RnoINT0017353 @ rn6
Intron Retention
Gene
ENSRNOG00000018241 | Ank1
Description
ankyrin 1 [Source:RGD Symbol;Acc:1309620]
Coordinates
chr16:73802933-73820829:-
Coord C1 exon
chr16:73820728-73820829
Coord A exon
chr16:73803038-73820727
Coord C2 exon
chr16:73802933-73803037
Length
17690 bp
Sequences
Splice sites
5' ss Seq
CAGGTCAGT
5' ss Score
8.94
3' ss Seq
TCTCTCTCTCCTCCTCTCAGAAC
3' ss Score
11.36
Exon sequences
Seq C1 exon
GCCGATGCTGCTACCAGCTTTTTGCGGGCGGCACGCTCAGGAAACCTGGACAAGGCTTTGGATCACCTACGCAATGGAGTGGACATTAACACCTGTAACCAG
Seq A exon
GTCAGTGGGTGGAGACGACGTATCCTCTTGGATGTCGCAGAGCTTCGGAACATGCTCTCCTGCACTCTTCTCAGTGCCCCCCAGTGTCTCTGGGGCTTCTGCTGAGGCTCACCATGTGTTAATACCCTTCTGGCCCAGGTCCCATAGACAGAAAGGCCACCTTGCTCTTGCAGTGGGACCCGGGCTCAGGCCTGGTCAATGCAGCCCCTCCCTTGGAAGTCACTGTGTATCCTGTTGTTGACTTAGAAACCACTTTTGTAAATGAGCCCTAAACCAATGCTGGAGCAATGGCATAAATCCCCTTACCCGTCAGCAGTCTTTTGGGTTCCTGGGCATGAGTGGTGCAGGAGACAACCTTCTGCCTTCAACATCTAGGAACTCGACCACTCCCGGGATCTCCTACGAGTGGAATCCATAGTGTTTGTCCTGCTGGGAATGCCTTCTTCCCTTTAGGATGATGTCCTCATATTTAATGTGGTAGGAGTTTGCTTGGCATCCCCAACAACGGCGACAAACTCCCAGAATGCAAATGGCCACCTGCCTCTGTGCTCTAGTGGCCTCTCCCACCCCTCCAGGCCCAGTGGAAATGATACAACACAACACAACCTTCCCCTTCCCAGGGCCAAGTTGGTCTTGTATGAGCTTCAGCTCACAGCTAAGAAGGTAAGACAGATGATAGATGTAGGGTATGATGTGACTGTGCCCATGGCAGTGGGCTGGGGGTGGTGGCAGTAAAGGTGTGAGCTGGACTTGAGCTAATGAGTAGGATGAGGAAAAAGGAAACTGTCCTCTCCCATAGTCATCCCTCACCCAGAAAGACACGCAGCCATGCACACCCAGACCCTGAACACTCAGGGGTTGAACTAGATGTCCCATGTGGATGGAGGAGAGGTTGGCCAGGGTGCTAATGCAATGCTTTGGGCAAGGAAACATGGACGAGGCCTGGGGACAAGGAGGAAGTCTTGGTTGCCAGGTCTGAGAGAAAACCAGACATCCTCCAGGCCACAGCCCAGAGCCTATCTCTGTGCTGAGTGAGCGGCCACAAACCCCAAGGGTCCCAAGATTCTTTGTGTCCTAGCTGCCATGCAACTTCCAGTAGTACCAGGGCCCTAGGGAGGCCTTTCCGGGATGAATCTTCCAGCCTTAAAGGAACCCCTGAGCTGAAATGGGACAGCTGAGTGCCAGAGGCTGCATCTGGCTAGCTGTGGCAATGGAGGGTTTGGAGGCATCAAGGGATGACTTCATCTGAGGGCCTCCTGAGGAGGCAGCTGCAATTCCCAGCCTTCCGCCTTTACCTGGCTTGCTGTAGGTTTCAGGAGATGAAAGCAAGAGGTAGGTGGGCAACTTTGGGGCTTTATTGACACCTTTTCTCTTGGGCTCCTGCCAATGCAGAGCCTATATGCCAGTGCAGAAGGGGCCCTGCTTTAGGTTTCAGACTCCAGACCCGGCTGCCACACCAAGGCAATGAGAGGTACCGAGATAGTCCACCACCACGCAAAGCTCACTGTGACACATACTTGCTGCTTGTGGTTAAACACAGACTTTGGTCTTCCAGTCAGGGGCTGAGGATGGCAGTAAGACACCCAGGCTTCACCTTGTGTGAACATAACCAAAAAAGTACTCTGGGGGCAGGAGTCACATGAGTTTGCCAAAAGAGGATAATTACGCTAGGTCTTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGTTTACTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAAACACGTGGTGGCTCACAACCATCTATAATTAGATCTGGTGCCCTCCTCAAGCTTGTATGCGTACACGCAGACACAATGCTCTAAACGTAATAAAAATTACTCTAGGTATGTTTGTTGATCATTCAGTTCCCAGATAAAAGACACACAACTTTTATCATTTACAGTAAGGCTTAAACAGCACAAGAGCTAGGCCCATATCCTGTATGCTATTAGAATCTATTTTCCTATGGATAACCCTGAGTTCTTACTCACTATGTTTCATCTGGGCTGCTCTTAACTCCAATCGGCCAGCCCTCAGGGCCATGTTTGCATGACTCATGGCGAATTTCTCTTCCTCTTCTATCTTCTCCTCCTCATGGACTTCCTCCGACCCCCCAAGTCCGGGAACCCTGAACCCACCTACGTCTCTTCTGCCCAGCTATTGGCTGTCAGCATCTTTATTTACCAATCAGAAATAAGTTGGAACCAAGGTCATGTAGCTCACTTGGGTCTACGTGCAGACTCTCTTGTCTCTGAGGCAACCAGGTCTGGGGGCCTGCACTCAGCATTACAATACACAGCCAAAGACCAAACCTCAACGCTTGCACGTGAAGGAGATGAGCCATGTGAGAGCCAAGAATGCCCAGGTCAGAGTAGATGTCTTGGTCACCATTCTTCTGCTTACAGAAGATACTCATGGGGCTGGGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTTTGAAAAAAAGAAGATACTCACACCAGGGTGCCCATGTATCCACACAGCACCAATGTCTCCATAACTCCTGCCTTGTCACTTATTCCAACATCATCATCATCATCGGGTCTTTAGCTCCACCCCCACATCCCCTGTCGTCCTGTGTACAGGGACGTAGGCTAATCCTGGTCCTTTAGCCCTGTGGGCAGGAAGAGCTGATAACCAAATAATGACATACAGCTAAGGCCATGAACGAAGGGTGTAGGACAGAGGTTCTCAACCCGCGGGTTGCAAACCCATTTGTGTGTCCAATGACCCTATCATAGGGGTCACCTAAGACCATCAGAAAACACAGATGTTTGCATTGTGAGCCACAACAGCAGCAAAGTTACAGCTATGAAGTTTAGCCATGAAAATAATTTTATGGTTGGAGGTCGCCGTAGACGAGGGACTGTATTAAAGGGTCACAGTACTGGGACGGTTTAGAACCACTGACGTAGGATACCCTGAGTGGAATATAGTAGATAGGAGTCTGTGGTGGTTTGTATTTGGTTGGCCCAGGGAGCGGCACTATTGGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCTCGTTGGAGGAAGTGAGTCACTGTGGAGGTGTGCTTTGAAGCTCCGCCCAGTGCAGAAGAGTCAGTCTACTGGATGCAGTCAGATAGAGATACAGAGCTCCTCCTGCACCATGCCTGCCTGGATGCTGCCATGCTCCTGCCACGACGACAGTGGACTGAACCTTTGAGCCTGCAAGCCAGCCCCAATTAAATGTTGTCCTTATAAGGGTTGCCTTGGTCATGGGGTCTGTTCACAGCTGTAAAACCCAAACTAAGACAGAACCTGATCTAGAGTTAGAGGTCAGAGGTCAGAGGTCAAAGACACCCTAAGCAAAAGACAGGAACTGAGAGCTGAGCTGAGGTTAACGAAGGGACAGCCAGCATGGTTGAGTATAGACAGGCAGGGACCCAGTTGAGGTAAAACTGGACAGAGCTGCCTCTTACCAGCGACAAGAGCTTGACATTACATAGCTGCACAGCGCACTCTGGGGCATGATCAGGGTATGCACATGTATACATTATGTATGTGCACCTATCTGCTGCCCCAGACTTTAACTCTGAAGTTGATGGCTGAGGGGATGGATTTGAGAGGAAAGGAGGCATCTCAGTAGTGAGCAACCCACACAACTGTGTTCGTGCATGTGGGCTGACTGGCTCTCCTGCTTGCAGATGCAGCCACATTAAGGATTTCGATCTTTATACTGAAAGCAAAGGAAAACAAGCCTGGGGTTCTAGCATAAGGTACAGTCACCGGAGGTGCGACTTAAAGGCTCACACTGGCTACTGTACTCAAAACAGATGGCCGCGGCGGTAGGAGGGCTGGTCATGAGACCGCAGCGGCAGTCCAGAAGAATATCGTCGGTAACTTGGATAAAAGTCATGGCTGAGGGGAAGAAACAGAGCCACTAAGACTGGCTTGTGAACAGGAATGGGCAGAAAGGCTTCCTGGATGACCCTGGGGTTCTGGTCTAGGAGAGTGGAGCTATCCATGTATTCTGGAAGCACACAGTGTGTGCATGGTGAAGCCACCAACTGAGTAGTGTAAGGACAGAGGACAGTGGGGATAGACGGATGGCAGCAGGGGCTTTTGAGGCTGGAACTCAGACAGGAAGGGAAGGTGGCCTGAGATAGGTCCCTCACAAGTAACTCATTCTAGCACCATGAAAAGAGAGATGAGACAGTCAGTGTAAAGCCACACCGTAGAGTCATTATGTACGTGTTTATGAAGCAGCTACTGTGTGCCAGGTTCCATTCTAGATACTGTACGCACACGACAGAGGACACAGGTTGAGTATTATATGCTAACAAAGGGAAGACGCAAAAGGCAGGAAAGGTAATCAACACCCCCATCAGATGATTGGTACCTAGCAGGTTAAGCCTGCTTTAGATGTGTGAAAGAGATAACTTTTGGGAGGCCTGGACAAAGGAAGGGAGAGAGAGACTGGTGGTTTTGGGGAATAGGAAGAGTGTGAAGAACCCCAGGTTTGGGAGCAGCAAGGACAAGGTGGCTGGGAAGCATTGGTCTGGGGTGAGCATACTCCTGCCAGTCCCAACTTCGTATACCCAGCTCTGGTGTCATCTAGAAATTGTGTGTAGAATCAAATGTCATAGCACGGAGGCTACGGTGATTGAAAATAGACCATGTTGGATGAGCAGATTGGCTTCTCACACTGCCAGCCAGCCACACGAAAGGAAGTAAGCTGCAGGGACAACCCGTGCTAGTCACCAGAGACGTCAGGTTATCATGGTACCTACCGCCGGGGTCATGCGCTGGAACTGAGGCAGCAAAGGGCCTCTTGGGCAGCCACTGTGCAATCCCAGTGCTGAGCATTTATGATGGCCATGCACTCTTGTACTAGACATGGGGCAAGCCGAGACCAGCCCTCAAAGAACTGAGGCAGGAAGCCTGCCCGATTCTGGGAGAGCACAGATGAAGCATTCTCCTGGCCACATAGGAGCTGTTGTGGTGAGCCCTGTGGGCCAGTGACAGGTGAGCCCCACATCACATCTTCTATTGCTCAGAAACAAGGACCCACAGAGGAGTGCCGGGCTCCCAGTGGCATCCTGGGGCACACAAGCAGGAGGGCGAGGAGGGCATCCTTCAAGCTCGGAAGGCTGACTCCAGATCATTATAGATGGGCCTGTGACTGTCTTGTGTTGCCTGTTGTTTTAGGCCTCCTGGCAACATAGAATAACATTAAACCATGTGGTTCCAGATTCTGCCTGTGCCCCACAATCAGAAGTCTTGCTGTCTGGCTACAGCTGTGGGCGGGGATGACAGGGAGAGAGGCTGTACCATTCCACACCTGGTACTACGAGAGTGTGGCTTTCGTCAAAGAAAGAGAAGAAGGCCACCCGAGGCCAGTGCTCTGGAGCCTGCTGGAGCCTCTGTCAAGAGTCTGTCAAGAGTCTGGGTTATTTTTAAAAGGGAAATAGTGTTTTGGGCTTAGCTCCCTTTGATGTTCATCGTGCTAATTACGAGGGCCAATGGACAGTTGAAAAGGAGGGTGGTCTTTGCTGCATGGAGGGCTATGTCCCCCTTTCCTCATCACGGATGCTTCAAGCCCTTCCCCGATCTGGCCACTTTGAATGCTACTTCTGCTTGCAAGGTGACCAGAACAGGTACAGGACAAACAAAGCTGAGGGCATCAGAGTCTTCCAGATAAAGCTCTAGCAATGCCAGATATCCAAAACACCAAACCAGAGGTCAAGACTACTTAGACCAATCTCCCTGCATCTGGTTCCCTCCTTCCCTCCCTCCCTCCCTCTCTCCCTTCATCCCCCTCTTTCTAGTGAAGGAAAAGGAAGGGTAATCATCTAGTTCCAGTTCATAAATGCTTTCATGTGTAGCCAGTCGAGCCACATTCCAGAGGCTAGGAAAGGGCGGACTAGCGCCATTGGGTGTGTAGAGTGTGTGCATTAGCGACTAGCATGCTCTAGCACTAACCAGTGACCATGAGAAAAAAGAACACAGGGTCATCAACAAGTGCTCATATTATACACATCAGGGAATAACTCAGAGCCACCAACAATTTATCAGTGTCTCATTAATGAAAAGACATAACGCACTTCTCCTTGGAGCCCGTTGGCCAAGGGCAAGTCCAGATTTGAATTCTCTACTTCATGCTTCCTGTGTTTTCCCTCCCTCTGTCTGTCTGGACTACGTCTGAATATGCGCCTGCTTGAAGGCTGTCTTGTGGATCTGTTTGTCCTTGTGTTGTCTGTGCCTTTCTGTGTAAGTTTCTGTGTCTGTCTAGTGTGTGAGCTGTGCGTGTCTGTCCCATTTTTATTAAACAGCAGAGGGCATCCCAAGGGGAAGGAAGGGGACACTTTACAAAAATCCTTAAGAGACTTTTACACGGGATTAAGTCACTGGCCCCAGCTGATCCCAAATGACTGAGACAATAAACATCGATTCATCAACCCTTGCTCATAACTGGCTGCTCTCAAGCTTTATGGGAGATTAGAGGAAGCTGCTCTCAACTTCTGTGTTTGCTGCTCTCAGAGCCTGCATTATTCCGGGTCGGGAGCATGGCAGAATACATAGCTCATGATCATGCTATCTGTTACCTACCTTATAGAAGCTGATCACACGAGAAATCCAAGTCTGAGCACACAGTAGGACAGCAGTCTTAAGTGACTTCAAGGTGTATCGTTGACTCTGGCAGTGGGGTCCAGCAAAAGTTCTAGTCTCTTAGAACGCAAGAGACATTTTCATCACATTGCATCGCCAAGGTCAGGAAGGGAAGCAAACCGTCCAGTTCCACACTGTGCTTTGATGGCTGTTGAGTTCACGATATGAAGACGAGGCATAAATCTCTTACTCGAGAGAAGTTTCAGAAAGAAGAGGGGCTGCATCCATGTCAGGGTGCATGGATATTCATTCATTTCCTCGGGAAATGCTTCACTTGCCCAGCCAAGCTAGGACTTGCTTACGCATGAGATCAGGACCTCAGGACAGCCAGGCTTCGGGGGCACAAAGGCTGGAGGAAAGAGGTGCACAGTTGTAAGTGATGGGGCCCTTAGATTATTCGTTACCATTCCATTGCTGTGATGGACCAAGGCTCCTGTGAAAGGGGGCATTTAACTGGAAGCTTGACCATCATGGTGGGGAATGTAGGGGCAGACAGGCGGGGCACTGGGGCAATAGCTGAGAGCTTACCTCTGATCTGCAAGTTGTAGACAGAGAGAGTGGCACGGGGCTGGCATGGGTGTTTGAAACCTTAAATCCCACCCCCCAATGACACACTTCCTGACAGTCCCACTAAGTGGGGACCAGCCATTCAAGCGTATGAGCTTACGGCAGCCGTTCTCACTCAAACCACCATGGAGAGTGTTTCTAAGTTCCCTGGGAACGAGTTTAAAAGTAGGGCATGGACATGATCGAGAGTCATATTGCCTTGCTAAGAACAATTACCAGCTCTCAACTCCAGCCTCGAGCAGACTGACCCCTCTGATTGGTGGTGGAGACCTAAATGGAGAACTGCCCTGACTGAGATAGACTGTGGATATGACTTAGTCTGGAATCTTTTTTTTTTAGACTTACTTATTTATTATATACTTATTTATTATATATAAGTATGCTGTAGCTGTCTCTAGACACACCAGAAGAGGACATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTAACCTGGAATTCTTTTTTTTTTTCCGGAGCTGGGGACCGAACCCAGGGCCTCGCGCATGCTAGGCAAGCGCTCTACCACTGAGCTACTAACCTGGAATTCTTAATACTTGGTGGCGAACTTGATCCTTTCTTCATTGTTCACAGGCATGCCTCTCCATCCGTAAACTGGCCAGGCTGAGCCCTGCTCAGCTTTTGACCTAGGACATGTTCAGGTGGTACGGTCGTAGGCTGCATAGAAGCATGTCTCCGATTTTAGTTTCGGTTTTTACAATTTTTTTTTTTTGGTTCTTTTTTTTCCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCCGGTTTTTACAATTTAACAGCACGATGGATGCACACTTTGCTTACAAACCAAAACTGTACAGAGAGGCACAGCATCTGAAAGTCTCCCCTCCCCCGCCGTGTGCACCACTGTTGGCAGTGTGGTAGGAAGACCGTCACACTTTTCCAAAGTGTTTCCTGCGGATGTCGATTGCTCAGTTCCTATACCGGGATGATAGGCAGGTCACCATTTTCGAGATGTGCACTACTGGGATAGAGAGATGAATGGTAAGACCGGACTTTCCCCTCTAATCCTACTGCCCTTCCTCGGGAGGTCTGGTTCTCTTGATTTTTTAAAAAAAGGAATCTCAAGATCTCGGACGTGGAATCTTTCTAGTACATGGGAGATATTCTTAGCCCGCTGAGCTCAATTCCAGAGCCCGTTCTCTCATTAACTTGAACTCGAACGTCCTCCCCCTCCACTCCCGAGGGCCCTGAAACCTCAGCGGTGGGTTTGTTGCTGAGCTGTGGGATTTTGGAGCACGGAGGCCAGTGCGAGCTTTTGAGCAGCCACACAGCAGAGGGAAGGTGATCGGAGGTCGATTGGCCTCCGGGCTGAGAGACTGCTGCAGTCCGTTTTAGCTTTAAGATAATGAAACAGATGACAGCCCCTGCCGCCCCTCCTCCTGAGTATGACTAAATCGTGATCCTTAAGAGCTACCTGGGAAGGAAACTGGATTTAGATTGTAATAAGGCGAAGAAGGGAGAATGCTCGGAACCAGCTCGTTCCTGTCGCTCTGCCTCCCTCTCTCCGTTGGTACAGTCCTCCTGGATCCCTCCACTCCTCAACTGTCCCTCTCTCTAGAGGAATGCAGGCTTTACAGAGGAGGGAAGGATAACCCCCTCCCAACCCTGACAGTTGTTCAGCTCCATCTGCCTCCTGAGTCATTAAATGGCAGGATGGAATATTTTTAACAGACTCTCCCCACCAAGTGGTCTCTGCAGAGGCATAAACCCTCTAAAGTAGAAAAGATGGCAGGCGGCAGGCCCTTATCAGCAGGCATCCGTGTGAGGTCGAGCCTGTTCCCTTGGCATGATTCGATGGCACGCAGGGCAGGTTATATACTTACCGGAGAGCACCAGAACCCTGCTCCAGGCTGCTCTTCACGGGTCCTGCAGACAGACTGGGTGGGTGAGGTCGCCCACTAGGGCACCACTCCTTCCGCTAGGGCTTTGCAGAAAACCTAGCTTAGCCCCAGTCCATTAATCAGAACTTAGAGCTGCCTCCTTCACACTTTCTAAACCTTTGCCTCCATTCCTCCCTCCTGTCTTCTTTCAAGCTGCAATTGTTTCATATCGACAGAGACTGTACTGTAAGGACAGTGCAAAGGACCCCCGCTTCCCCTCTGCTTGCTTTCTGACTGCTTTCCCCTGCCTTCCTATCTGTTGACCTTCCTACCCATCTATGACATTCTGTTGTCTCTAGACGTTCCAGTCTGTACAAGGCACGAGTAAGAGACCACCCACCTGGCTCCCATGTGTGTCCAAGGCAACATTTTACCGAGAGTCCACCTGCCCCTCTGCATACCCTCCCTTCCCTTCTGTTGGTCTCTCCTCTCTCCCGCCCCACCTTCTCACCCTCCCTTCTTGTTCCTAGGTGTACGCTTGGCCTTAGGTGACAGGAACGCCTGGGGTGGAGCAGCTCCTCCTGCTTTGCCTGCCTCACTCTTTTAACCCTGCTCCAGTCAGTGGTTTGAACCTCAGTGATGGTCGTCTGGTTAAAAATCCAAGTTGTGATGAGGGGTATCCCTTACTCGACTTCATGGTGTCTTTGTCATCCAGTTCAGGCTTCCCTCACTTCCTGCCTCAGTCACCCCAGGTTCACCCTGAGTTCCCTGTGTTCTCACTGGCTCCCCCGACCAGTGGCCGCTGTGCTGGTCACTTCCCAGATGGTCCTTGGCTTCTACTCTGATCGGTGGAAATTAGATACTCCCCTTCCCACTGCTGCACCTCTGGCCCTCATTCTCAGCCAAGACCTGCAAAGGTGAAGGGGATTCTAAACAGAAACCGAAGTGCATAAGCTCCGTGGCGTCATCCCGACCACATCAGGAGTACAATTGCTACCTGATTCCTCCTTTTTGTTGTTGCTTTGTGTCCTGGATAGTTTTGCGTCTTCTTAAAACCGGTACGGTCATTTTGAAAGAGGGATGCTCTGTTGAGTTCTTGCCCTGACTTCCTTCAGTGATGAACAGTGATGTGTAGGTATAAAGCTCATAAACCCTTTCCTCCCCAAGTTGCTTTTGGTCACGGTGTTTCAGCACAGCAATAGTGACCATAATCAAGACAAACTTTGAGGTGGGAGCTGTGGGCCATTGGTCAGAGGACGACATCTGAGGCTCTGTGCTCCTCGACGGGGTGAAATGAGCGAACAGGAGGCATGAGGGCCGAGTGTTCTGGAACCATCAGCATCAGCCTCTGAGGTATCCCTTCCACTCCCCGTGAGCTGTGGAACCTCGGGACACCAGGTGCTTACTGCCTGAAGCCTCCCTTCTGCTCCTGACTGGATAAGTGCTAAGTTTCTGGTGACATGTCAACTGTATTTGTACATTTGGAAGTCAATTAGTGTAATTGGGGCAATCAGAGCAGCTAAACAGAGGAACAGTTTACTGAGAACAAATGTCAGGAATCATGTTCCTGCCAATGGAATCCCTCCCTCACAGTTGGTACAAGAAAATACTCCAAGTTAAGTCATGCGGGCAGAATGTGACTTGAGAATATCTTAAGAACCGTTGGGAGCAGCTGCACACAGGCTCACTGGACGTTCCTCCTCCACCAGACACTGCTTCTCAGAAGAGTGATCTAAAGTGAACATTTTTACTCAAATGGGGGGGGGGTCCAAGGAGACAAGAAGAAAGCTGCTGTGAAGATACTGTGAACATTTGTGCCCTTCAAAGAGACCATCTCTTCAAGGTCATTGTGTCAGGAAAATGTATGAAGTCCCGGGGTCTTGAAGACTCCAGACAAGAAGTGTGTGTGTGTGGGGGGGGGGGTGGAAGCTTCAGAAGGCATTGTTTTTGCCCTAATTGTGTGGAAACAGAACAGATAACCCACAATATTACAAATCCTCTTGAAATCAGCTGAGAGCCAAGGGAGTAACAGCAGCTAAGTAACCTGGATTCCAGAGAGGAATCCATAGGCACCATCTCCACTTAGAGAACATGCAGAAGCAGTTACCCCTGCAAGGCAAAACCCTGACAACTCTTAGAGGTCACAGTGTCTACAGCAAACTGTTAACACCATGCCTTAACTGAGTGCTCATGGGAAATACTGGATACCACAGAGAAGCCCCCTAGGCCTTGAGTGTTCTGTGTGATTAGTGGAAGGCGGCAGAGGAAGAGACTTGCAGGTTCCCAGGAATCCTCTATTGATTCCAAACGGACCTGCCCCCACACTCCAGATTGCATATAGACGCCGTTCTTCCGAGGAGGAGTAGAAGCCGACTGCTTCTGCCGAGGGACAGAGGCTTACTTGTGTCAGCTTGGTTTGCATCAGCACCTCTGCATATCCTGTGATCCTGGGGAGGCCAGCAACTGTCCTAGGTCCAGGTTTCCTGCCCCAGTAACAAGCAGGTCTCTCCCTCTGCTAGAGGATATAAGGACATGCGAGGAATACCCATTCAGGCCCAGGACAGACAAGGCAAATAAAGGACCCTACCCTTGAGGTGCAGACACACAGAGCCTGTCTAAGACTGAAGCTGGACCATAATGGAATTTGCTTACCACTACCAGTCTGTGTCACCAGGAAGAACACATTGTCACCAGGAGAGAAGCAAGACAGAGAAATAAGTTCACCTGAGGCATAGGTACCTAGAAGAGTTGGAAGCTGGGAGATCAGGAACACTGAAACACTTCTGGGACCCTAACCCCTACATCAAACTCATGATGACTGCAGCCTCCTTTGAGAGGAGTGTGGAGGCTGACAGACCAAATATAATAAGACTCAAACCCAGGTAAGCTCCTGTTTTGATCAGGGTTCCGTTGCCTTGAAGGTACACCTTGACCAAGTCAACTCTCACAAAGGAAAGCATTGAATTCAGGCTGGCTTACAGTTTCACACATTTAGCCCATTATTATCATGGCAGGAGACATGGCAACATCCAAACAGACATAGTACTGAAGAAGAAGCTAAGAGTTCTACATCTTATTCTGCAGCTGGAAGGAGGAGAGTGGCTCACACTGGGCCTTGATTGATCACAGAGACCTCAAAGCCCACCCCCACAGTGGCACACTTCCTTCGACGAGGCCACGCCCACTCCAACAAGGGCATAGCTCCTAATAGTGCCACTCCCCATGAGCCAAGCATTCAAACACATGAGCCCATGGGGGCCACGCACATTCAAACCACCATAGCACCTAACTCCCACCTACCAAGGCACAGATGAACCAAATCTGTTTCCAGCCAGAAATGATAGATAAGTGCTTCCATGTCCCCTGCTCTTATGCATGGCACCTGTAGCCAATTAATAATCGTTAACGTAACACACACTTAGGACGAAACGCAAACCAACCGTGGTCAAGAGACAAAGCAGTCAACAGGAGCAGACTCAGAGAAGACCAAGATGACTGACATGTAAAAGAATTCAGTAGAGACACGAGTGGCACGCTCCAACTGACGGAGAATCTTGGCGTAGAGATGGAAAACCCAAGGAAGAGTCTAATGCAGTACAGCGATAAGAAATTGTCAGACAAAGGCACGGTGAGACCGAGAACTTAAAATAGATCAGGAGAAAATATTCAAGTCAGAACAAAAGAACGCAGAAGGAAAAGAATACAGCAGAGAGGCTAAGGGTGTGCCGGGTGGTCTTTTCCGTGGGTCATGGTCTACTGCAGGGGGTCTGTGGGAAGGGGATAGCAAGGTCCTTCAGGACAGCACAAACAGACAATGGGCACGAGTAGCTACTGCGCCTGGCTGAGCTGAAGCCTCTTCTCTGGAGTCTCTTGAACTCCTTTGGGCTCATCTTCGACACTCTGCTATTTGAGAGAAGAAACATGTCATTTATCGCACTCCCAGTCCCCTCAGCAGCCTGTCTGCTGTTTGGCTTCAAGAGAAAGAGACTGTGAAGGTTGGACGAGTCGCTTCAGCTATCAAGAGGGATCCAGCAGGCTGCCTCTTACTTTTGGCAACCGCCCTCCATTTGATTTAACTGAAGGAAAAGCTTATGGTTGCTGGCTATGAAGAGGTGGTAAAATTACAGTTTATCGCTGTCCGTAGTCACAGCTAAGAATAAATAGTTCACATAATCCTGACGCCTTTCCCCTCACGCTTGAGAGTTTTCAAAAATCTGTTCAAAGAGAAAGGAAGCGTTAAATTCAGCGTTCTTCCGTGGGCCACTCCTGTGTCTCTTGTGTAGACTAGCTTACACGTTTAGACACTGGTGCCCAGATGTCCCACGGTTTCATCTGCTAATCATCCCCCTGCTGAGGCTGGCTCCCGGAGAGGGCTTTACCTCAGGAAAGGAGAAGGACCCACAGTGAGAAGGGTCGGAGGCATGGCTTCTGACGTGTTTGTTTGCCCGTGGGTTGGGAACTTAGTGTCACGTGCAGTACCTTCAGTTTGCCGTGGTAAATGCACTTTTCACTCCAGTGTCGCACGAACTGGCTGGCTGGCTGTGAAAATCACTTCTTAAAGAGTAGTCCGTTCCCGCTCTGTGCTACTGATTCATACACGCCTGCAGGAACATTTAGGGCATTTGTCTTGTATGTATCTGTTCCTGCATCACCCACAGTGAGTTCTTCAAGAGAAAGTGTTTGTTTCTTAATCACCTACAGGGCACTGCCAGCTCTCTCGAGGTTCGGGAGTCGGGAGACACTCAGCAGTCTGTGGCAAAAGCAGCCGGCATCAGCACCTCTGTTTTTGCTGTCTAAGTCCAGAGTTCTTTGCTGGTTGGCTGTGCCTGACAGGGCTCAGGGGTAAGGACATTAAATTCAAATCACCAGAGTAAGGGATGTAACGGAAGCTTACAAAGACCGAGCGAGGGATGGGGAAATGGGCCAGCAGCCAACACATTTGGTATCCAAGCAATAGGACCCGAGTTCCGATCATCAGAATCCACACAGATGCTCCCCTAGCGTGGTGGCCTTTAAGCAGTTCCAGCCTCAGTCTCAAAAGGCAGAGGTAAGGGATGTTCCCCAGCAAGCTGCCTATGAGCCTAGTGATGTCTATGAGCTCTGGATTTGAATGAGAGACTCTGCCTCAAAAAATAAGATTGAAGAATGATTGAGGAAAGTTCCTGACATTAACCTCAGGCCTACACACACACACACACACACACACACACACACACACACACACGGACAAACTCATAAAGGAGAAAAGGATGGAGGAAACAATCTGGAAGGGAGGGTGAGACACTCTGGGATGCACACCCACGCACACCCTCTTGGAGGAAAAGCCACTGCTTTGGCCGGGAGTGGGCTTCCAGAAGGTTTGGAAACCAGAGAGTAAAAAAGGAGACTCTGGAAGACCAGGATAGTAAGTGAACCACAGAGATCAGTTGCGGAGGCCACAGAGGATGACTGTTGGGACTATAGTCAAAAGTAAACTATGCTTTTATGTATCTAATCAAACAGAAGCGAGTTAGCCCCTGAGAGGAGGGCGCTCAAGACCAGGCTGGTTTTCATGTGCTAACTTAACCACTCTCTGGTCTTGGTTTCCTAAGCTGGGAATGAGAGTCACAGAGCCTCTAACACACCTTGCCTCCAGCTCTCCTGGTCAGAAATCCAGCACCCCCATGGGTTAGGGTCCTCACCCTGCAGAACGGGAGAGCTCCCAGAGTGTTATTCTGTGTTAGATGTCCCCCCAAGGTTCATCAGCACTGCAGCTCCAAGGCTCGCAGGACAGTGTAGGTGGCAGTGCCACCAAGCCGAGCGCTAAACCAGCCACATCCCTGCTGGCACGGTTCCAGAACCATCTCCTGTGGTAAGCAGAGTGTAGCCACAACCACAACCACCAGACCCCGGGAGCTTGGAGCCCTCCAGAGTGGGGTTGGGAGACCTCTGTCTAAAGATCTTTGAGAGGACAAGCCCCTCGACAGTCCTATCCCACACAGAGAATCGGCCGAAGGAAGAGCTGCGGCCTCCCAAGCACAGCCTCACTTGCCAGGTGGTTCTGCAGTTAATTTACGCTCTACACACTGAATACAGACTGTGGGTTTGTGTGGGCCTGGTGTCCGTTACCCCTTCCCCTAACTGTTGCCTGCCTGCCTTCGACCCTTCTCTCCTGTCACCAGTACTAGCTGTAGCCATTCTTTGATCTGATAATTCGACTCACATGGTGGGATGAAAAAGCCACAGCGAGAGCTTTGGGCCCTGCACTTTGGGCCCCGCGCTAAGTCTTGTGCACAGCCTGCAAGAGAAAGACATGGATGGCCAGAGTCATGTTTCCATTAGAAAACTCTTAATAAAGTAACCTTCCCATTAACCCCACTCATCAGTACATGAGTGTCTTAGTTAGGGTTTTACTGCTGTAAAGAATAACCAAGGCAACTCTTATAAGGACATTTAACTGGGGGTAGCTTACCAGTTCAGAGGTTCAGTCCATTTATAATCAAGGTGGGAGCATGGCAGCATCCAGACAGGCATGGTGCAGGAGGAGCTGAGAGTTCTATATCTTTATCTGAAGGCTGTTAGAAGACTGGCTTCCAGGCAGCTAGGATGAGGGTCTTAAAGCCCATACCCACAGTGACACACCTACTCTAACAAGGCCACACCCACTCCAACATGACCACGCCTACTCCAAGAAGGCCACACCTCTTCATAGTGCCTCTCCCTGGGCCAAGTGTATGCAAACCATCACAATGTGCATGCAGAAGCACAATGCACACACACACACACACACACACACACACACACACACACACACACCTGGTAAGGAATGTCACAACCCTACAAGGACTTGGCCAACTGTCCTCACTGGCTGCTTATAGGCTAGGCAGGCCTGATCTAAATAGGACATAGGACATCGGATACAGCAACCTTCCTGTGTCCCCTGCCCTTCTTGTGTAATCCCTGAAGACTCTTTCCTGGGGTCACTGACCCTAATGGGAAGCCAAACATATGCTATGACCCAAGAAAGGAGTGGGGATTTCTGGAGTCCAGGGTACAGGGACTCTCCAGAGAAGTGAGTCACATCACAGGCAGAAGTCAAGCCTTATCCTGACTGGCAGGAGCCTGCTTTATGGAGCCTCCTCAGCCATGGACACTGAAATTCCTGCCATCATGTTGGCAGTATCACTTGTGGCGTTAGGTGGTACTTTTTAAAAATATATATATATTATTTGGGGGAAGGGACCCATGCATCCCATGAGCAAGTGTGGAGGGTAGAGGACAGCATTAAGGAGTCAGTTGTCCCCTTCCATCAGATGACTCAAACAGAGGTCATCATGTGTGATGACAAACGCCTTTACCCACCAGGCTTCCTCACCTGCCCCCAACGAGCAGGTTTTGGCATCGGATCTTGCCAGGAAGTTTCAGAGCCTTTAAGTACACAGGTCAGAGAACAGGAAGCAGGAAGTAAGGACTGAGCGATACATCCCGAGTCCAGCTGCCTTGCGGGGGACACAGTAGCAGCCTAAGACTGACAAGAGCTTCTCACAGCTTGGTGAGAGCCCTTATGGTTGGGCGTGGTGGCCCCTTTGGTGGCACCTGTACAGTGCTAGTGTTTTAGCACTGTTGTTGTTGTTGTTGTTGTTGTTGTTAACTGAGGAAACCATGAAGTGGAGTGGGGTACACAGTCCTCAGACGGTCTGTTTTGAAACATTTTGATAAGACGGTCCCCACAGATTTTGGGTGTGTATTGGTGTGGCGTCTCTACTCTTCCTAGTTCCTGCATGAAAGTTCGCCAGGGCTGGAGCCATGCCCATCATCTCAATCAAGGGGAATTCCTGTCAATCAAGTGGTCAGCTTTCTGCAACTCTGACAAAATACCTGGGAAAAATCAAGTTAATAAAACAAATAGGTTAATTTGGGCTCAGGATCTCAGTCCAAGTCCAGTTGGTCTCATTGTTCTGGGGCCTTTGGAGACCCGGCACATCTTGGGATGAGCTTGTGGTGGAAGAGGCTGCTGGGCTCTGGCAGCTAGGAAGGAAAACTAGAACCAGAACTGTCTCTTTAAGCCTTTATGTCTGTGCACGTGAACATTTCCAAACCCCAGTGAAGCCTAAAAATTGTCTAGGATCAAAATCTCAAGGTCCTGAGAGAGTGTCCCTGTCCTTGATTCATGTCTAGAGTGTGACAGTTTTATTGTCTTTGTTCCCTGATGTTTTGACCTTGGGATGCCTTCCTAGCTTCTGGTCAGTAGGTGGCTCTCTCCACATCAGCTCTACCCACCTGGTGTGCCTGTGTTTCTGCTTTCCCCTGCTGCAGACCTCACCCAGTCCTTAGGATGGCGGAGTGGGTAGTCTCACTAACAGAAACCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCTCTCAG
Seq C2 exon
AACGGGTTGAATGGCTTGCATCTGGCCTCCAAAGAAGGCCATGTGAAGATGGTGGTTGAACTTCTGCACAAAGAGATCATTCTAGAAACAACAACCAAGGTAAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000018241:ENSRNOT00000064070:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.229 A=NA C2=0.057
Domain overlap (PFAM):
C1:
PF127962=Ank_2=PU(28.7=79.4)
A:
NA
C2:
PF127962=Ank_2=FE(36.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]