RnoINT0068915 @ rn6
Intron Retention
Gene
ENSRNOG00000016659 | Habp2
Description
hyaluronan binding protein 2 [Source:RGD Symbol;Acc:1302979]
Coordinates
chr1:277080037-277093229:+
Coord C1 exon
chr1:277080037-277080073
Coord A exon
chr1:277080074-277093121
Coord C2 exon
chr1:277093122-277093229
Length
13048 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
CTTCTGCCTTTGTGTCTTAGATC
3' ss Score
10.24
Exon sequences
Seq C1 exon
CTCTCACTGATGCCATTCATTGCACCTCCAGACCCAG
Seq A exon
GTGAGTGTGGCCTCACCCCAGGCTTCCACCAGCCAAGGGCCAGAATATAGCAGCACTTACAGGGCCTTGGGACTCAGCTGGTTTCAGGGCATCCCGGAAACCCTTGAGAATTTACCCAGAAACACTGAGGCCATATAGCCCTCCACACAGCCTTGAGCTGCCAGTCTCTGCCACCTAAGGGAGAAACTACAGAGAAAGAAACCGAGGCCCAGATGAGGGAAGCAACTGGTTCCTTGTCCATTCGTGACTGGAGAGAGAAAGAATGTGGCCAAGCAATTCCCCACAGGGAAGCCAAGACACCAGACAGGTTGTTGCCCATCGAGGACCACCACCTCCACTACTGTACTTGGGCTTAGGGTTTCCAGAAACTCCATAGGAAGTCTCAGGTCGATAACAAGGCACACAGCACCGAGAGTCAGGTAGACCGGAGGTGGAAGCCATGTCCGGCATTGGCCTGGTGTTAGGATTGCATTCAACACTAGGCATGGTGGATGCACCTGTAGTCCCAACACCCGGGAAATGGAGGTGGGAGATCGGGAGTTCAAGAACGGCGTTAGCTTCATGGCAGGTTTGAAGATGGTAGACTACGAGAGACCCTGTCTCAAAACAAACAAACAAACAAACAACCACAGCCCCACAAAACGATTGCATCCAGGTAGATTGTAGAGTATCTGACATGCCCAGTGGACTGGCTGGTTCCTCACAGGCCCTGTCTCTCCTAGACTCACCCTGTCACCTTGAACCCTCTCTGTTTCTTCTGCCCAGTGACATACTACAGTGGACCAAACAGTATAACACCCTTCAGCCTGCTCTGAGTTTGGGGTAGAAACTCCTCACTATTCTAAGAGAGCAAAGGCAGACATCCCCACAGGTAAGGGACTGGGTTGGTCACGATCAAAAGACCAGAGCAGGCAGCCTGTGTTTGGAGAGGACAGATGTGATTCGAGCTTCCTTGGTGCAAATCCTGATCCACCATCAACCTTCTCCAGGACAGAGTGCTGGATGGGCAGAGAGACAGTGGCAGTTCAGAGCAGATGACCCAGACTTGCGCCCCATGTCCTCATGGGATAGAATAGAAGCATGTGTCCAGGTGAGCGTGGACCATAGAGGGACTCTGCATCTTTCCCCAGAGCAAAGCAGAAAGACGCAAAGGCTCAGAGGCCCCAATTTAGACTCCTGGCACTCATAGAGTTCAGAGAAGAGCCAAGGCCAAGGCTGGAAGGGCATCATTTCTCCAGCCTCGAGATCACCCTGCTCCAACATCAGCAAAGGGAGGTAGAAAGACCATAAGACATAGCTGTAGAAGCTATGGGGTGACAAGGAGAGAGACACAGGCATAGAAGTGTCAAAGCACCTCGGTTTCAGGTGTCCAGAGTGTCTTATGGTCCAGGAAGATAGCTCAGTGAGTAAAGTGCTCACCTTGAAGCATGAGGCACAGATTCAAAACCCACGAGAATGCTAGATGGACAGAGTGTCCCCTTGTCATTCTCACCTTGGAAGGTGGGAGCAGGGATCCCTGGAGCAGGCGGTTGGTGAGACTAGCTGTAACTCTGGGTTTGACTGAGAGACCCTACCTCAACAAGCAAAGTGGGAAACAATTTAGGATGATTCTTGATCACTCTGTCTTCCACATGCGCATGCACCCATGTGCATACATACATACACATGCCCACAGACGTGCAAAAATGCATGCACACGAGCACCACACACTAAACACACTATCACACACCACACACACACACACCACACACACAAATGTACCACATACACAAACATACCTCACTCATGTACCACACACACACATACTACACACACACAAACATACCTCACTCACATACCACACACACACACTACACACACACATGCTACATATAACACACACACTCACAAATATACCATACATACAAACATACTGAACACACACATACCACACAGAGACATACCATGCATATCACACACACACACACACACACACACACACACACAGGCCACACACACACATACCACACACAGACATGCCACACATATCACACACACACACACACCACACAGACATGCCACACATATCTCACACACACACACACCACACACAGACATGTCACACATATCACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACCACACACAGACATGCCACACATATCACACACACACACTCACCACACAGACATGCCACACATATCACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACCACACAGACATGCCACACATATCACACACACACACACACACACACACACACACACACACACACACACACATACAGGAAAAAGAAAGATTTAAGAAGTATCTTCACAAGGCACTCTACCACTGTCTTCCAGAATGTTGCACATGATGTTCTGGAATTAGGCAATGAGCTGATTGAAGAAAAGAGTGGGTTCATTCAGTGTGTCCATACGGCTCTAGTTGACTAGATTACAAAGCAAGGCATCATTTGGCCTACAGACAGACAGAATTTCCTAACATTAGACTATCTAAACTTTGAATGGACTCTTGGGAAGAAGGAGTGACCGCCCCAACACCAGAGGCATTTAAGACAAAGACTTAAGTTGGAAAACAACTTAGGGAAGAGTGAACAGCATGAGACTGAGCACACCAAGACACCGAACCCCTACAAGAGCGATACAGATAAGGTCTGAGAGTCAGGGAGCAATGGAAGCGGGTAGGCCCTGGCCAGGGCCTATCTCCAGATGGCCTCTGGCTGTGGACTGAGGACGTCAGATTTAAGGCATATCCTCACGTGGGGCTGTTCTTTGATGAGATTCATCAGCTCCAAGCTCCCCTCAGACAGCAGCATGCTGAAGAGACGCCCCTCTCAAGCCCTCAGGCAACCTGCTTCCTCAGTTGGTCTTACCAGTGCCAGGACATGGCAAGGGCCTTGCTGGAGCAGAAGGTGCCTGGTCCCCAGTCCCCGGTGTGTAGCAGAGGAGGTGACCATCAAACAGTACAAGCTCTGCCCATCTCCCTGAAGCAGGTGACACAGAGCCTGCAGGCCCGCGGAAATGCATCTTCAAAGCTGGCTTGGCTCTGCCCAGCACCACAGGCTGTGCCCATCCATCAGCTGTCCTGCTGCCTGCCAGCAAGGCGCTCAGCCGTAGTTGCCTGCCAGCACGACTGGAAATGTCACAGGCAGCCCGACAGGGCTGGGGTTTGGGGGGAGGCACCTCAGAGGAGCCAGCTGTGGCACAGTGATGGATGAAGCCACCCGGGATGACATTCCATGGATTTTTCATTCCATTCCACACATCTGGCAAACTCCTTTAGCAGAGCAGCTGTGGAGTTCCCACAGCACCAACCGCCAGCTCTTTCCAAGAGGCCCTCACCACGGACCACAGGAATCCTGGAAAGGGACGAGGGGCCTGTGCTAGCTGAAGACTTCCTGAGCAGGTCATCGTCTGAAAGCCAAAAGGCCAAAGGTTTTCTAACCTGAACTGCGCACGAGATGCCAGGTTCGTGAGAGGGCGCATGGGACTTGGAGTTAGATGAACCTGGATGTGGATGCCCTTCTGCCTCAGAGTTTTGAGCTGTAGAATGCAAATAATGATCACCTTCACCGAGGAGGTTGACAGTTACACAGCTTCGTAGAGTATCTGACACACAGAAAGTGTTGAATATTGAATATGCAGTAACCTACCATTAGAATTATTTGTGTTAATTTGGAATACCCCTAACACTTTTCACAGTTATTTCTACCGACCTAGACTTCCGTAAAGGAGCAGGCCGAACACAGATTTCTTTTTCATCAAAGAGGAACTCCAATAGTCACAGCTTCTTTTTTTCCCAAGGTCTCAGAAGTTCAGAGGAAGTCTCGGGGGTGCCGATCGAGTTTAAACCCCAAACAGGGAAAGGTCTATTGTATTAGAGGGACATGCATTCCGGGAGAACCTCACAAGGACAACCTCAGAGCACCAGTTCCTGAGACCACCACATCTCTATCACATCTCTCTACTCGAATCTGCGTCTCCCCTCTCGTCTCCTCTCTCTCCTCTCCTCTCTCTCCTCACACCCCACTCACATACACTTGCATGGCGCACACATGAGACATGTGACATGTACACATATGAACGACCAAAGTATGTATAAGGCATTGCACACACCATTGCAGTGGGCGGGAGTACAACAGCACGCCGATGATAAGACCAGGACACCGCCTGTCCTTGAGCACAGGTAATATTCATGAGCCACACATGCCAGGCGACCTGAATATAGACTTCTGAGATCTGAGAGATAGTCTGCTCACAGGTCCGCGGAACTTAAGCAGGGACAAGAGAGTTCCATTAGCAGTGGCCTCCAGCCAAAATGGACAACATATGCTCGAGGGGCCATAGAACATCTTAAACACAAACTATGGGAGGAAATAAAATTCGGAACAGATTCCAGAGACACACAAAATACCTGTGGGCAGTCAAAAACACTCATTTTCCCAATCCAGTAGCAGACACCCGGGAATCGTCATGGTCTATAGATCGGATTGATCCCAGCAGACACATCGTCCAAAGGACCCAGGTACCTGACCTATCTTTCGGGAAGATATGCCCGAAATCTTTTCCATTATTAATATAGGCAAACATTGAGATTATTGCGGGTTAACCCCAGGGACATCCAAGGAGAAAACACTAACAGTGGTCCATGATACCCTACCACAGAACTGGTATGACTCCCCACTTCAAGCTCAGCACACCTTGAAAGGCACATTTTCTAGTCTCGGTACTTCACATAATCGGCCTTTGAAGTCCCAGGGATAGATGGGAAGGTACCAAAAAAATCACAGGCCTCATTATAATAGACATCGCCTGTAGCAAAACAATAGTCAAGATTAAACCCCAAGCACATACAGTGGACACGTTAGATGGGCAAAAACACTTCGGNNNNNNNNNNNNNNNNNNNNNNNNNCCATGTGCTAGCTGAAGACTTCTCTGAGCAGGTCATCGCTGAAAGCCAAAGGCCAAAGGTTCTACCTGAACTGCGCCACGATGGATGCCCAGGTTCCAGTGAGAGGGCGCCATGGACTTGGAGTTAGATGAACCTGGATGTGGATGCCCTTCTGCCTCAGAGTTTGAGCTGTAGAATGCAAATAATGATCACCTTCACCGAGGGAGGTGGACAGTTACCACAGCTTCGTAGAGTATCTGGACCACACAGAAGTGCTTGGAATATTGAATATGCAGTAACCTATTTTTTTTTCCATTAGGGGGAATTCATTTGTGTTATTTGGACATACCCCTAACACTTTTCACAGTTATTTCGTACCTAGACTCCCGGTAAAGGAGCCCAGGCCACAAGGCAATTCTTTTTCAATGCATAGTGTGAAATGCTTCCAAGAGTCACACTTTCTTCCCAAGGTTCTCAGAGAGTTCAGAGGAAGTCTTCGGGCGGGCACTGCATCTGAGTCTTTAACGCCAGATCCAGTCGTTGTAGTGGGGTGCATGCATGTCGCTGTTGACGTGCAGAGGACACCTCAAGGCACATGGTTACTGAGAGCCAGGACTCTCTCTCTCTTTGCCTCGTCTTTTCTCTCTTTCACTCTCTCTCTTCTCTCCTCTCCTCTCCCTCCCCTCCCCCCTCACTAACTCACTTGCATGTGCTGCACACATGTGCATGTGACATTACACATATTGTACGTCCATGTATGTATGAAGGCATTGCACACACATTGCAGTGCTGGAGGTCAGAAGGCAACTCTGGAGTTTGGCCCTTGTCTACCCCTGTCCTTGAGGCAGCAGTAATATTCATTGCCACAACATGCCAAGCTACCTGATATATAAGCCTTTCTGAGCGATTCTGAGATGGGTTCTCGCACAGGTCTGGAACTTAACAGTGGTCTGAGTAGGCTTATCAGTGGCCCCAGGGATCACGCTGACTCTACCTTCCCAGCACTAGGATTATAAGTTTGTAACCCCAACTCCTGATTTATAAAATGTGGATTCTGGAGGTTGAACTCAGGTTCCCTTCCTTTCAAGAAAGGCACTTTACCAACTATGTCTCCAAAGACGTTTTGTCCAGTCTACCAGAGCTGGACCAGATTTCCTGTCAGATGATAGTCCCATTCTACCAAGAAAACAATCAGACAACTTTATAGACTTGTAACAAGATCATGGGATATTTTTTTTTCCAGTACGAATCTCACCTATGTCCTTCCTAAGGTCCCTGCTCATGCTGCTTCAAGCTGGGCCAATCAGAAGGCAAGGAGGTTTGGTCGCAGATAGACTCCATCGGTCACACATGGCAACAATACACTGGGCTCTATGCTGGGCACAGTGGGAAGACAGAGCAGAGGCAGCCTCATTTTAAGATTTGAGGAAACAAAGAGGACAGATGTGTTAAGACCCAGAGTGAGACAAAGAAGTTCCAGTCAAGACATCCATACCCTGCAGTTAACAAGGCTAGTGAGGAATGCCCCTGTATCTTAACCCCCAACGCCATGAGCAACCCAGTGTCAATCAAGCCTGTGTGTCTGTTGTTGTTATAACCCCACCTTGGAGATGTCCATCAATAGCACGTATTTGGGTATTAATTCCTTGGGTGCAGTTTAATCTGCACTCTTCTGGTCTAGACCAGGTCTAGTTGATCTGAGCTGGATTTCCTTGCACTTTCAGCCATCTAGAGGTTGGTCTGCCATCTCATTTTGCTGGCTTCCCCATGTCTGGGATTCATCTGGGCACGCTGTTGACTCTTGTGACAAAATAGACCAGACTATTTCCACAGGAGTCAGTGGGGCCCAGGAAAGTGAGCAAGAACAAGGGAGAAGGAGGAAGGAAGGAAGGAAGGAATGAAGGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAAGGGAGGAAGAAAGGAAGGAAGGAGGGAAGGAAGGAGGGAAGGCAGAAGGGGAAAGGACAATGAGGTTTCGGGGTCAACCTTAGAGCCAATCCCAAAGTCAGCAAAGAACCAAGAGGTGGGCCGTGAACCATCTCTGGCTAAAATGAACTGGTAAGTCCTACTGCAAGAGAAGAGAGGCAGGAGGCTGGAGAATTGGGGTATTCATATCATCGGATTGGCTCAAACCAAGTCAAATAACCAGGACTGAAAGCGAAGACGCCAGGCTTCCATGTGGCCACACCCACTCTTCCCCTACACCACCCTCAGTCTCCTCAAGACTGTTCACACTGGAGGCTCCTCTAGGACAAGGCCACATCCCACTCTTGTTGGTCTAACTTTATAACACTCTGTGGTCCACAGTGCCTCCCACCACATAACATGTCATCCTCTGTAGGTTCACTGTATACTGTGCATACATGTGTCACCATGTTCTTCTTGCGTTCATACATCCAGTGAGAGGGAGTGTCAACATTACAGTAGAGGTAGGGGTCTGCCCAAATGGAGAGGCCTTGAACATCCTTGTGCAGTCCCCTAACTGAATGGCTTCTCCTTCCCTGGTGATCTGAAGCCTTTGCTGAGTCCACCCCTCCCCGGGACCCTCACCAACTGTGGGACTCACTGCATCTCCTCTGTTTCATGCTCTTTAAATGTGTGAGTGGCAAGTGCACGTGTGCAGACCTGTGTGTTTGAGTTTTGTACATGTGGGTGGTGTGTGCATGTGTAGGTGTGTGTACTTCATGTGATTTTATATGTTTGTGTATGTGTATNNNNNNGGGGGTGTTTGCATGTATCTACACATGTAGAGGACTGCAGTTAATGGAGGGCATCTTTCACTTGCCAGCTATTTTTTTAACAGAATCTTTCATTGGACACAAATCTCACCAACTCAGGAAGAGTAGTAGCTGGGAGATCCCAAGAGCTCCCATCCCTGACCCCACCCCAGGAAGCACTAAAATTATAGACATGTGTCACCATGGTCTTCTTAGGCACATACGTGGTACACATCTGTACTCGGGTCTCAAGCTGTGTAGAAAGCACCTTGCATGGAGCGTCTCCCTAACCACAAAGAAGGGGTGTGGAGTGGGAATCCTTCTTTAAAACTAAGACCAGGCTCACTTTTTATTTATGTATTTATACACTTACTTATTTGTTATATATAAGTGCCCTGTCGCTGTCTTCAGACACCAGAAGAGGGCATCAGATCTCATTAGAGTTGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCCATGCTCTTAACCGCTGAGCCATCTCTCCAGGCACCACCACCCCCTCATGGGAATCCTTAATAGCACAGTCAAGATTAGCCAATCTGCCCTCCAATTTGTGGGACTATCAGAGGGGTTCAGTGAGCCCCCTGAAAGACTCTTATCTGTAAACACCTGAAAGAAAAGCAAAACGAGTCCGACAGTGGAGAAAGAGATAAATCGACGTGGCAATCAACCCTGTCTCCTTCAAATGTCAGTTTGGAATCTTTCGAGGCTAACTCAGGAAACCAGTTTTCTATTCCCGTCTCCCCCCCACCCCCCCTTTCCTACTTTATTATGTTTATGGAAGGAAACTTTATTGCTTCTGGAAGACTGTGGCCTTATCTTCAACCTAGAGCCTCATCCCTGGAAAGGTGGCCTTCTCTGGGGACATTTTCATAGCGGGGGAGAAGCAGCCACTGGAGACTAATAAGCAAGCAAAGAGGGTCTTGACTTGGCTCTCAGATAAGTGAGGCGAAACCTGGCCAAGGAACCAGTGTTGGCATATTCAAAAGAAGAAATAAAAAGACAATTCCATTTTTAATGGGAAATATAGAACAGCCACTGTGCCAAAAGTTGATTTTTCAGAAGCCACAGATATAAAGACTATTACAGAACACTGGGAAGACACATGAGGCAGCGTGCTTGGTAATCAGGCTCGGATAGAGAGCGTCCTCCTCACCATCGCTGCCTGGGTTGCCTTTCCAGTCAAGTGTCTGCATTCAATCCTGCCTCATTATCATATGTCTCTATGGTGGAGCGCTTCCTCCCAGCTTCCTGTGCCAACTTGCCATCCCCTCGTCAGCTGGAAAAGGCAAAATGAACTCAACTTTCTCCCTGTTCTAAACTTTGCTCCACCAGCCACAGGGCTTCCAGCATCTTCCAAGACTCCATGTAACCAAGAGCTCAAGTTCAGACACACACACACACACACACACACACACACACACACACACACGTTTGACTCAAAGTCCCATGTAACTGAATTTTCCATCTCTGGGCATCGCGGCACTCTGTCTCCATTGGTAACCAAGGTCCAGGAACAGTGAGGGCTGTTAAGTAGCAGGCTAGACATTCAGTGGGGTTGATTGGTTATGTTCTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGGAGCCAGTTAAAGCAATGGAAAGAACCATTTCAAGCAATTGAGCATTGTTGAACTAGAGAGACACGGTGGTTGTACTGAAACTAACTTTAATTTAAATCTGGCTGTGGATCAGCCATGAGACTTTGGGCACATTGCTATTCTCCATAGGCCTCAGATACCACAATGTTAGGCCCAGTGGGCATACACTTTCCAGATTATTTTGAGACAGGATCTCATCGATCCCAGCCTGGCCTCAACCTTTCCACAGTCAGGGGTGGCTTGAACGCCTGATTCCTTTTGGCCTTTACCTCGTAGATTCCGATGCAATGGTGCCAATTGTCAACACAACTTCTGTACTCATCTAGGAGACCAGCCTCCAGGCACACTTGGGGGGGTGTGTTTTTCCCTCTGCACATGAATGTAAGGAGAGGATATGTTGACTGGGTTCATTGAGGGGAGTTCACCGTTTGCTGGCTTCAGACCTAGACTTTCTAAAATGGAGAAGGCAAGCCAAGTGCTAATGTCTACTCATCCCTCTATTCTTCCTGACTGCGAATCCGATGAGACCAGTGCTTCAGCCACCTGGCACCTTGACTTCCCCACCATGGAAGGCTGTACCCCTAACCTGTGATCCAAAATAAACCCTCCCTTCCTTAAGTGGATGTGTTGGGGTACCTTTATTTCATAGCTGGCACAGTGAAGGGAGCTAAGACATTTGGGATTACAGTGTTCCACCTGCTCATGAAGAACCGGGATCAGCGTGTAAAGGTCCTACCAGCTGAGCGACATCCCTGCCCCAGCTTCCCTGATTTTTATGTGGATAAACAAGAAGGTACCTGCAGACATTTAGAACAGGCCCAGTAAAAGTTCAGTAAAGATTGGCTGCTAAATGCCCTGTAGGAACAACGGAGAGATGCTTAATCTAAGAGGAAAGGGACAAGTGCCTTTGAATTCAAGATAAGATGACTAACGAAGTCTCATTGGAAAGTACTATGTCGCTCACTATGATGGCACCATGTGCTCTCTCCCTGGTAGACCCTGTGTAGACATGTGAAGACCTGGAGGCCACAGGCTGTTTCTCCCTGCTGTTGAGAGCTGAGAAACTTAGCTTGGAGAGTAAAATAGCCATAGACAAGGTCACACTTAGTGCAAAGTTGAGACTTGGTCTCCTCCAGGTGCTACCATCCAAATACCAGTACTGCCTTGTTGGACGATAACATCTCCCAAATTAAACATCACCAAGCCAGACCCTCCTGTCTTCCTGTGTTGCCGGGGAGAGATGAAAAGAAATATAATTCCTCCTTAAAGAATTTGAGCTCTCAGGGAAGAGGTGGTCCTCTAGATCAAGGATGACTTCCTTAGGCCTAACGACTAGGGTGTCTTCTGTCCTGTTCCTGCCCCTGCAGATTGGACCCCCGATGACTATTACTACAGTTACGAGCAGTCCAGTCCAGACAAAGACGCCAGTGTCACGCAGACCTCCCCCGAGAACCCCGACTGGTACTATGAAGACGATGGTGGGTGCCAATCCGAAGGGAGGGAGCGTGGCTGGACTTCCGTGTGGCCATGTGCAGGGCCTTTCTCTCCCCTCTCAGGCCTGTGTGGTTAAATAGGTACTGAAGAGCTTCGTAGACTGGATCTACCCCCCATTGAGTCCTGCCCTATGAGAACAGGGAAGGTGCTGAGAAACATCTCCCTACCTCTAGTACCAAGAGAGGAGCAGACTTGTCCAAGGCCGTGCAGTGAGGCAAGGCCTCGTCATCCAGCTCTCTGGACACTGCAAAGAATTGTCAGGCATAACATCAGCTCTGTGTCTTTGTCCTCAAGCTCTGTCCTAACCATGGAAAAGGATTTAGCTTACCTTTGAGTGTTTACATTCCAGCCCTGACAGGTCTGGATTTCTGCCTTCGTCCTTTTCCTTTCTCCTTTTGCTATCTGTAATCTGTGTGTGCATGCCCGTTCATGCATGTGTGTATGTAAGTCTGTGTGTATGTTTAGATGTTTGTGTACACCGGTGCATATAAAGCCCAGCAGGCAAACCCTGATGTCCCGATTCAGGACATCTACCTCAGTTTTTGAGACAGGATCTCTCACTGGCCAGGATTTATCCTGATTAAACTGCACTGACTGACCAGGGAGTCCTTCCCTCCCCTGGGGGTTCTGCCTGCTTCTATCTCCTGGGTGCTGGGATTATAAGTATTTGCTTCTCTGCCCAGCTTTTTCTTCAGACTCTTTATACAGTTGTTAGTGTGGCTATATGAATGTTTGTGTGTGTTTGTTTGTATGTTTTGTGTGTTTGTGTGTATGGGTATATTGTGTGTTTGTGTATGATTGTGTGTATAAGTATATGTCTACATACATCTGTATTTGTGAGTATGGCTGTGTGCATACATGTGTGTATATGTGTGAGTGTGCTTGGTATGTGTATACATGTGTATATGTGAACGTGGATGTGTATATAGGTGAGTGTAGTTGCACGTGTATTTGTGTGTGTGTGTGATTGTGTGTGTTTCTGTGTGTGAATGTCATTGTGAGTGGGGTGTGTGTGTGTGTGTGTGTGTTTCTTAGTATGGCTGTCTGCATGTGTATGTAGTCACACACTTAGTTTTGGTTCTGGCTCCTTAGACTGAACACTAGGACAGAAAGGGAAAATATGAAGCTAGAGGCAGGCAGCACCACATGACTGAGCCAGGGGAAGGCATGGGAAGCACTTAGCAGCTGGCATTAAAAAGCTGCCTTACTGCAAAGTGGCCTGGAAGGCAGGGCCAAGATACAGGGCACAGGGGGAACATCAGAAGACACCATCAAAACAGGAGCCAGGCCCCGGGATCCTACTTCCCGAACCAAAGAACAATGAGTGTGCGCGCAGGACAAAGAATTCCCCAAGGGAGGATCCATTCAGACGACTATGAAAAAGCCAAAGGCACAGATGAAATATGACAAATCTAACTGAACAAGGAGTTGAAGAAAGACGAAGGCCACCAGGTCATTTCCTCTGAGCTGTCAATTCTCTGTCACCCTCTTTCCTTTGCTTTTCCTTCCTGATGTTCAGAAAGCCTGTGTTTCATGAGGGGTGGGTTAGCTTTGCACACTTCTGCCTGACCTCCGCCCCTGGGCACTGGAAGTAGAGGAGGTCTTCAGGCTTGTGAAATGCCTTCAGCATCAGAGACAGACCCCAATGTACTCCCGGCGAGGTGGGAGGGGAAAAACACTCACAAGAGGAAGGGGACTTTCTCAATGAGAAAGCCGGGTCCAAAGCAGGGCCGAGGGACACAGTCACAATTGTGTCTGCCTGCCTCCCCTCTTACTGGCATGCGTTCCTCTCCCCGGCATGTGACTGCTGCTGCCCTTGATCTCGAAGGATGATACAGTTTTTGCCTTTGTCCAAGCAACAGTTCTATTGTTGATCTCCCGTTTGGGGCAGGTGGCCGACGTGAGGTGAGAAGTGGGTCTTCTCTTTGGATTGCCCCTCTCTGACCTTGACTTCTGCCTTTGTGTCTTAG
Seq C2 exon
ATCCATGCCAGTCCAACCCCTGTGAACACGGCGGGGACTGTATCATCAGAGGGAATACCTTCAGTTGCAGCTGCCCGGCCCCCTTCTCGGGGAGCCGGTGTCAGACGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000016659:ENSRNOT00000022382:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0000822=EGF=WD(100=83.8)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]