RnoINT0097189 @ rn6
Intron Retention
Gene
ENSRNOG00000018478 | Myo3a
Description
myosin IIIA [Source:RGD Symbol;Acc:1560083]
Coordinates
chr17:89018243-89031269:+
Coord C1 exon
chr17:89018243-89018398
Coord A exon
chr17:89018399-89031169
Coord C2 exon
chr17:89031170-89031269
Length
12771 bp
Sequences
Splice sites
5' ss Seq
CAGGTAATT
5' ss Score
8.55
3' ss Seq
GAAATGGATTTTCTTCACAGGCA
3' ss Score
6.15
Exon sequences
Seq C1 exon
ATGCTTGACCAAAGATTACGAGAAGCGTCCAACAGTGTCAGATCTCTTGAAGCATAAATTCATTACTCAGATCGAAGGCAGAGATGCAATACTGCAGAAACAACTCATGGAATTCATTGATATTCACCAATGCCTGGGAAGCACAGAGAAGGCCAG
Seq A exon
GTAATTAAACAATGTCTCAGGTTTCCGAAAGGAAGCATCTCAAGATTCCAGAAAGTTTTATTGTGTAATAGTTGTTGAGGAGAAAGCAGCTCACATGTTCTTGGTGTGATTTCAATCTAATGGAGTATTTGCTTGGAGAGAGAGTGTTACTTGTTGAGTCTGGGTCTTGTCCCCCCATGTTATTCAAAATGTTGGCAGCATTTTTAAAATGACTTTATCAGAACAAAAATTATAATTTATAACAGCATTGGAATATGTGTTCGTTGGTATTGATGTCTCATTTACCGTTCCCTTCAAAGTTAGGCATCTTTGATGGGAAGGGGATGGATATAGAACATTTCTGTCATAAGCAGAGACCTGACTCAACAATCACCTAGATCTCATCCAGCTGTTTGTCCAGCTGTTCTGAGGAATGAAGGGGCATGGGCACATGACAGACTCCCCAAACCCTGGGGAACGGTTTCACAATAGTTAAACTTGACATTTTAGCATGTATACTAAATTAGGAAAAATCTGAAGTGTAGTTTCAAGTTCTGAATATGATGTTTATAAATATGCAGTTACCTCAGTTAGTGGGCATAGATAAAAATCAGTTATGAGTAACTCATGTTCCTCAAGACAATGCATGTCAGCAAATATGGGCAAGCAGCTTAGTGTCTCATAAGAACTGAGGATGAAGGCAAAGGGCTGACCTAGGTGTGTAGTAAAGGAATCTAGATCCCATTGTCTTCCTCAAGAACTGCTGGCCTACTGGGGCCCACTCACCTGCCCCCATCATTGCCTGTGGATTGGGTACCTAACAGCCTCTCAACACTCACAAACTAACTTGTAGCTTGTCATGATTCCTCCAAGATTTGGAACCTCTCAGGACCATCTGATTCTACATGACATGCCCTTTACCCTGTGCTCTAGCCATTTTAGAAATTCTCTCATTCTCAGAAATTCTGAGCAGTAAAAACAGTGGATAGGTGACATATATATAATATGTATATACATATATATGTGTGTGTATATATAACATATAATATATTATAGACTATTCTATAGAATATTAAATTAGGTCCCAAAAGTATTTTATAAAACTTGAACTTCTACCTAAAATATTATTTAGAGTATGGTTTACAATCCTTGGGAGATATAGCACAGCATCCACTTAAATGATAACAGTTTTGAAATTAAGATTTCCTTTGGTAGTATTAATAATTATAATAATTATCTTATCTTTTCATATTTATATAATAATTAAAATTAATTTAGTACTTTTACATGGTAATCTCCATATTCTCATGATGATTAATGTTTATGTGTATAAATTATTATTCTATATATAATTTTACAGAAGCAAACAGGACCATGTACAAGGTTTAATTACTTAAACATTGTTGTTTAGACTCCAAATACTACCTGTCTTTGTGGCACTTTGTCCCCCTTGACACATAAATGCAGTTGAAGGCAGAGGATTAACAAATGAAAGATGAACTGAAAACTTGTTCGACCATTTAGTGATACCATGCCTGGTGCGAGCTTTCAACTCTTTATTAGGTCTGGGACTTTAAGCAGTATAAAGTGACACAAACGGGTTTTTAATTTTACAAAACAGAGTGGTAAGCTAAGAAAACAGGAAAATCAATAGGAAGTAATAAAACGCTTCTTTTAATGAGACATAGTGGATGACTCCATTTTACTTTCTATTTTCTAGGCACAATAATTCTTCTCTAGAGACTTTGCTGGTCATGGTAGGGACTAGTCACCTTTTGGGGACATTTGCCATCTTTCTTAGCAGACAAGACTTTACAATCCTATTCTAGTAGTTCTTACAAGAGTATTCTATTCTCCATGTGCATGTCTCAAGGAAACTTCAAACTCAACATCTCCAAACTCGATTCTTTGCTACCCTGCCCCAGATTACTTTCTTATTCTCTTTGTTCACAATGTTACCTTCTCTCATTTATTGAGGCAACTGAAAATCCGGGTTGACTCTTGTTATCTTCTTCTGGTTTACATTTTTAGTCAAAAGCAAGACTCCAGCTTCAGGGGGCCAGGGCTGCTACTCAAACGAACAGCAAGCTTATCATTGATTACGTTTGCTACTGTTTAAGTCATAGGTGGTGATGCTTCCTTGTGGTCTCCATATTTACTGAAGATGGGGAAAGGGAGGGTGTATGGGAAGATCTGACTGGAGAAAGCTTTTGAGAGTCTGCTTGGGGTGGGGCAGGAGGGCTTATCCTCTAGTAGATTGATGAGGTAGGACATGTGTGCAAATAACCATTTTGCAGAGTAGCAAGCTTCAGCGCCATAAAGGAGATCCAAATTATGTCTTGTGGAAGTCCAAAAGAAGCAGAATTTTCCTTTTCTAACAGGAATAGGAAATCTTTAAATAGAAGAGGTGAGCTGGCTTGATCTTATGAAAATAGTTGCCACAAAATAAATGTTATATGGATTGAGCAAAATCATGAGGGTAAGATGTACTCAAAGGAAGTCATATACTTATGCTCTTAAACTCTGGGGTAGGATTCGAGAGCTCTGGAGGTCAGATAGCACTGATGTTCAGAAGGGCTAAACCCACATCCTTCACAGCAGGAGGTGGTGGCCTGTGCTAGCTTACAAATCTCATATGTCCTACCAGGCAAAAGTATTTCTTTAGTTCTAAAAGTATTTCTTTAGCTCTAAAAGTTTTCTTGTTAACCTTTTTCTCCTTGCGTTTCTTCCTGAATTTCAGTTATTATAATTTTGGGTAGCAAGCTGACTCAATCCCTACTGTGTGCATCTAACATTCATATTTAAATGGCTTTGGCTGGGACTTGACTTCCTACTATGCCTGCCAATGATGGTAGGTGCAACCCTTGCAGATGTCCAGTTCTCATTACAGACCCCCTGGCTTCAACCACCAGGGTGGCATCTCCATCATGCAAGACTCACAACAACAAATGAGAGACTCAGGATTTTCTCTTCAGCCAGCTAGAGCATGCATTAACTCTACAGCGTTGAACATGAGGTAAGAACTCCGAGTATCTCAGATTAGCAAAGATTCAATAGGACACAAGTTTAAAAACAAGATAATCAGCATTTGTTTTTATTTAAATAGGAATCTGTCAACTCCAGTACTTTGACTAGAGGTCGCTGCTAGCTTAGAACAAAAATAGAAAAGGAAGAACAGTTCAGAGAAAGACAATTCTAATATTAACAAAGGCTGGTGGTAAATTGTGAGTGTTGAAAGGATAAGTTGCCTTTGGACTTGGCGGATAGTTACCAAGTCGAGATCAAGAGACAGCAGCTAGTGTTTGTGCATTTGGGGATTATAAACCTCTCGATTTGTATATAAATATATGGTAGGGTTGTGGGTTCTCTTAAGTTGTTTGGAGTTAAGCAGCTGGATGAGTAATCACGTTGGGAGGTTCTATGAGTATCTCTACTCCTAAGCAACACTATATAAAGGAAATTGGAGTAGGCAAGGCAAGGAAATATCAGTACAAACCTAAAAACCTTTGAACACTGTAATTCTAAGAGTAACTTATGTTATGTTGATGCCTCCAAACTGAGGGAAGAACATTCACTCTACCCATCATCTGTGTTCAGTCACTGCTGGAGGAAGCTGAGAGTGAAGGGGGCAGATGCTCACACAGCAGATCTACAAAGCAAAGGCGTTGGGTCCAGATTCTACGTGGCCTTAGGTCTCTGTCTAAATCTACCGTACCTTTCGAATTTCTGAAGAATAGTCATACAAGCCTAGATTGTTGTTTCTAGAAAAGAGCTTTTCATGTGGCTCCTTCTTTTGAAAAGTAGAGAAACTGAATCCCTCTCAAGCCATCCCTTAAGTCTGACCTCTCAGAGTAATGCTTTTTTATGAGTTTCTGTATTCTTCCCATTAGCAGAGCTTGCCAATCATGACAGTGTGTATAATATTCTCCTCTCTGTGCAGTCACATTTGATGCAGTGTCTCAGAACTTCTCAGTCATGATTTTATTTCCTCAATTTCTTTTTTGGCTATAACTAGTTCATTTTTATTTTTTTCTCTGTATAATTTCTTCATAAGGTTTATACTTTTTCTTTTAAAAAGTTTTGCTGTTTTTAATTCATCTCTGTTATATTACCTCCTGACTGCAGTTTCTCCTCTCTCCTCTCCTCCAGTCTCCCACTACCATCTCCCCTCTCCCCCAGACCTCTTCCTCCTCCTCCTTTTCCATTCAGAAAAGGGGAGTCCTCCCAGGGATATCAACCAAGCATGGCATATCAAGGTGCAGAAAGACTAGGTGCCTACCTTCTTATTAAGACTGGACACACCAAACCAGTAGGAGAAAAGGAGTCTCAAAAGCAGGCAAAGGAGTCAAAGATAGCCCAACTCCCACTGTAAGGAGGCCCATAAGAATACCAAGCTACACAACCATAACATATACAGAGGACCTAGGTCAGACCCATACACGGTTGTCTGTTTAGTCTCTGTAAGCCCTTATGAGCCCTTGTTGGTTGATTCTTTGGGCCATATTCTTGTGGTTCCCTTGACCTCTCTGTCTCCTATAATCCTTCCTCCTCCTCTTCCGCAGGACTCCCCTAATTAGCTCAAACAAAGGTTTGGTTGTAGGTCTCTGTATGTGCTCCCATATCAGTTGCCGGATGAAGCCTATCCAATGACCCTGGGCTCTGGTCTATGAGTATAATAGAGTACCACTAGGAATCATTTCACTGACATTTATTTTTTGCTGGTCCTGTTTGATTCTAGTCTACATCTATGGGTTATTTAACCTCTGGTCCCTTATCCTTAACCTTGAAGATTAAGGTGTCCTACCCGAGGCAGCACCAGGTGTGTTGCAATCTCTATGGCTGAGAACAAAAGAAACCTGAGACACTTGTACAGCAAGTGTTCTATCCACAGAGCCATCTCACCAACCACAGATAGGATTGCTTCTTAAGGATAGTAGTCAAGTTTAAAGTAGAATATTATAAGTAGAATTCAGCATGTTTCCCTCCTTCCTTACTGCCAGCCTTGTTGAAATGTATTACTGGCTATTCAGCTGCCCTGATTTCATTTTCTTCCTAGTTTGCTTTCATAATCACTGCAGAATGGCTGAAGAAGAGTGGAAAAGAAGAGAGGAAAGAGGAAGGCAGGGGGGAAGACAGAGGAGGATAGGAGAAAGGAGAAAGGAATTGGAGGAAAATAAAAGTACTAGACTTAGCAAGTTTGGAAAAATTCTGATTCATTTTGAAGTCAGAGATCAAGCATACACAGGCCCAAACACACACACAGACACACACACAGACACACAGACACACAGACACACACACACACACACACATGCACACGCACGCACACACACATGCGCAGAGCGAGAGAGAGAGAGAAGCTTTATTTTTGAGTGAAAAATCTGAAGTCAAGTTCACAATATTTTATCAAAAGAAAGAAAAGGAAAAATATAAATATCTAACTATGACAATTCTGGTAATAGAAACAAATTTGAATGGGTTATTATTACTTGTATTTGATTCTTATATAAATTTGACAATATTGCAATCTGTTAAAATCATGTGATATATGTGTGTATGTATGTATGTATGTACAAAGTGTGTATATTTGTGTTTGTGTGTGCTTGTGTTTGTATATCCACACATGCATGTAATCATCATGTGATATTCACAGTGAATTGTTTACAGGGTTCCCACAGGTGACAAAATCCTTAGACACTCAAATCCCTTATGTAAATAATCAAAGTATAACCTCCTGTATACTTTAAGTGACCTCTAGATTATAATGCATTCTTTAAAAAATGATGACATGAAAAACATTCGTACAAGTTACATGAAGTTTTCCAACTATTTTCTATCTAGATTAATTGAATCTATCAACTCAAAACCTGCATCAATAGAGAACCATATGTATGTGTGTGTTACATATACCTGATTGTATTATATGTAGAAAAATTATATGTGTAAACAAATAATATTCATATATAGATACATGTATTCATATATTCACGTAGGCAAACCAAACTTCAGTGTTTATGGCCTCAGACCAGGGATGATAGTATAATCCCTTGTTTTTATTCACATAAGGTGAAGGTAGTGATGCACTCTGTTGCAGACATGCTGAATTTAGCATGGCAAGTAACTATCAAGATAGAGTTAATTGAGTAGGTAGTCTGGTATACTTATAGTTTGTACTTTGTGGGAGGGATTCATGTTGGACACAGCTTTTGAGTCCCTTGTTGGTTGAAGTGTTCAATGACATGGTAAGCAATGAGCTTACTGAGTGGGTGCCAACAATAAAAGGTGAAGGCTGTAGGTGGTATTCATGGAGAAGCCCATACTTAGGGACAGACAGATGAACCAGAGCTAGAAATGGGGGAATGGCTCTCAGAGGAGAAACGAAAGGGAATGTGGTCTCTCACAAGCCATGTAAATGGGTATATCAAGAAGAGAAGAGTTGCCTGTGTCAGTGAGGGACAAACATGGAGTTCTCTGATGGTTTTGACTAGCAGAATGGAGAGAAATTAAGGAAAACAGCGAGATGAAGAGACAGGACAGTGAAGTTGCTAAGAGGCACAACTAACTGTAAAGAAATGAAAAGGAAGAGAGGCTAGGAAGACAGGGATCAAAGAGTATTTGCAAATGAGAGGTCCTAGACCACTGGATGCCCATGGAAGGTCTGGGCTAGCTCAATACACAGGAGAGGAGATAGTCACAGCAGTGAACTGAGAATACAATCACATAGCAAAGGACTTGGCCTTTGCTCAAGGTCCAGGAAGCTCCTCCATTGGAAACAAAGAGGTAAACAGTAACTGGACAAAAAAGATGAAATTATTTTTACTTGTTTGTAATTGTTCAATGAAGTGTGAGCTTTAAGTATCAGCTGAAGGTTTCAATTTTTATACTTTTCTACATAACTTTCCAACTTCACCCCCCTTCTGGTACAGCCACAAGTTTAATGAACATGTTTGTATCTCTTCATGTCAGATGGAAATACATTTTTTTTATTAACTTGAGTATTTCTTATATACATTTCGAGTGTTATTCCCTTTCCCGGTTTCCGGGCAAACATCCCCCTAATCCCTCCCCCTCCCCTTCTTTATGGGGTGTTCCCCTCCCCATCCTCCCCCCATTGCCACCCTCCCCCCAACAATCTAGTTCACTGGGGGTTCAGTCTTGGCAGGACCCAGCGCTATGGAAATACATCTTTAGGGAAGTATTGGGTCTCTGTGAATGGAGAGGGCAGTTCAAACTTAGGTAGGGACTGGGCAATTGTAGCATCAATTACTGTAGCTGACAGGACAGTCTGGAAAGCTGACTGGGCTGGTGCTGCCTTCTTTTCCACCATCAGTTCAAGATAGCACACTTAAGGCAAAGGAGCTAAGAAGCAAGGAAATAAAGACTAGCTTTCCAGGGCACAGCAGTGAGAGTCTGAATCCCCATTGGTCCTAACAGTTGTCTTTGTTACTGAAATGTAAAGATGGATAAAGAACCAACACAAAAGCATTGATGAGATTTCTGTTTGACAAGGATTGCTCTTCAACCCCAGTGGCTTCCGGATCACCTTAGATGATAAAAGTTGCCATTTACACGAGTATTTTTAACTAAAGTAAAGCAAACAAAGCTGCTCTGTTACAACTAAATAGTAAAGAAGAAATTTTAACTTCAGGGCAGCAAGAGTTATTTCTTTCTTCAGTGTGTAAAACTGAAACACACACGAAGCTGTAATAACTACCCCTGAGGGTATTGGTGACCTTTGACAACAAAAAGAAATTATTTACAGCGTGAAGCTATGTCTCTCCAGTATTACAGAGTAAATAGGAGATACGGTCTGGTTCACAAGCTGTACTTCTCACAAGAGGACGAAGTCTTATAGAAGGACTTTGGCTTTGCTTCCTCTGAGCCTTAAAGAAAGCAAACATTCAATAAAGGAACAAAAATGTCAGCCAAGTCTATGAAATAAAGACCAAGAAAAAAGATATTAAAAGTATAAAACCATCTTGAAATGTACAGTTATATCTCTCTTTGGGTATTTCTATTGTTTATAAAAATGATTTTTTTTTAAAAAATGAGTTGTCTTCAGTATTACAGCAATGAACCTTTACCAAAAGTAAAACATTCACCTATTTACCCAAGAAATAAATCTTGGGTACTTACTATCTACAAGAATCTGTTCAAGGATAATATGGGATTATCAGCCAGGAAATTACAACAAAACAACTCTCTTCTGGCAGGGCTTAAATGCCTGTGGGAAGACTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAGTAATAGATAGTGTAATAGATAGTTAAAATGGTATCCACACTAAATTAAAACAAAGCAAAAAAAAAGGGCAGAAAGGAGGACTAAGAATTCTTTGGATGGGGAGTGTGACTCCAGGGTTAAAAGTAGTCAGTTAGATTTCTGATCCTGGGGTGGTGTATGATTGTGTGGCTCTCTATCTGGGTAGAAAAAAGTCATAGCAGAGTCACAGACAGGAGTGTTCTGAGTGTCAGAGACATTGCCAACATGGAGTCACTGGGCTAGAGAGTGGTGAGTAGGGAGGTTGTTAGGATAGAAGACAGATAAACTTGAAAGAGGGCAAGGAGGAGTCTATAAGAGAGGGCTTGGATGATGGAAAAGGAAGGGGAGAATGGTATAATTATATTAGAACTCTAAATTAAAACATAATGATGTAATGATAGAAGACAGGAGGGGCAATGGGGTAGGGTTGGAGTCAGACCTGACAACTTTTCTTTGAGTGATACCTAAGAATACTGAGAAGGGTGGCAGTTTGGACTTGTGTTTAAAATGACCATCCTCATTATTTGCAGTAATTCAGACATACTGGTAAGAAAGAGGATGTCTTACAATTCAACCATATTCTGCTCCCCTTAAATTTATAAAAATGGAGTAACAAGTATTTCTCTTGTCATTGTCATTCACAAATACAATTTCTTAAAGGCTCATTCCATTCTAATGTGTAAAAGACCTCAGAGGTCATTGTTCTACCTAACAGCTAGCAGAAAGGTGAACAGATGTAATCATCAGTAATTCTTGAGTCTATCCCAGAGAATAATGGGAGGAGTTGCTGCCTGCAGGTTTGAACTAATGAGCAGGCAAATGAGGAGAATTTCTTCTTACTGAGCAGGAACCCATGAGTAGAGGACTTTTCTAGAAGTGTGCTGAGACAAGAGCACAATGTTTGATGAATTCCTGAATGCCACATTTGAGCAAGTTAGAGAGTTAAAAACAATAAAAATCACAGTCACAAGAAACTCCTATGTTTCTGTTTCGCTTCTAGGAGATCAACTGGCTTCTCAGAATGAATACTGGAAAACATCAGAGAGAGAAAAAAAATGAGTTCAACAGGATGTATTTTATCAAAGTAAAACACAGGCTAGAGAGACTTGGGTTCTTCAACTTTAGCCAACCTGGAAAAAGGAAAATAATCAAACACCCCCCACCCTACCTTCCAAGAACAGGGAGGAGAGGTGAGACACAGGAGAATCATAAGTGCTCGCTATGTTCTCAGTGCAGATCCCTGGGAGGATCAGACTGGATCGGCACAGCAGTCTACTGCATGCTGCACTGATTCCCAGCCCTTCCTCCATGAGAATGAAGCCAATTTATGGGTGTTCATTTACCCAATGCATCCTATTTGGTTATCAAGAGAAAATACCAGAGCCCCCACCCCAAAAAATTGAAATACACATACAGTGGCAATACAATTGGAAGAATCAAAACAAGTATTATAGCCAGACTTAGAGATGGTAGACACATGAGATCATCAGATCAAGAACTCGTAGTACTGAATGCCTAAAATAGGAAATAAATCTAAAATTCGATCTTCTAGGCTTCTATTTTAGATAACTACAAAAGTAATTTCAAAGTATGTTAAAAGAAATATATGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAGAACCAAAAAAAAAAAAAGAAAGAAAGAAATATATGATTGAAAATTACTACAGAAAATAGTGGCATTTAAAACAGGAAATCAAGACAGGAAATATAAAAAAACCAAAGCTGGCAATTTGAAATGATCAATAAAACTGTTAGGCCTCTATCCAGAATAATTAAGAAACAAAAGAGAACACGTTGCTACAGATCCCCTGGACATTCAGAGCACAAAAAAAGAAATCTTAAGATCTTGGTTTTATTCCAGGAAGGTGGGGCTACTTCAACATATGAAAATCAACAAGTATAATACACACATAAATAGACATAAATGATAAATTACATGATTATCTTGACAGATGCAGTAAACGGCCTCTGACAAAGCCCCACATCACTTCATGATAAAAATACAGACAAACATAGGAAAGTAAGGAACAGACCACAGTGTAAGAAATGTACAGCCAACAGTACACTAAATGCAGGACAGTGAAACACTTCTTCTAATTCCAGGAACATGAGAATTGTGCCCAGTGTCTTTACTCTTTGGTGTCAACACACCAAAATCAGTAGCTGTTCTCCATATCAATAGGGTACTTGGCAAGATAGAAATCAGGAATAAATTCCCATTCATGGTAAATCAAAATATAAAAATAAAATACCTAGTCATGAACTTAGCCACTAAGGGGAGAGACTCTACCCCATGCTCATGGAATTTCTAAAAGGAACACAGGAAATCTTCCTAGAATTGATAAAGGGAATTAATTGAAAGCTTTTTCTCAGAAAACAAAACAAACCAAAAACAAGAAACATCAGCAGAATGGAAAGATACCCTTCCAAATCTGAGAAAAACTTTGCCAACTGCCTGCAAAACAGGAGATTAATGAACAGACTTGATAGAGTTCAAAAATTAAACACCGAACTCCAAATCATCCAGTTAGTGGATGGGCAAATGAATTGAATGGACAATTTAAAAAAGGAGGAAATGCAAATGGCAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAGAAGAAGAAAAGAAGAAGGAGAAGGAGAAGGAGGAGGAGGAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGATCTTATATCCACAGATATGGATATGAATAAACCTAGGTTTTCACTGTCTGATAGAAAAATATGAGCATATACCCATTTAACCAACTGGAGAACTTCATAGTATGTTTTGTCAAGTTTTCTAATGACTTCATGGGGCAGGTATATCTACACTTATCTGTGAAGGATAAGTGGAATTTTCCACACATAAAAGGGAAACAATTCTGAGCAAGAAAAACAGAGACTAGCACAGAGTCTTTAAAACACCTGTCCTGGAGGATGTCATGCCCAGAGATAGGCAATGATACTAAAAGTGCTACAATATTGTGAAGATCATGAGTTTCATGCCAGGGAAGTGTTAAGTTTGTCTGTAGACAATGAGGCACCATCTGGAATTACTAAGCATCATATAACCACGTTTTGCCTAGGTTTTTGACAGCCAGAACCAAAAACATCACAGAGGCTGGCTTCACAGAAAGGCAGGCTGGACCTCAGCCATCTAAATATTGACCTTTCTGCTCTTTACCAGCTGCCCCTTGTCATCCTCCGGCAACAGTTTTTATGCTAAATGGACTCGTAGCAATAGGTGAAAAATCTAGAGACTGTCCTCAGTCAAAATGGATAATTGGATTTCTTTTTCCATTTTTAAAAAAAGGATATATCAAAACAAATTAATCTCTTCGTGTGTAGCAGAATATAAAAGATGTTGTCTGCTTAATATAGAAAATGTGGAGGAAAAAACTATGCACAAATCCTGCTGGAGAAGTCAGGATGTACCCTGCATAATTTCTCTCCTGTTGAGCAGGACTCACATTCAATTAGATAACTGTTGGTTCCTACATGGATATAAGTGCCAATATTGTACACTTAGGGGGGATATCTTGACATGCTGACCATTGACATGGATTATGGGCATTACTGATATTGATTGCTTTCTTCTTATAGCAGCTCGCATAGAACCTTCTGAATCTATGAAAACACCATGGAGTTTGTTTTGTGTTGACCATCTATGGCTGACCACAGAACCTACTTCTAAGTGTGGTTAATATACCCAGTGAGACTTCACTGTAGAAAATTAATTTTCCTTTGCTAGCAGATAGAAAATTCAGGTAGCTTCCTAATTAGGGGTGGGATACTTCAGAGCCAAAAGTAAAATCAATTTTCTATGTACTCATTTAATATTTCAAAATTTTGTAATGTTTATTCCTGTAAAGATTTGAAAATGACTGTATTTCTACTGTCAGTGGCCTGACATTACCTCAGAAAAAATCATATACCAAGTGAATTCAGGAGTTCATAATTCAATATCTGTAGTAGCTTCAACCACATATCAAAATGTCAATGATACTTCTTTATATTTTTAACCAGTTTGGTGATAATCCTTCTTTTCCCATTTCAAATTACTCAAGGAAGGTTCATACTAGAAATGATGTCCCTTCAATCATTTGTGAGGTACTGTAAGTTTAATATGTGGTGCTTTTCTAATGCCAAGGAGAAAAATTAAAGATCCAAATGTGTGATGATATTTTCTAGCATGCTCTCATTCAGTCTATAAACAGCACAGAAGAGATTTCCAGTACCCTGTGTACCTAAAACTTCCACACAGATCAGCAATAAATTCCTAAGTCAGAAATGGATTTTCTTCACAG
Seq C2 exon
GCATGAACGAATTCATACCAAGAAAGGTAACTTAAATAGATCTCTCATTTCCAGTCTGAAGGATGTAGATGATTTGGCCACCCTAGATGTTTTGGATGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000018478:ENSRNOT00000025053:9
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.006 A=NA C2=0.118
Domain overlap (PFAM):
C1:
PF0006920=Pkinase=PD(7.9=39.6)
A:
NA
C2:
PF0006316=Myosin_head=PU(1.6=32.4)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Human
(hg19)
No conservation detected
Mouse
(mm10)
No conservation detected
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]