCAGCAGCTTCTCCATAAACCTCCCTCTCATACTGGAGCTGCCAGTTAGTCATTATAGGCAGTATCTCAGGTTTCTCGGCCACAGAGTGCCATCCTTGACTTCTCCCTGTCCCCACATCTCTCTATGAATGAGAAACCCCCAGTCGATCCCCTAGTGCTGGGCCTTAGCCTCTGTTTACTACCTGAGAACAGCATATCTTCCCAAGACTTAGAGCCAGGGGGTCGGGGGGAGTAGGCGCCATCTACTCAGGTCTCGTGCTTACTTACCTGTTCTCTGTAAGTGCAGCTTTATGGTTCCAAGGCCTGCCTACTGTCCAATACTTTGTCTCTGTCTCAATTCTTTATATCACTCTTTTTGTTTCTGTCTTTATCTGTCTTTCTCTGTCTCTTTCTTTGTGTCTGTTTTTTTTCTTTGTTTCTATTTGTCTCTCTGTCTCTCTGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCTGTCTGCTGTCTCCTTGTGCCGCTCTCTCCTCTCTGACTCTTCTTGTCTCCTACAGGTGCTCCCCACAAAGTCCTTAAGCCACTACTCCTGCCTCTACCTCCCTAGGTGTCCAATCTGGAGATCTTGGACCCAGGACCCCAAGACTGGTTCACACCCTCAGCCAGGCTGCTAAGCTGGGGTGCCTCTGCCCTTCTGCCCACAGCCACACAGGGAAGGAGTCCGCCTTCTCTGATGTGCAGGCCCCTGGCAGCAAACAGAACAGCTAGGCCCCTCAACCCAGTGGCCTGGCTTGCAGGCCAAGGGTTAGGAAGGCATTCAGCAGGAGCCTAGTGTGGGGTCCTGCCCCCCCAGACCCTCCCGGACTGACAGGGGCTCCCAGCAGCCCTGGCCTCCCCAGGCTGCCTGTAAATTCTTGGCATTTTCAGCCTTCGGTTATGCAAACAAGAAATAAATCTCAGTTGCCACAAGAAATAAATCTCGGTTGCCGAATGGAATAGCTTGGGGTTGATTTCCTAACCTCTTCGCTGGCTTTCTGGGCAGTCGGTGCGGGGGATGGGGTGGAGCAAGTGGCCTCTGCTTCTCAGAGGAATGAGATGATATTTCCAAGAAGGGCTTAAAAACTGCTGTTCCAGAAGTCCTGGCCTAGGGATGAGCAATTGGCTGATATTCAACTGGAGGCCGCAGCAGCAGCAACAGTGGCTGCCTAAGACCCGTCTTGCCCCAGAGAGACAGGTTTATTTGTTCATGTGGCTTGGCTAGTCAGCCTGTGGACCAGGGCCATGTGTGTCTAGCTGTCTCCTCCAGTGCCTAGAGTGCTTAGGCTAGGATGCACATCCTCTCTGTCTCTCTCAGAGCAGGAAACGCAAGCCGCAGACATGTCTATGAGCTGTACTTCCTCTGTAACATTTGATCACCTCAACTTCAGCCACATTCAGCTACTTCAACCTCAGAGAGGTCCTGGACTATATCTGTGTTGGCCTTAAGGGCCACCCAATGCCTGAGGCACATGCGGCTATGGTAAGGAGCATGTCCTAAGGGTGCATTGGCCAGCTGTGGGGCAGTGGGGGAGGTCATCTCTATGGTTGGTTTCTCTTGGAAGGGAAAGTTGACATGCTCCCTGCCTCCTGGCGTAACCAAAGGATAAGGACAGGAGAAATTATGGTTGACATTTGCTGGGCACACAGATTGTGCTCTGTACTTTGTGTTGGTTTTAGCATTTAATTTTCACTGTGACCTAAGACGATGAGGTGGTCAGTGATGAGGAGATTGGGGCCTGAGGAGATGGGGTGACCCGTCCAAGATTACGTGGCCAGGGAGTGTAACGTCAGATGAGAGCCAGGATTTAAGAGCCTTGTGGCCCTAACCCAGCCTCCACTGGTCTGTAACACACAACAGGATCGCTGTGCAGGTGTGAGGGAAGGAAGATCATTTCTGAGCAGCTGTGGGCACCTTCCTCAGGAAGCTCTTCAGAGGGAGAGGACAGGAGAGAGAGGCCAGCAGCATCCCTCCGCCTGGCATAGTCTGTTCATTGCCAGCGTCTTTGTCAGTCTGCTCAGCCTGATATCAGACACATCAAGTCTCCTGGTCCTCCCCGTCAGCACCAGATTAGTTTCCTTGGTTTCCTTTGGGCACTTTAAATGTTCGCTGAAAAGGTTCAAGTATAAGAAAACAGAGAGAGAAGGCATTCAGCTAAAAAAAGACAACATTTCACCAAGGCCATCATGCTCCTGCCTCTGCTCCTTTCTCCCAGAACAAAAAGCTATTCTGAACCTTGTTCTGGGGTGCCTGCTCTCCTCCTGTCTCCTCCAAGCAAGGTGTCAGACCCCCCACCCTGCCTGTGAGAAGTACAGCCTCTACCACATACGGTCATATCAGCCATCCCCCATGACCCTGTACCTGACCCCACTCTCATCTCCAGAATGCCATCTTCAGGCATTGAAGCTTGACTGATAATGGCTCAGCCCAGGCCTGAAGAAAGAGTTCTTGCCCTCTGATTAACAGCCTCATTTACCGGCTTCAGACAATGTTTGGCCTCTCCCATCCTCAGTTTACGCAATTGCCAAGTAGGGGTAATCACCATTTCCCTCTGGGTTGCTGGGGACCAGCTTAGAGAAGGGCCTTGCGCTGCAGCTAGCGAGGAGGATGGTGAGTGCTAGAGCATCCCTCCTTCTAGATCATGAGGTTGGGGAGCAGAGCAGGTGGGGTCCAGTCAAGGCCAGAGACTGTCTGAGTTCAGCGCAGAGTCTTGACTTCACTGATGAGATGAGCCAGTTCAAAGCAAAGTTGGATCTTATTTTTAAAAGTGATGTTGAGCATGGAGTTAGTAGAAAGAGATACTATGGGAAAGGAGAAGGAACTCCCAACCATGGATACTCAAGGTCTCACTGAAATGTCTCAGCGGAAACCACATTCTCAATTTTGATGGCTCTAGGGTCTCAAAAAGTCGCTAAGAAATTTTTTTCGTTTCTTTTCCTTCTTTTTAAATAAGTAGAATTGCAGGGTAGTTCTAGGGTTGCCTTGGATGGGAAACTGGGAAACAACCTCGTAGGATAAAGGCATGGGTCACAGGGTTGACAAGGGCATAAGACATTCCTTTGACTGCAAATGGCATTTCTTGTGAGACCCTTAACAAATTGTAGCTTTGCAGTAAGGAAAAGAGAAAGGCCTTGTCTGCGTAGACCTCAAGCGTGACTCATCGCTATTTTGACTTCTTATTTGAAAACATCTTGATATCAGAAAAAATCCTGTCTGTATGTTGGCAACCCTCACAGTCAGTGTTCAGTGTGCCGGAACTGTTGGCTCTCGGGGGAAGTGGGGGTCAGGGAGGGTCAAAGCTTCAAGCAGATTCCAGAATGAAGTGTTCCTTTTGCTCAGTGCCACCCAGTGGCTTAAGTCCAGGAGACCTTGCAGAAGTGTGGCTTGGTACAGCATTCTGGTAACTCAGCCATTCCCCTTGGGAAGGCAGTGCTGAGTGTACTCATAGCAGGGGTCTGAGAGGCTCAGCATCGAGGAAGGCCACTGGGGCCTCTCCAATGGCTACAGCAGGGAGAATTGCAGCTGGGCGGGAATGGAGAGCTTGTTGTTCACACCATTCGTCTTGGCTCCTTGTCTTTAAAAAAAAAAAGTTAAAAGTAGCTTAATGTGGAGCACCCCTGTAATCCTAGCACTTGGGAGGTAGAGACAAAAGAAGATGGGTGTCCAAGACCAGCCTGGGCTACATGAGACCTTGACTTTCAGCCCTGGGGGTAGAAGCTGAGAGGGTGGGTCCCATTGACCCAAGGTGTGGCCCACTCTAACAGTAGCACTAACGCAAACAGTTGCTTATCTGAATCCTGAACTTTGAGCACTTTTTCCCCAGAGAAGACACAAGGGGCCTAGTGCTGTTGCAAGCCTTAGGCTTCACACCGTGTGCACACTTCCATCTCCCTTGGGGGGCCTTTGTTCTTGCTTTCCCTCAACCTGAAATCCCTCGCTCCAGGCTTTCTCTCAACTGTTGGGTCTCATCCTCTCAGCTCAGATGACCCTGACCAGCTCGACCCAATTGTTCTTCCTGCCCGGTTTCTTTGTGGTGCACATCACTAGTGTGTCTGGCAGGAGCCCTGGAATCAGAAGACTTGTCAATTCTGCTCATCCCTGACTCCCTATACCAAGGACAGAGCCGGAACACAGCAAGTGTGCCTGAGTGGGTGTGTGCCGGAAACCCAAGGTCCCACATTGGTGTAAGCAAACAGTTCAAATTATAATACTTACTTTTCTGGGACGTTTTCTAGACCCTTATGTTAGCAGGTTTCTTCTTATCGGGACATAATTCACATATAGGAAAACCCATGTGAGGCCATTTTAAGCTATAAGGTAATGCCAGCATCCCTAAACATTCCCATGTCCACCCAAGGCCTGATGAAGGTAGCTCATGACTTACTAAAAGGTCCCCTTGGTAGAATCCCACATTGGCAGACACCAAGTCTGTGTTTTTCACTTTGGAAACCCGTCCCTGTGACTGGGTACACTAAAGACTCCTCTGCTCCTTCTCACGGCAGACTGGAGCCCACAGGGTGACTGGAGCTCAGCTATTCAGCTATTTTCCAATTAAGATCCATTTATATGGATAACACAGGGGCAAAACAGACTCACTTGGACTGCTTAGCCACCAAAGCCACACACCCACCGGGGTCTGCATGGAGGGTCTTTCCTTTCATCCTTAGTCTCTGCCTGGTGAGAGACTATCCTGGTTCTCCTCTCTTCGTGCCCTCTTCCCCTCAGAGCTGTGCTTACTGACCCTGTAGAACATATCTGTAGAATGAGGCCCAGGAGCCTGCATGGAATGCAGCAGAGTTAGACTTCTAGCCCGAGGCCGAGGTGAAGTCCAGGCTGGGGACTGGTATGTACTCAGCTCAGATTATGAGACTATGCTGCTCTAAGGTGCTAGAAAAGGCACTGATGCCCAGATAACAGCAGACCTGCCTGCGTCAGTCTCTCAAGTGGATTCCTTTCCACAGCCATTGGCTGGTGCCTCAGCCTGGGGCCATCCCCAGGCGCCTGTCTAGCCTGGTGTTGGTATCCAGAAACCCAGCCTGGCTGAACCAAGCCATCTGGCTGGGATTATCTTCTGAGGGCCCAGGCCAGTGGGTGGGCTAACAGATCCAGTAATCGGATCCAGCTGTGAATGACCTATGTCCCACCCATCTACTTACAGCCACAGGCCCACTAGGGGAAAGCAGAGACTGCTTTTAGGGAATCCTAATAACTCAAGAGGGCCCTAAGTCACCTTGAATCCTATAGGATGAAGGAGGCAAATTGAAGGTTTCCTATATATATAAATTATAACTTGGAACCTACCCTGGGGAGGAGAGGTGATCACTCTGAAGTGTGGAGAGGTGTCCAGAAAGTTCTCTACTCAAGAATGAACTTGCTGCTGACTGTCTAAGTAGAAACTTGGGGCCCTGGAGTCTACATCTAATCCATGGTCCGGAAGGCTCCTGCTGAGCAAAAGAATCTTGGTGCAGACCCTGCAGTGCACCTACTGGTGGACCCTGACAGTATCCCTAGGGAGCTGAGGGAAGAGGTAAACAAACTGGAAACTCTTGCCGGGACCTCAGGAGACAGATTTAATAGCAGGACATGTCAGGTGATCAGAGTCAAGATTAAAGACTGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGCTCCCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAAAAAAAGAAAAGAAAAGAAGATTAAAGACTGGGTTTGGGACTTCAGGAAGGGGCAGGGCCATTCACTGAGATGAGCAAAATGGGAGCAGGGACATGGAGGGAAATGGCATCAGAGTCCTATGCTGGACCCTGGAGGAGCTGGCTGTCTGGTTGTTCTGAGGCAGGGTCATGTAGCCCAGGCTGACTGTGAATTCACTATGTAGCTGAGAATACCCTTACATTACTCATCCTCCTGTCTACCTCCAAGTGCTGGAATCATAGGTGCATTTCCCCATATTCGATTCTAGAGGGGCATGTTTGAAACCTGTGCAGATATGGAGGGTCTCCAGGAGGAATTTCTCAATGGAATTGGTGGTTCATGAGCTATGGAGATCCCCAGAGTAGACAAAGCACACAGGCAGCACCCTGGAGTGGTTGGAGCACTGGGTCCTTCAGTATCTGGCCCCAGAGAAAGCCATAAAATCAACTAGGTTTGGGGAGGTGGAGCCATGGCTCAGCAGTTAAGATCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGATGGCTCACAACCATCTGTAATGGGAGCTGATGTCCTCTTTTGGCAAACAGATGTACATGCAGATAGAAAACTCATATAAATAAACAAAAATAAATCTAAAGATAAAGGAAAAAAATTTAAAAAATCAACTAATTATGGTGGCACTTGCCCATGAGCCTAACACTCAGGGGGCTAAAGCAGGAGGATTGTCATGAGTTCAAGACCATTTTCCTAAACTCTGGGCTATAGAGCAAGACCCTGTCTCAAAAGGCCACACAAACACACACAAAAGAAAAACTAAAGTCGATGCTCTTAGAACAATATCTAATAATATTGTAGTCGTAATCTGAATATTAAAGACTAAATCGACAGTGAAATTGTTGCCTCATCCAGTGGCGGGTTGATGACTCCCATAATTCCATAGTCACAGTGAGTGAGAAAGACAGAACAAAACAAAAAGTTCTGTAGACAGCATGCTAAGGATGTTGAGTGCTCAGAATTTCTCTTTACCATAGAGTCACAGGGCCTGCTGGGCCACCTCTGCTTCTTTGTGGCCTGAGCTAGAGTGAGTGGAAATGCCAAATTACAATCACAAATCCATGTTCAATGTCATCTTGCACTCACTGAGTGTCATGGACTCCCAGACTGTCTTCACCAACCCTGTTGAGGACCCCAGACCTAGGGAAAGAAGGAACAAGAAGCCAGAGAGTCTAAGACTGGAGTGTGAGAGGGAGGATTCGGTGGTGCCCAGGTTGTAGAAAGAGGGCATGTTTGGGTGTGTGTCCAGCAGCTATGCTGGTGATAGGTCCATATGAATTCTAAGGCCAAGGAGATCATAACAAAGTGACCACCCTGTGAATAGCGCACCGGCCACATAAGCATGAGGGCCTGGGTTTGGATCCCCAGAACCCGGAAAGCAAGATGCAGGTGGCACATATCTATAATCCCAGCATTCCTGTAGGGTGGAAGACTGAGACAGGAGAATCCCTCAGAAGTTCTGAGGCCAGTTAGTCAGTAGGCGAGGACCACAGACCCCATGTGCAACAAGACAGAAGGAGAGGACCAACACTGGGAAGAGAGAAATCGGGAGGCAGCTGCAGGGATGGGGTCCTAGTTTTTTGATGTATCTGTGAGCATGTATTCTCCAGGAGCTGCAAGGAAGGGTTAGGCCCAGTGACGATGCAGAGGAAGAAGGAAGGTGAAGGGCAGAGGCCTGGAGAAGCTCCACACTGGTCCAGCCATTTCCCTTATGTGCTCTACTTTGAGAGCTCAGCTGGTCTTAGCTGGAGGTTTATTAAAGAGCACACAGCTGCCTCTACCCGGTTCTACATTCAGTCGTGTTGGGCACCTCTGGAAAGCCACATTTCTAACCAGCTTCCAACTGAGGCTGACACATGGGCCCTCTCGGCAGTTGCAGCGTTCTTCCTATGCACACTGGGACTTGGCTATGGAGCACACACCTCCCAAAGTGCCCATGGCAGGAAAAGATGGGTGGGCAGAGGAGGGAGGAAACACGAAGGAGGATTAGCCGGAGTGAGCATGACCTCCAGTCATGCGCCCCTCCCGGAGAGCCTTGACCTTCCAAGGACCCCTTTGAGTGGCTCCAGTGAACCTTATGGAAGCCTGAGTTCTGGCCTGAGAGACAGAGGAGGGGCATGCAAGCAGTGTGTGCAGCCAAGAGCAGCGACGGAGCCTGAGAACTCACAGTCCACCTCTCCAACTCGCTCTTGGCGTCCAAGGAGATGAGAACTATGGGCTCTCAGAAAGAATACAGTCCTGCCAAAGAAAGGAAGCCAGCTCATGGGGTCCAGGGCACTTGGACGCTGTGCGCTCAGCCCTGTTTGGCAGACAGCAGGGCTAAGAGAAAGTTCAGCTTGGCAGACGGACCATGCGCGCTCACCCCCAATCCCAACACAGGCTGGCTCTCCCCTAAGAGGAAAGGCAGGGCAGGGGGATACACTCTGATCCTTGCTGCTCCCCCCTTCCCATCAAGTTCTTGAACACAATTATTGAGCACCCCCTGAATACCTGATGCTGTCCTAGATGTAGCAATGAATTGAGCAAGACTGCATCCCTGGCTTCATGTAACTGACATTCTGGAGAGTAAGAGAGATAAAAGGAGATGCTTAGCGCAATCCGAGGGAATGCTAAGTGTGTGCCACCAACAAACCGACTCAAGGGAGTAAGCCATGTGAGTGGGGAGAGGGTTCTGGAGAAAGTACCGGGGTATAGCATGGTCAAAGGCCCTAAGGTGGGAGTGTGCGTGTATAGGAGGGAAGTGTGGAGGTGTGGCCTCTGGAGTAGAATGACAGATAGAAGGAAGGATGAAAGGAGAGGTGGGCTAGCTATGGAGGACACTACAAGTCAGTATTTTCAGCTTTTCTTGTGAGATGGGAACCCAGAGTTAACACAGAGCAAAGGAGGGCTTGCCTAGTTTCAATGGGATCCTCTGACTACACAGTTGTGGGGGGCGGGGGGAGGCACCACTGTTTGGAACAAGAATAAAGAGGCCAGTGAGGGAGACCTAGGAAAGGGGATCAGTGGCCTGACGTAGTAGGTTCTCAGTCAGGTAAACACTTCTCACTGCTGATCTGTATTCTGCCATAGAGCTTCATGGGAAGGCGCCACAGGAGGAGCCGCCATTTCACCACAGCCCTCTGTCTCCCTACAG
Seq C2 exon
CTGGAGCAGTCCATCCAGATGAACTTGAGGTCAGACCTGGCTCAGGCCCAACAGCACACAATCCAGAACCAGACGACCACCATGCTGGCACTGGGCGCCAACCTCATGAACCAGACCATGGCTCAGACCCACAAGCTGACTGCTGTGGAGGCACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000005008:ENSRNOT00000006786:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.387 A=NA C2=0.615
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]