RnoINT0108928 @ rn6
Intron Retention
Gene
ENSRNOG00000000065 | Pde6b
Description
phosphodiesterase 6B [Source:RGD Symbol;Acc:1311039]
Coordinates
chr14:2341028-2356609:-
Coord C1 exon
chr14:2356520-2356609
Coord A exon
chr14:2341169-2356519
Coord C2 exon
chr14:2341028-2341168
Length
15351 bp
Sequences
Splice sites
5' ss Seq
CAGGTACCT
5' ss Score
8.16
3' ss Seq
CATGTGTTTTACCCCTCCAGGTG
3' ss Score
11.84
Exon sequences
Seq C1 exon
GTTTTCACGAAGTACCTGAATTTTGCTACATTAAACCTGAAGATCTATCACCTAAGCTACCTCCACAACTGTGAAACACGCAGAGGCCAG
Seq A exon
GTACCTGTATGCTCTGGCTGATCCTTCCCCAGCCTTCCACCCTCATAGGCTGTTTTGTCTTCATGAATGGCCAAGACACTGTGATGTCCAATCGAAGCACGACTCTGGCCTAACAGGACCATTCATGTTACCAGTACAAAGCTGACTAGGGGGCAGAAGTGCTATGCTCACTTAGGCAGGCAGGTTGGGAGGAAGAAACTGGAAACGTCCTCTGCTCATTGCTACAACCTGACCTAATAGGCACAGCTTCCTGCAGAGTCACAGACAGGTTCCAATCTCCTCAGACACTGCCTTGGAACTCTGCAGGAACAAGAGTGAATTGTTAATTAACTAAGCACAGAATCTCCTTGTGGGATTGGGCCTGACAGAGAACCTAGAATCTGTTTGCTTTGCATGAGATAGAAATTTGAGTGTCCAGCTGGGTTCGTGTGCTGTAAGTTTAGAACACAAGTGACTGTGGAAATTTGAAAATGTGAGAGAAGAGAGGCAGAGCCAGGGTTGGGGGCCACGATCTTGACCATAAGCTACAGCCCAAGAGCTCAGAAGAGGTCTCAAGGCAAAGTGGTTCTCTTACCTGAGTCTCAGCCTGTGGGAACCTCTGAGAAATTCCAAACAAGCCGGGTACAACAGGATATGTCTGTATCCCGGCACTCAGGAGGCAGAGGCAGGGTGTCTTAGTCAGTGTTCTATTGCTGTGAAGAGACACCATGACTACTGTGACTCTTATGAAGGGAAGCATTTAGTCAGGGCTGGCTTACAGTTTCAATGGCTTTCAGTCCACTGTTGTCAGAGCAGGAAGCATGGTAGAATGCAGGTATGCATGGTTCTGGGAAACTGAGAGTTCTACATAGGGGTCCACAGGCAGCAGGAAGAGACAGTCATAGTGGGCCTGGCTTGGGCTTCAGAAACATCAAAGCCCACCTCCAGTGACACACTTCTTCCAACAAGGCCACACCTCCTAATAGTGCCACTTTCTGGTGACCAGGCATTCAAATATATGAGTCTAGGAGACCATTCTTTATTATTGTTGTTGTTGTTGTTGTTGTTGTTAACTTTACATCCCAATCACAGCACTTCTCCCTCCTTTCCTCCCTCTCCCACCCTCATCATCTCTCCCTCCATTATTTTTATTTATTTATTTGTTTGTTTGTTTATGTATGTGAGTACACTGTTGCTGTCTTCAGACGTACCAGAAAAGGGCATGGGATCCCATTACAGATGGTTGTGAACCACCATGTGGTTGCTGGGATTTGAACTCTGGACCGCAGGGAAAGCAGTCAATGCTCCTTAACCTCTGAACCATCTCTCCAGCCCCTCCCCTCCATTCTTATTCATACCACCACACAGGGCAATCACAAGTTCGAGGCTAGCCTGGGATACATACACAGCAAGACCTTGTCTCAAAGAAAGGGGACCAAGGAGGAAGAGAAGAATGGAGAGAGGGGGAGGAAGGAGGGAACAAGGGAAGGAGGGAAGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAATGAGGAGTAAAATGGAGGAAGGGAGCTATCTTGAGTGGGTGGTAGGTCATTCTGTGCCTAAAGCCAGGAAATTCAGCCATACAAAAACTGCTGTTAGAAAGTGTTAGACGACAGGTAACTCTGTGCTTTCCAAACTTCTTGTTCTGCCTGTGAATGCTGCGATGCCTCGACCACCCATGGTAAAGATGTGAAAATGTCAGAGAGGAGAGGCAGGGCCAGGGTTGGTGACCACTGAGAACATCTTGATAGCTTGTATCCATGTGGTAATGGTCACTTGCCAAGAGATCTCTGTACAGATACTTCAAGTCCAAGGCAGAGCCTGCCTCCACTCATCAACCAAATGTATAGTATATACAGCCATGAGAGTACAGGGCAAAAACCAAGTTTAGTCACAACTTGGTCCTTGCATAAAGTACCCAGGCATGACACTGAGGGGAGGGAGGAAGAGTGAGGCTAAGAGAGATGAGTGAGGTAGAGAAGCTAGGCCTGCAAGAGGAGGACCACAAAAGAGAGAGCTTCAGTCAGACAGGAGCAGCTGAATGGAGAGCCAGGAATAGTTGGGGCTGTCAGAGGGCTGTGGGGATGGCGAGACCAGTAAGGTAGGCTGACTAGAGGAGTCAGGATTGGAGGCAAGGAGCCCAGGCCATTCTGAGAGGGGGGCACACGGGGTGAGAGCAGTTCAGAGAGAGGGAATGATGACAGGCTCATTGGAGAGGAGAGGGAGGAACAATGGCTTGTTGGAGGGGGTCACAGAGGTAAGTGGTCATTTGTGGTTCTCAATCTTCATTGTACTGTCAGAAATAGAGAAAGGAGCATCAGGAATCTCCAGTTCTCCACCAAACCTATTACATACTCCATAGCCCATGACAGACATACACATGCATGTGTGCACGCACGCACACACACACACACACACACACACACATACACACACATCCCATAGCCTATGACAGACAGACACACACATATACATACCCTACAACCCATGACAGACATACACATGCACGTGTGTGTCACACACACACACACACACACACACACACACCAGAGGTAAGCCACCTACAATTCACCACAACACACATAGCACAGACCACACACCATGCATTACACTTATTGTCTGTTCCACACCATCAAAAATGCCACACACAACCTCACCATTTGCATCTCAGACACAAATCATACACATACATCATACATATTCATCTGCACACAGCTCTCACACAGCTGCAGAGCCTGTGAGAGAGCCTGTGAGCCTCTTATTCTCCAGCCTCAGAAAAGGTCTTTCTGTCTTCCCATCCCCCATCCCAGTGTCTTAGTGTTCTACTGCTGTGAAGAGACACTATGACCATGGCAACTCTTAGAAAAGAAAGCACTGAATTGGGGCTTGCCTACCATTTTGGAGGTTTAGTCCACTACCATTGTGGCAGGGAGCATGGTGGCACACAGGCAGACATGGCACTGGAAAAGTAGCTAAGAATCTCACATCTGGATCCTCAGGCATCAGGAGAGAACCATACTGGGCCAGGCTTAGGTTTTTGAAAGCTCAAAGCCCAACTACCTGTGACACACTTTATCCTTACAAGAACAAACGTCCTAATCCTTCTCAAGGAGTGCCACTTCCTGATGACTAAGCATTCAAATGTGTGAGCCTATGGGAGCCAACTTTTACTCAAACCACCACACCAGGTTGTGTCGAAGTGTCCTGCACTGCTCACTTCCTGCCTGTACTCACAGTCGTTCTTCTGATAGATGTGGATGCTGTCCCTATCTGCTGCCCAGACTTCCTCTCCTACATACATAGGTCTAACTTCAGTCAAAGAAAGTCATTGCTTTCTCTGCCCTTCCTCCACCTTCCTGATAGACTTAAATAAAAACTGAGTGCCTTCTAGAACCTCAGAATTAATCCATTGTCCTCACGATGTGGTTGTTGGTGTCTATTTGAAATTGTGTAAACCTAATTCACAGCACCAGGTGCTCCAGCAGAGCCCACTATGCTGCAGTCACCCTTCACCCTTCACCCTTCACCCTCACCACCCACAGCCCTAGACAACACTGACAAACTCACTTCACAAGTTAGTGACAAGTACTCCTACCCACTGAGCCATCTCAGTAGTACGTCATAGTCTCTTTTCTAACTGGTTTAGGTTTACAGAGTTGAGCCAAATTTGTATAGCCCTCACCAACAAGAAGTTTCTCCATCTTGACGTCTTTCATTGGTGTCATGAAGCTGCCACAACTAATGAACCAGCACTGACTGACAACATTGTTAAGACCACGCTTGATTGAGATTTCCTTAGCTTTTACTTTCTCCTTCTGTCCTAGAAGGCTATCCCAAATCCCACAGGATGTTCAGCTGTCACATCTCCTCAGACCCCTCTTGTCCGAGAAAGTTTGTCCTGTCGGCTTTTTTTCCCATGACCTTGACAGAGAAACCTGGCTAGCAAGGGTCATGGTTTTGGAATTGTTCTGATGTCATTCTTGTGATCAGACTTGGGTCACTGGGCTTTAGAGGCTAGAAGCCTTTCCACTGCAACACAGTGGGGTGCTGCCACAGGGTCTACCAGAAAACCAGGAAACCATTTCCATCCCACCGTACTGTGTCACTTTCACCACCGGAAGTCACCTGACCTGATCTTCTGTCCTTTGCTTTCTGAAGGAAGTCGTTGCTCATATCATACTTGGGAATTCGAGGCATACTCCCTCGGAGTGAAACATCTATAAAATTTGTACTCAGTTAGTAATTTGCTTAATAATTTATTTATGTCTAGATTCATGGGTATTTATTTTCTGCTTTAGGTTGCAACCCAGTATTATTGTATTCAGACAAATATTCCCACCCAGGAAGGCAAACTGTTTTAGCCCTGGTCCTTCAGCTGGCTCCTGTGTCTTCTAACACATTTCATCACTGTAGGAATCCCAGACTTCTCTGGGATGCTTCCTAACCCAGTACTAGAACCCATCATTTCTCTAAGAAACCCTGATCCATCTATTAGAAAGCTCTATTGGAAGCTAAGATCTGAGTATTGTTATAGTCTTTATTGCTCCAATCTCCTCTCACCCAACAAAGGAAGATCATGTGTGCTAACCCACGTGTGCATACGCAGTTGGTATATCACATTTAGCACCATACTGGTATAGAATTGAACATAAGTTTTGATTGATGTTCCTAGCCCTGATCTATTGCCATGAAGATTCTTTTTCGTACGTACTCTCAACAGAGAGACCCTTGGTCCTCTCTTCTGCCATGCACTTGCTAAATGTGAGAGGTTTTTTTTTTAATCAGGAATGCTAATCCACTCCCGTGAAAAAAATCAGAGCACAGAGATTATGCAACCCCCTTTGCCTTCTGTCCTAAAAATAAACCGGCACTTTCTCCATGCCCCTAAGGTGCATAGGTGCTCTTGGTCGACATTCTTTCTTGCTTAGTTTTAAGGGTAGATATGGATATATGTATATGTATATATGTATATATATATATATATAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGACTGGAGAGATGCCTCAATAGCCAAAAATAATTACAACTACTGCTCTTTCAGATGACCTGAGTTCAGCCTGCAACTCCCTATAATTAAACTCATAACTGCCTATAATTTTGGGGGACTACAATGCCTCTGCTCTCTGTAGACACCTGCATTCACATACACATGCATTTATATGCACATATCCACAAATAGATACCTGTTCACACACATTACATACATGCATGCATGCATGCACGCACACACACAACGTGGTCTAAGGCTTATAACTCAACATTCAGGTGGCGGATTCAAGAGGATCACCCTCAAGTTCCAGACCATGCTTGTCTACACAGTAAGCACAGTGAGTTCTAGACTAGTCCAGGGCTTTATAGAAACACCATGTCTCAAACAACAATAACAAAAAGGAATATATTCATGTGTATTTTGGATGTAAGTCCAGAAGTGGATTTTTCATGTATTTTCTCCCAGAGTGTGGCTTGCCTTTTCATTCTCTTAGTAATACATACGGCAAAACAGAAGTTCAGCATTTTAATAATCCCAACTTATTACAGTCTTCTTCATAGAATGGTATACCTAAAACCTCATCCTTAAACCCACGATCACCCAGGTTATTTCAGGCCATGGTCTAGGAGTTCTTGGATTCTTGTAAATGTAAATGTTGCTTTTATTTCCTCGAATGAAGGGATGAGATGAGAGTTGTACCCAAGCTTCGTGAATACCCAGCTTTGGCTGAGGCCAGAGAGTGTCTTTCTCTGTACTAACTACCCCAAGGTCTAGGCCTGGAAACTTGTAGCTTCCTTACAATCTAATCTTCCAAGCTATCTGATTCAGTCTGGCTTCTCCTGGCTTCTGACTGAATTGCTCTGCTTGGCCTCACACTAACTTTGGCAATCTGTTCTAATCTTCTGGCTCCTTCTCATTCTCTGGCCTTTTCTGTCTTCAATTGTCTCCGACCTGTGTCTATAAAACTGTCCTGTCCAAACTGCCACACACACACCACCTCACCACTCCATCTTTTCTCTCTCTTGCTGCTCTTAAGCAGTCTCTCTCTTCCTCTGCTGTTTTCATGTGAGTTGGACATTTCCTCTCTCTGACTCACTCTGTCAGATCTTTCTCTGGTTCATCACTTTATCTGCCCATCGATTAAACACACTTTTGAACTTGGCTGCTTCCTTCTACAAATTAACCTTTCCTTCATTGTAAATGATTAAACGTGTGTATTAAGGGTGTGTCTGAATTTCATCCAGATTATACTGTGATCCAGGGTGTATCTGCATATCTTTGGATATGATCCCTGGCTAGAGCAGCCATGTTGCTGGATTAAAATTCCTTTAAAGATTCTGAGTTTAGGCTCATCATTAGTTTGATGAACACTCTAAAGTCTGGATCTAGATTCACATGGGCATATGGATGTTGAGCTTTTAATCATTTGTGAAAAGACATTTTTTTTCTGTGAATTGTCTTTCCTTGTTGTTGAGGATTAGTTGAGTATATTTGCGGAGATCTACTTGTTTTTAATTTTCCAGGGATTTTCTCTGATCAGCCACTGTAGTTCTAGAGAAAATCTTGAGGATGATAATGTCAGTCTATCAATGTTGTTTTCTGTTCTCAGAATTGTGTTGACTATTCTGGGTATTCTGTCTTTCCACATAGACTTTATAGTCAAGATTTCAAGATTCATAGAATAGCTTTCTGGTATAACTTGGATTTTTCTAAATCTATATACCAAGTTGGAAAAAATAGTATCTTAAAATTTGTGAGTCTTCTAGGGTAAGGATGTAACTCAGTTGGTAAGAGTACTTCCAGGGGTTGTGGATTTAGCTCAGTGGTAGAGCTCTTGCCTAGAGAGCACAAGGCCCTGGGTTTGGTCCCCAGCTCCAAAGGAAAAAAAGAAAAGAAAAGAAAAGAAAGAAAAAAAAGAGTACTTCCCTACCATGCCTGAAATCCGCATTCAATTCCCAGTTCCACATAAAACCTGATAGTGTGGTACATACATTTTTGCAATCCTAGTACGTGGGAGGTGGAGGCAGGAGGATCAGGAGTTCAAGATGATCCTTAGCTATACAGTAAGTTGAAGGCTAGCCTTGGCTACATGAAACGGCCTCAGAAAAAAAATTCAAAATCACTTTAAATCTTCACATTAATTTTGATACTTTACTTCTTTAATCAAACTTTTGAAGTTTCTAGGGATTGGGGAAACAGTTCACAAGCATGAGATCTTGAGTTTGTTCCGTGGCACCCAAGTGAAAAGCCAAGCATGGGAACTTATGTTTGTAACCGCAGGTCTGGGTAAGTGGACACAGGTGAATCTCCTGGAGATCTACTGATCAGCTGACCTCCAATGTTTACCTCCACACAGATGCACACATATATACATGCACCTGCACATATATACAAAAGACTGAAGCTTCAGCACATAAATTTTATACATATTTCACTAGATTTATGCCTAAGCACTTCATTTTGGAATATACTGTAAGGTGTATTGTGTTCTGGTAGTTTCACCTTCCAGTGGTAGAGAGATGGCTCAGAGGTTAAGAGGTCCTGAATTCAATTCCCAGCAATCACATGGTAACTCATATGCATCTATAATGAGATCTGATGCCCTCTTCTGGCCTGCGGGAAGAATGCTATATACATAATTAATTAATAAACAAACAAATAAATAAGTCTTTTTAAAAAACAAAACGAATAAACATACAAATAGAATGATTCCACAGCCCAGTGTGGTGGTGCACACCTTTAATCCTAGCACTCAGAAAGCAGCAGTAGGCAGATTTCTGTGAGACCGAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGTCAGCCAGGGCTATACAGAGAAACCATCTCAAAAATCAAAACAAAACAACAGCAACAAAACATAGGGTTGCTTCATGGTGTAAGGAGATAGCACATTGGACTTCTAGAGGCTGAAGAATGATGTCATCTCTTGTGGTTTCATAGGATTTTTTTTTTAACCTAGTTGAGGAAATTTACTGTATTTCTTATTGCTAAGGTGCTCCATCTTGAGTTAATACTGAATGCTATCAAATAGTTCTTCATCAGTTGATAGAATCATGTAAAACTTTCTTTAGTTTGTTTATTTTAGGATTATATTAGTTAGTTTGGGGTTTTTGGTTTGCCGTGCATTTATTTTGAGCTGTGGTTCCCGAATCATACAGCTAGGTCTTCAACTGCTGGGCTCCGGTGGTCCCCTCACATTACTCTTCTGACTAGCTGAGACTGCAGATGCATGCCACCATTTCTAGTTTATATTATCTGAATTTGAAATGCTGAGGTGGTCTTCTGTGATATTGGTCGTAGGGTGTAATTATTTGCTAAGCAGTGTAATAGTAATGGGGCAAACATTTATTAACAACTGCATTATTGTTACAGACTAGTTTTACCAACATTCTTCTTTTTCTTAGACAATACTTGCTATGTACTTGAACTTGCTGTGAGGCTCTTACCTCCCAACTGACAGAATTATAGGTTCGTCTTACTATGCATGGTAGTTTTGCCAGTGACCAGTGAGGAATTTTTGTATCTATAGCCAGGTGTAGTGGTGCATGCCTTAATCACAGCATCTGGGAGGGAGAAGCAAGTGGGTTTTTCCTGATTTCAAGGCTGGTTTGGGCTACATAGTTAGTTCTAGGGCAATGAGGGTTATGTAGAGAGACCCTGTCTCAAAAATAAAAATAAAAATAAAAATAAATGTTTTTGTATCTATGTTAATGAGCCATATGGATATATAGTTTTTATTCCTTGTGATGTCTTTTTAAAAACCTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTAATCTTTTTTTTTACAATCTAGTCATTACCCCTATCCTGGTTTGCCCTCCAACAGTTCCTCATCCCATTCCTCCTCCCCTGTCTCCAAGAGGATATCCCCCATCCCCAACCCCACCCCACCAGACCTCCCCACTCCCTAGGGCCTCAAATCCCTTGAGGGTTAAGTGCATCTTCTCACACTGAGGCCAGACCAGGCTGTCCTCTGCTGTATATGTGTCAGGGGGCTCATATAACCTAGTGTATGCTGCCTGTTTGGTGGCTCAGTGTCTGAGAGATCTCAGGGGTCCACTGCTGGTCTTCCTATGGGGTCACCCTCCTCCTCAGCTTCTTTCAGCCCTTCTCTAATCTAACCACAGGGGTCCCCGACTTCTGTCCATTGGCTGAGTGTATCTACCTCTAACTCTTTCAGCTGCTTGTTGGGTCTCTCAGAGGGAAGTCACGCTAGGTTCCTATCTGTAGTAATAGTGTAGGTCTTGGAGCCTCCCCTTGAGCTGGATGTGGTGTAATGTACTCACAAGTATGGTTGCCTGAAGAGACCAAAAGTGTTGCGATCTCCTGGATCTGGAGCTACCTGCTGTAGGTGCTAGGAACAGAACTGAAGTCTTCTGCAGTAGTAGAACATGCTTTCAACCCTGAGTCATCTCTCCAGGCCTAGCCTGGTGATGTTTTCATCTGACTTTGCTTTCTGGTTAGTGCTGGCCTCAGAGAGGATGTTAGGCAGCATTCCCCATTCTGAGACACAGAGAAAATCAAACTCAGTCTCTCTCAAAACACAAGAATGGATCTGTGAAGATTTTAGCCAAACCTCAAACAAGCAATCATTTGTGCATCAGACATAGTGTCCTCTGATTCAACTCAACTCTAATCCTATCTATTTGGAGATAGTCAGATGCCACAAGTGTAGGGATCAGTCCAAACATGACCCACTTCTGATGCAAATGCCAAACTTTAGTCTGTTACCTGAATTTCTGACTGATTAGTTATAAAATAAATTTTAGCTAATTTTCTGCTGCTGTAATAAATTACCCAAAGCTAGGCATTTAACAAAGAAAAGAGATTTAGCTCCTCTATGGAGGTTCAAAGGCATGGTACCAGCTTCCACTTGAATATCATGAAGTCCTCCTGGTACCATTGGGCTTAACCTAGGATTTAGGAGAACCATAGCGTTCAGCCATAGTATTTCTTTGGTTGTCATTATTTTTTATATTGTTGGTGTTCTTATCTAGGTTTCATTATGGTTTTGTTTGTTTACTTGGGTCGGGGTGTTTGGTTTTTGACTTCTGCCATACTGGCGGACCGTGCTGAGTAACATGGCAGCCATAGCCTACTGAGAGTTTGTTGTCTGAGCACAGAAATACCTGAAGGGTAATGTCATTCATCCAAGCTAGGAGAAACCACCCAGCAGAGACCCATCCTGAGGCAAGGGCAGTCCTATAAACTAGTCATCTGATCTCTATTTAGAGTCCAGAGGTCCAGGCACATTCTCTGCCTTTGTGAAGGGTCATCCCAGCTCTCTTCCTCATGGCTACTATCTGAGAGGCTTTACTCTTGCCTGTTCCTCCATCCCTTTTCTCTAAGGAATGAAGGAAGCTACCAGAATTCTAGCCTGCCATTCCTGGGATCACCATATTTTGTAATACCCCCTTCTGTAAGTCTTACAGGGCCCCAATTCTCCAAGAAGTCAGACTTTAGGAAGAGAAGAAAAGCTGCCCTGAGACTCAGACCATAATGAGCATGTGCAGAATCCTGATTTATGCCTCTCTGTGGGCTTTGTTTTATTTATTTGGGGATGATAGAAACAGGGCCCAGAGCTTTATGCATGCTAGGTAAGTTCTCCTCAAACTTAGCCACATCCCTCACATATAAAAAGAAACCTCTATACTGGGTACAGACTGGCTCTGAAGGGCCTGTGGCCTAGCCTAAGACATATTGTTTTTTTGTCCCTATGTGGTAGGAGTACTGGTCACTAAGCATTAAACATTTTCAGACTCTCCCTCACAATGTTTCCTAAACCCTGGAGGTTCTGAGAATTAGTCAGATTTCTTTCTAAAAAGCACCTCAGTTACACTGATCAGAGCCAACAGAAGATAAGAAAACTATAGGGGACCCCCACATGCTGATGTTTACACTGACCTGCCACTTGGCTCCCAGTCAGGTGTAACAGAGCAATTCTTTCTGCTCATGGCACCAAAGACCCTATAGCCTCTACCCACTGTTTGCATGGCAGAGGTACATTGCTTCATTCGAAAGACACGATGGGAGGACTTACTGATACAAGAGAAGGGGTAAAGTCAGGGCCTTCTCAACGTCTCACATTTATAAGTTGTAAGCAGTGAGCTGTAAGGAGGTAGCCAGTCTGGAGTACCCACCATAGTGTCCCTAGACCTAGAATGGGAAGAAAAGGGCTGTGGCTTCCACATTCTTCTCCAGTAGTTCCTCAAAAGCAGAGTCCAGAACAGAAAATAAGGAAGGACAAGAAAGGTGAATTTTTAGTAACTTTTTTCTTTCTTTCCTTTTACTTTTTTTCCTCTTGAAACTGCCTTGTGTATCTCACATTGCTCTCATTCTTACTATGTAGTTGATGCTGGCTTTCCCTCCCGCTTCCATTTCCCAAGTGCCAGGATTATGGGATGAGCCACCGTACTTGGTTTTATCTTGGTTCTTAGTATAATGTTTTAATGTATAAGTTTACATGATTTAATTTTAATAACAATGGTGTTTTAACACCTGACTCCCAAGATTCCTAGATATTTGATAAATAGTTCTTAGTTCACCATGAAGTAAATGTCTCAATACTGAAGCTAGACTACAAAGGCATCGCAGTAAGAACAGCTGAGAGCTCATATCTTGATCCATAAGTAAGAGGCAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACACACAATCACACAAGTCCTTTGAAACCTCAAAGCCCTCTCCCAGTAACACACCTCCTTCAACAAGGCCATAACATTCTAATCTTTCCCAAAGAGGTCTATCTACCGGGGAGAATAAATATGTTCTACCAACTTATATATTTAAATATATAAGACTATGTCATTCTTAAGAGATTCAGAGTTCAGTCCTATGAGAAAACATTCTTGAATACAGGCTTCCTGTGAGTGAGTTTTGCTAGAGTCACAGATTGTCCTTCTGTTTTGGGTCATTCAAGAGAATTGATGCCATGCAGATGTTGCTATTAAGGCCCAGAAACATAACTCTTAGACCTCTTGCTGCTCAGTCATGTGACTCATACCAACTGTAAGTTTCAAAATACATTACAAACCAATAGTAATCAAAACAGTACTGTTATAAAAACAGATGGGTCAATCAACTGGAAATGAGCCCAGAAATGGATCCAAATCAATTATTTTTCTCTACAAAAGTACCAAGAGCACACAATAGGACAGATGTCAGTGAATAATGCTATCTACATACCACAGAAAGAAAACAAACCTAATTTCAACTCTTGTGGAGGAACCAACTCAAAGGGGATTATAAAATTAAGACTTGGAACTAGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCACAAGGCCCTGGGTTCAGTCCCCAGCTCCGAAAAAAGGAAAAGAAAAGAAAAAAAGACTTGGAACTAGACAACATATGAAGAAGTTTCTGATATTTTTGTCAAAAGTTTCATGAGTCTGGTTTTCTAGCATCCTTGAAAGTTCAAGTACTCCTATGGTTTTGCTTTGAATGTCTCTCCACTGAGGCTCTGGTACTGACCTGGAACACACCTCTCATGCTTGATCTTTTTGGTGTCTGGGTTGGAATGAGTCTGAGAGAGGCTACACAAAAGAGGTAAGTGTCTGGGTAGAGAGGAAGAAAAGGCTGGCAAAGGCTAAGGCCAAGGGCCCCTCAGGCATAGAGTAGAACAGAGGCCTCTGTGGTAAGTTCCACCAGTCAGGGATGGAGATACAAAGCCTGAGTACTGTTCCCACAGGAAGAGCCTCTGAGAGGGATACTGTACCCCAAAATGGAAAGCTGCTCCTGCCCCAAAAGCATGCTGTGTGAAGAGTAACAACGTTCAGAGGTTGCTGACACGAAGCCCCAGAGCCCTGTGATCAAAGGCCAGGAGGGCTGTCATGCATGCCATGAATGTTGACTACAGCAGAGCAACCCTGGGGTCCTGATCTGACTCACGCAGTGGCAGACACTTGGTCATCGTTGATAAGTGTGTTTGCCAGAGTCCATTGGAAAGATTTTTAAAAATGAAAACAAGGAATAAAGAACAGGAGGCTTGCAAGGATCTTAGACCAGGTTTGTCCTCTCTGGTTTTCATTTCCTCAGGGTCTCAGATCTTGTTTCCCCAACTGGGTGAGGAATGATGGCATTCACAGAAGGGCATAATTGCTGAAAGAACCAGACCACAGAGGAAAGGTGTAGAAGACCTCTAAAGGGGACAAAATAAAGGGAGGCTACCTCTGAATAACGTGTTGTGATCTTACTCCGTTGTGTTCCTGAGAAAATGGTTTGAACTACCAACACTCATATGACTCCAAAGTCAAATATGTGGCTGAATCCACCTGCACTGTAGTAGGACATCCAGCAATTGTGGTAAACACCCCGAACACCAGTGAGGGGGTGGCCCTGGTTACATAAGAAATAAAACTCGGGCTGGAGAGACAGCTCAGCAGTTAAGAGCACTGACTTCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCACCCACGTGGTGGCTCACAACTATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATAAAATTAAAACAAATAAATCGAAAGGAAGCAAGGAAGCAAGCTCAGGGAATATCTATGGGACAGAGGCATGAGTGATCCAAATACCTGCTCATTCAATCGCACATTCAATGCTCACACTCAACACTCATTTACTTACACTCACACTCACACATGCATATAGGCTTACCTGCTCTTTCTACACACACACACAGAGAGAGAGAGAGAGAGACAGAGGCAGAGACAGAGACAGAGAGACAGAGAGAGAGACAGAGAGACAGAGAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAGACAGAGACAGAGACAGACAGAGACAGAGACAGACAGAGACAGAGACAGACAGAGATTCACACATATGGGGGATTTACACACACAGGGACAGAGAGGGAGATTCACACACACACACACACACACACACACACACACACATCCTTTTGAGACACAGCAAATGTCACTGTTCTTTGTATCTGCACATCCTACGAACAGGAGCCCATGTTCCTTTCTTTTTGATGGTCCCAAGACTATCAAAGCACAGTGGCCAAACTTCCAAGTTGTGGCCTTGGCTTTGTCATGGGAAAGCATGAGGTGTATAAGTGGTGACCAGAAATCACCCACGAATGAGGCAGGGCCAGAGTATTAGAGGCAGAGGTGTCCCTGGGACAGCTAAGACCAGGATCTCACTGTGGTTTAAGATGTCCAGATCTGGGCTGCTGATGTGAAGGTGAAAATGCAGTCCTGAGGCCGTCAAGATTCATATCTCCTGGAAAACTGCAAGTAGTGTGGAAATTGTCGAGTGTGAGCTTGTGAACTCATGGGAGTCAGAGGCCAAGGTGCAAAGATTGACAGGGCTGCTTCTACAGCAACAGAGGCTGGGTCACCCCAGGAAGATGGAGCCTGGGAAGAGTTACCTCCTACTAGGAGGGCTATAAGTTCATCAGCTCCCAGAAGTGACAGGAAGAAGCCACCAAGGAAGACCCATGGAGAAGGGCCTCTTCTGTGAATCAGGCCTAATGTGAGTCTGAGGACTGACAGGGCTGTTGGTATACATTCCAGGAACTTGTGCTTGAGAACCATGGCCTAGGCTTGTGAAAGAAGATTCCCGAATCTGGTCTGGCCAAGGACCTGTGTAGGTATTAACAAAATAGTCACTTTCAAATTCACCCTGCCGAGACACAAGAGGACCTGCTGTTTACAGTGCAAACCATGGTGCTCCTTGGGCTACCTAACTGCAGAGTGGGTGGGAATGGTTACTTGAATCTTTGTCTTTTAAGTTCACAGTGACTTCATTTTCCACCCATTGGCTCATTCACTGAGCAGGAGGCCAGTGATAGGTAGTAAGAGTCACAGTTGTATCCTAAGCAAGCCTAGAGAACTTCCCAAGCAGTGAGTTTCCAGGGCCCCTCTGGGTCAAGACACAGGTAAGACTGTTCACAGTAAACCTTGAGTAACACACCATCAATCAGTGTCCTCCTGGGTTCAGGGCCAGTGGGGCATCCTGTATGAATTAAGCTTGAAGTGTTTATGGTACCAAATCTGAGTGGATCCCAAGGCTTCTGAGGCCAGACAGGTAGGGCCAACATGTGTTTTACCCCTCCAG
Seq C2 exon
GTGCTTCTCTGGTCAGCCAATAAGGTATTTGAAGAACTGACAGACATTGAAAGACAGTTCCACAAGGCCTTCTACACTGTCCGGGCCTATCTAAACTGTGACCGGTACTCAGTGGGCCTCCTGGACATGACCAAGGAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000000065:ENSRNOT00000000077:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0159021=GAF=PD(8.0=40.0)
A:
NA
C2:
PF0159021=GAF=PU(18.0=68.1)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Cow
(bosTau6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]