RnoINT0138566 @ rn6
Intron Retention
Gene
ENSRNOG00000028879 | Slc4a8
Description
solute carrier family 4 member 8 [Source:RGD Symbol;Acc:735164]
Coordinates
chr7:142397371-142414485:+
Coord C1 exon
chr7:142397371-142397575
Coord A exon
chr7:142397576-142414403
Coord C2 exon
chr7:142414404-142414485
Length
16828 bp
Sequences
Splice sites
5' ss Seq
CAGGTGGGC
5' ss Score
8.07
3' ss Seq
GCATATCTGTTTTTAAACAGAGA
3' ss Score
6.7
Exon sequences
Seq C1 exon
CGGGCTGATGGCTATGAAGGTGGCGCCGGTGGATGGTTGACCGGTCGTTGGATCCAGGGTAGGGGTCGCCGCGCGTGCGATCGGCTCACACAGGACCAGAGGGCGCGGACTGCTGCAGCTCAACCTGGAACCCACCAGCGAGACCAGGCTCCGCCCGGCCATGCCCGCCGGGAGCAACGAGCCGGACGGCGTCCTCAGCTATCAG
Seq A exon
GTGGGCCCCGCCTCCCGCTCCTCCCCGGCTCAGCCTGGGTCCTCTGCCCACCACCCGGCTCCTGCCCCAGCCGGGGTTCCAGGCGTGTCCCTGAGGGTAGGGGAGGCTCGCGTGGGACGCCAGGGGGCGCTCCGGGTGGCCGGGGAGGGTGACCTTGGGCCGAGCCCGGAGCCGCGGGCACTGCAGCATCCCCTGCGTCGCCTGCTGCTCGGTGTCCCGGAGCAATGACCTCTGTCCGCCGCTCCCTGTTGGCCGCAGACGCCGGCTTCTGGCCTTGCCTCGTTATGGTGTAGGTGGAGAGGGAATCCAGGGACCTCGCGCGGGTCTTTGTGTTTTGACCCTGGTTCCTCAGTGGCACAGAGGAAACCTTGCAAAGACCGGGAGGCTGGGAACAGCCCCTGAGAATGTGACCGGCTTTGTGGATCCCTCCCTGCTGCCCAGACATCAGACAAGTTCTGGGTAGGGATGCACATGGACCAGGGTAGCGGTGAGGTGTCAAGAGCGACACCACCAGCCTTAAATAGTTGATAGTAGAATTGCAGGGGTGGCTAATGTTAGGAAGCATCGGACTAGGGTCTGGGGGTTCAGTTTCCAACCTGCTTCTCATGGTCTTTGAGATCTATGCGAGCTACCTGCCCCCTTCGGGCCCCGGTCTCCCCGTCTATTAAAATGGGAGTATTGGTACGGTTTACTTCACAAGGCTGTTTTAAGGACTCTGAAACACAGTTTATCGTGTGATATCCAGTGAGTCGTAGCCCTTTTGAATTATCACACTGGCTTCCTTGTGAAGCCGGATCAGGTGTGGTTACTGCCCTGCAAAATGAGGGTTTGAAGGAGGGAAGGGGGCTGAGACTAGTACCGAGGCAGGAAGGGTGGCGGGCCTTGGAAGCAAATGCCAGGAGTGGCTTCTGGAGGAGGCATGGAGAACTTCCTGTGTGTCGTGAGGTGGGCATGACCCTCCCTGCCCTCTTCCCGGCAATAGCCTTTGCTTTGTCACAAATGTATGATCACAAATATATGACCTAAGATTTTGGAAAGCCTTTCCACATATGATCTTATGACATGCTGTGGTATAGCCAACCTCTGTTTGGGAGACAGTGAGTCAAAATAGGCCAGCTATTTTGGTGGAAAAGGAGGGGAATTAGCGCTTTTTTATTGTTTGTTTGCTTTACCTTTGGTGGTTCTAGGGGATGGACTGCCTTCCACTTGCTAGGCAATGTGGCTCTACCACTGAGCCATTCCCTGGCCTGAAGTTAAGAATTGTGTGTGCATGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGTCGGAGCTTGTCATCTGGTTTGCACTTTATTTACTCATACATGTTCTTACCCTGAACATCAGCTGGTGGGTGAGCCCTTGGGACCTGCCTGCGGTGTCCCCACCTCCCGTCCCTGTCCCTTTCCATCCCCCCCCCTCAATGCTGGCCTTTGACACGGGTACTGGGAGTCTGGATTCAGGTCTTCATGCCATAACAAAACACTCTCTACCTTTCCCTGTTTCCCAAAGTGAGCCGTCTTAGTTAACCACACAAAACACAGTAGTCCCAGTACTGGCAGCCTGAGGCAGGAGGATGGTGTGCTTGAGGTCAGCATAGACTATTATAATGAGGCCCCATCTCAAAAAAAAAAAAAAGATTCCGCATGAAGGAAATGTGTCATTATAAACTCAGGTGCTTTGGCCAGTCCTGTGAGAGCGTGCATGACTCAGACCATGGGAGAGTTTTCTAAAGAAGAAAATTTGGGCAAAGGTCTGGAGAGTGGGTGGAAGAACTCGGAAACAGGACAGGATGCTCAGACGTCCTGTGGCAAATGTGGAACACGCTCTGGAAGGACAGCGTGGTGCAGCCCCAGCAACGGGGGGAATGTGAGGTGTGTCCTGGGTTTGAAGAAGCTGGCATTTGTCCAAGGACTAAGAGGTGAGGGGGTGGGGAGGTGAGTTAGGAGAGAGGGCTCAAGAGACAAAAGTGGGCTGGGGTGTTGTGAGGAGATCTGCCTATAACATGCAGACTTTGCGCAGGCTGTATCAAGTACACAGTATCACTTGGGTTCTCCTTCGTGTCCGCTGTGCACATAGTGGGGATGCTCTCTATAGTGAGCTACAACGCCTGTGTGGAATGGGCGGAGAGAAGAGACAGAATAGGACTCCAGAATGGAGTCAGGCGCCGGATACAGAACTTGAGATCTAGGGAGGAAGGAGAATGAGGGGGGAATGGGGAGGGCTTGAGGGGACAGTTAGCCATGGGCAGTCACCTTAGTGGCCAAGCCTCCTGTGCCCACCTGAGACAGGACCTTGCAGAGCCGGTGGACCGTGTGAGCGTTTGGAAGCAAAGGTCCGAACACCACAGTCGCACACCCTGAGTCTAGACTGTTTTCCTGGGACGGGCTCCAACCTGGACCTTCTGACGTATCTGTGCAAAGCTGCCCCAATTCCAGCAGCCAGAGGGGGTTTAGAAATGCAAGCCTCATCGTGCCATGTCGTATCTCAAAACCTGCCAATGTCCTCTTGTGCAATTTAGAATAAGATCCAAACTCCTCCATGACTTACCAAGGTTTGACATGGCCAAGGAAGGCTTCACCCAGTGCCCCCAGACTGCGCTGTCTGGCCACGCCCTCCAGCCCTGGCTTGCTTTGCATTTCCTTGGTTTGACAAGCTCCCTTGCAGCTGTAGATCTGTCCTCTTTCTAGGACACTCTCCTCCTCATGACTCACTTGGGTCTCCTGACCTCCACCCCTGAGTCAGAGATCTCTGCAGGATTCAATTCGCTTTCCTTCCCAGCACTTGCCTGTGAGTGTGCTTGTCTTGATATCCTGCTGTCTCTTTAGTTGGAAGCTTCAGGAGCCAGGGAAGAGGCAGACGGTTCTGTCTAACCCTGCCTGGTGTCCAGCCTGTGCTCGGCTGCTGTGAATGAACGAACAGCTTGCGGGCCCGAAGCGGAAGTGCCTCTCCTTCAGGGGCTCTTGGTCCGCTAGGCAGGATTTGCACGAAAGGATTTGTGGGCGGTCAGTGGCCCACACACACACTGTACCTTTGTTCAGGTTAGTGAGCCACAGGATCTTTCCCCTCCCCTCCACTGAGGAAATTCCTTCCTGACCTTCCAGGCTGGCTCCGTGTGGCTCTTCCAGAACTCGACACTCAGGCTATCTGTTGGCACCACCTGCCATGGGTTCTCATGTCTTCACCGCTTGTGGACCATGCAGGCTCCTTTTTGCATTTACTCCATGCTCCCCTTCATTTGCTAGCGTTGCCTGCCTTCCACAGGCGCCAGGCCCCAAGGTAGGCCCTTTCCGTCACCTCACGGTCACCTTTTCTTCTTTAGTCCCAGTGCTGAGGTTGAATCAGGCCTCACTCTGTGGCCAAAGCACTCCGTGACCGTCTCCTACCCCAGCTTACCTTTTCTGTAGCTCTGAGAATTGAGCACCATTACTGTTCCTGTTTCTCAGATGAAGAAACTGAAATGTAGACTTCTGGAAGGGCAGAGCCACCTCCCTCCATCCCTTGGCCGTAACCTCCTGTTAGAGCGCCTGGCCCTGAGTGAGCCCTTCGAGGTGCTTGGGAAAGCCTGTATCAGAGCGCAGCTCCCTGGAGTGGGAGTGGGGGCTGGCCGGAGGCTGAGTTAACAGGTTAACTTTGCTACCTCTCTGGAGATGTTGCTGGAATTTCAGGAGTTGATGGACTCTTTAAAGGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTCTGAGTGTGTGTCTGTGTGTGTGTCTGTGAGTGTGTGTATATGTGTGTGAGTGTGTGTATATGTGTCTGTGAGTGTGTGTCTGTGTGTGTGTGTCTGTGTGTGTGTCTGTGAGTGTGTGTATATGTGTGTGTGAGTGTGTGTATCTGTGAGTGTGAGTGTGTGTGAGTGTGTGTGAGTGAGTGTGTGTTTGTGCGAGTGTATGTGAGAGTGAGTGAGTGTGTGTGTTGCAGGGTGGGGGCACTAATGGAGGGAGGCAAGGAAAGCCCCAGCTCTGTGCTGGACGAGCTTACAGCCTCATAGTTCTCCTGGTCAGCACTTGCAGACCTGCCCAGTGTTGAAGAGAAACCCAGGAGGTTGGACACCTTAGGATCTGAGTAAGTAGTGCTGGGCCGCTCTGGGCCACCCAGGGAGTGCAGGGGCAGGATTGAGGGAAGCAAAGAAGTCTGGCTCACTTAGCAGAAATCTTCAGAAAAACGAAACCTGAATCCCGGAGCTGGGCACAGGAGTAAATGACTGAGACTCCCAACACCCTGGAAAGATAGAAGCGTGCAGGTGAATAGTTCAAGGTCAAGGGGAGATGGATCAACGGATTGAGCCCTTCTGTACAAANGNNTNGCCCTGACCATTTGAGTTTGAACCGTCCACAGGTGAATGGTGGAGGAAAGGAAAAGACTCCACAAAGTTGCTCCTCTGACCTCCCACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACACATACACACAGACACACACATACAGACACACAGACACACAGACACACAGACACAGACACAGACACACAGACACACAAACAGACACAGACACACAGACACACAAACAGACACACACACAGACACACACACACACAGACACACAGACACAGACACCGACACACAGACACACAGACACACACATAGACACATACACACACACAGACACACAGACACACAGACACACACACACAAGCACACATACACACAGACACACAGACACAGACACACACACACACAGACACACACACACACAGACACACAGACACACACTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCACACACACACACACACACACACACACACCCATGCACACAGGAACCCATGGTGGTATGATACTAAGAAAGACAGGTCAGCAGTTAAGAACACTAATTGCTCTTGCAAAGCACCCGAGTTCAATTCTCAGTACCCACATGGTGGCTCACAACCCCATCCACGGCCTCTGGTACCCTCTTCTGAAACCAGACACCCGTGTGTTTCACACACGCAAGCAGGCAAAACACTCACATGCATAGATAAATGTAAAAACAAGTTCACAGTCAATCTTGGCTGCATAGAGTTCCCGGCCAGCCTGGGCCATGGGAGTCTGCCGCTACACCAACGAGCAAAGGGAGAACGTCAAACCCTGGTGTGAGGGAGAATGTCAAACCCTGGTGTGTGGCAGTAACTGAGGAGTCCAGTGGAGAACGAACCTCACACCTGTGTCTTATGGTGGACCTGAAGCAAACTCCCCGGACAAGAGGTCCTGAGGTTGGTTTCTAGTGTTCAGTGGCTTTGACACAAGGAGCACAGCACATATTTGCTGGGAAATGAATGGTGGGCTCGGTCGATTGCTGCCCCATTCCTGAAGGCCCGGGGCAGTTGATGGTAAGTAGGTGATGAGTGTTTGCTCAACGCCACTAAACAAAACCCCAGTTCTAGACGGAGGTTTGCCCCTCACTGCCTTGCAGTACAGTGTATAGCCGTTCACCCTCCCAGCACATGGCAGGGGTACGAGAGCCTTCGGGTGCTTCCTCTGGGCTTCGCCAGCTCTGCTGGGCAGCTCTGTCGGAGGGCTGTGGGCTGACTTGCTGAGCAGAGCCTGTGGCATAGAGCAAGGGGCAGCTGAGGCTCCTTCAGAGCTGCAGGAAATCCTCTCAGTGCTGTTTGCCGGGGCAGAGAGCAGCCGTAGTCGTTGTCAATGTCTCGGTGATTCTCAACCGCTGCTAGGTTACAGCCACGCCTTAGGTAATGGGGCCTCTGGTCATTTCCCACAAGGTGGGAAGGAGTTCACGCTGGCTTCGATAGTTAGGGAGTCAGACAGACTCTCTGTTGCCTCCTGTCTTGTTAGACGAAGCCCTGCCCGCCCCCTTTGACTTATTTCTTCCTCTGCTCTGCCTGCTTCAGAGCCAGAAATCACATCTTTGAGGCTCTGGTTTTTCCCCTCAGATCTTCCTCTCCAACTTTGCTTTTCTGCCTCTTGCTTCTATGAAAGATTTTTTTTCTTTTCGGAAAATATTTATGTGGATGAGTGTTTTCCATGTATGTACAGTTACCACAGAGGCAGGAGAAGGCATTGGATTCCCTGGAACCGGAGTTACAGGTGGTTACGAGCCACCACATGGGTGCTGGGAACTGGACCCAAGTCCCTGGCAAGAGCAACAAGTGGTCCTACCCTAGGAACCATCTCTCCAGCCTTTATCACCAACCCCTCCCCGCCAAAGAAAGGATCTTCCTATGTAGCCCAGGCTGGCCTTGAATCTTGCTGCTTCAGTTTCTCGAGTGCTGGACTCTAAGCACGCTCTGCCATGCCCGGCTTCATGGTGCCTTTAATCACATACGCTTCCTTTGCAGTTTGCATGTTTTCCAAGAGTCTTATTGGAAGATGAGTTGATCAGTAACATGATCCACTTTATCGGTACTCTTAATTCTCCTCTGCCGGTTAAAGTCACAAAGTCTGATGTCACTGCAGCTTAGATATGCGTTTCTCCGGGAACATTACTCTCCAAGCCTATGCTAATTAGGGGTGACTCGAGGTGGGGTTCAAGGAAAGAAGCACAGAGCCACTGCGCTGTCTCATTTCCCAGGCGACTGGAGAGCGGGAGGGGAGCTCACGGCCAGTGACTCCTGCCACAAGGCCTTGTGGAACACCTTTTCTCGTGGTCGGGTATCCATCCGTAGGTATTGAGGAAGTAACTAAAGGCACTCAGACATGTCCAGCCTTTCGACCTTGTGACACCGCGTTGTCCTCGAAAGTTCACTCTTGAGAACCGCATAGCTCCTGAGTTACCAAAGAGATCCTATCTTTGGCTTTATCTGTCCCAAGCCAGAATGAGAGAGGAGCAGAGATCTGGGCCAGACTTGGTGACCAGGGCTCCAAGGGGCCAGGAAGCTGGTGCTGTGCTGGGCAAAGAGGCAGATCGAGAGCAACTGGAGGGCGGGCGCTGAGAAACAGGGCGCTGGGGTGTGTGAGGAGGAGCACTGACTGCTCGAATCTCATGCTGTTCTCGCCGTGGGCAGTATTAACACACAATTATTAATACAACTTGAGCCTTCCTGCTTTCTCAGCTCTTGTGAGCTCTTACTTAGCTCTGAGTTAAGAACATGTTGAAGATTAGGCAGGGTAATAGCTACAGCACAATCAGAGGCTTAAGTAAGTATTCCATTGGAGTCACTCACCAATTCTAGTTGTACCAACTTCTTTTGCCAACCGGAACCCCTGAGGTAGGGCTGAGGGGCACCCTGTGCAGAGGACTCACCCCGGGAAGGTGGAGCTGATCTCTGCAGTGCTGATTTTAAGATGTCAGAATACACCTGTGCTCAGGACTCTGTGATGCTGTCTTCTTGTTCTGGTTGGCAGTGAGGGGTGGGTGGGATGGGAGGGTTTACCACGACCGAAAGCATTAGATCCGTGGGATGTGGTGGGGAGGGAAAGGCTTGTTTGAGATAAAGTTTGGAAGGGTGATGGGGTTTATCTGGGCAGGTCCATCTCCACAGATGGGGCAGCAGGGCTCTGTGTGGCTTCTGCCTACAGCCCTCATCCTCTGCTGCTTCTGGGCCATGTCTTGGCATTGGGAGCATTACGTAAGGTTCAGTCCTGTTCCTGCCTTTTTTTTTTTTTTTTTTGGTTCTTTTTTTTGGAGCTGGAGACCGAACCCAGGGCCTTGCGCTTCCTAGGCACGCGCTCTACCACTGAGCTAAATCCCCAACCCCTTGTTCCTGTCTTTTATTGGTCATTCCTGGAAGTGAGACTTTGATTTGCCATTCAGATCTGACTCTTTTTTTTTAAGCTAACTAATTAATTAATTAAAAAAATTTTTTTTGGTTGAGACAGGGTCTCACTTTGTAGCCCTGGCTGGTCTGGAACTCAATATGTAAACCAAGTTGTTCTTGAACTCAGAGATCTACGTGCCTCCTGAGTGCTGGTGTTAAAAATGTCACTATCTCCAGTTTCATTCATTGTCTTTAATAGTATTTTTTGAAATTATAATATGGGGGTTGGGGATTTAGCTCAGTGGTAGCCCTGGGTTCGGTCCTCAGCTCTGAAAAACAAATTATATGATTATAAAAAATTATATGATTAAAAAATTATTTGATTATATTATCTCTCCCTTTTCTTTCCCACCCCCCAGCACCCACCATGAACCCCCTTGCTCTCTGTCTCTCTGGAATTCATGGCCTCTTTTCCTTTACTCATACATGCATACACTTGCATACCCATGCATAGACATGTACACACACGTGCATGCACATTCACAGAGATATTCACACATACATACCACACACATACACATACACATGTATAGACACACATGCACATACATACATATGCACACATGTATACACATATCACACACATGTGCACACATGCATGTACATATATGGGAACATACAGATATATACAGACAGACACACAGGTACACATATGCACACATATACCACATACATGCGCATACACACATACCACACACATGTGCACACACATGCCTGCACACATACATGCACAGACACAGACCACAGACACACACAGAGATACACATGCACACACACGCGCACACACACACACACACACACACACACACACACACACACACACACAGAGTCCTAAATATATACTTACAACCTGCTTAGCCCACAGGTTACCTGTATGTGAGTGCTGCCAGGGCACTTTGTATTGGATCACTAGTTGGCGGGGTCTTCCCTGAAGAAGACCATCTTTTAAGTTTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCTTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCTTCACTTCCATTTTTATTTATGTGCGGGTGTGTGTGTGTGTGTGTCTTTGTGTGTGTACATGTGTGTGTGTGCGTGTGTGTATGCGTGTGTATGCGTGTGCGTGCGTGTGTGTCTTTGTGTGTGTGCGAGTGTGTGTGTGTGCGAGTGTGTGTGTGTGTGTTCCAGTGCCCGTGAACACCAGGAGAGAGCATCAGTCCCCTGGAGCTGGAGTTTATGGGTGGTCGTGAGCTGTCTGATGTGAGTGCTCAGAACTGCACCTTGGCCCTCTAAGAACACCCAGTGCTCCTAGCAGCTGAGCTGCCTCCAGCCGTGCGATTTCAATGCCTTGATGTGAATTAACACCTCCGTTCTTTTTATCTAGTCTCTGGGACCCTCCAATTCATGTTTAACAGGCAGCATCATCAATGAGTCACCGGGAGGGAGTATGGAAAGAGGCGCATTTGTAAGGACGATTTCTCTCTAATTCACTACTCTCTCTCGCTTGCTCCCATCCCTACTCTCTCCTGAGCCATGAGCTCCTCTGAGAATCTGGTGAAAGCTATGAACTGCCCCACACCACCAAATGCACATACAGCCGTCTCCCACTCTGGTGGTGTCCATTCATCGGTATCCTAGAAGGTCACGGACTCCACGTTGGTCAATCTTGCTTCCTGTGAACGGTGATGGTGGTAGAGGCAAGCATAGCCATCCTTTGCAGCACCTGCTGCAACCATGGACTGACCGAGTGGTTTGAGGCTTCCTTTCCAGTTTAACAATTTCAAACAAACTCGGCATGTGCTTGAAAGTTGGGGAACATTTCAGATGTACAGCAAGGAGAGGTATTTGCATAATGAGTCATCCCGTATCAATGACTGGGTGTCTGCAGTGAGCACACAGACCATCGTGTCTCCCCCGTTTCCCTCTGCTCTCCATGGAGCTCACGGGTGCACACGGCTTATGGGGGTACACAGGGCTTACAGGGGTGCACACGGCTTACAGTGGTACACACTGCTTACAGAAGTGCACAGTGCTTATAGGAGTACACATGGCTTACAGGGGTGCACAGTGCTTACAGAGATGCACAGAGTTAATGGGTGCACACTGCTCACAGGGGTGCATGCTGTTGGCAGGGGTGCGTGCTGCTCACAGTGTAGGCGACTGTGCTGGGTGTAGGAGATGCTCAAGAAAGACAAATACATGCTTCCAGCTGTTAGGCGCTCATGGCCTACGCCAGGTACATGTGTTTAAGCAAAGCAGAGGCAGGTGGATTTCTGAATTCCAGGCCAGTCAGGGCTACATACTGAGATCCTGGCTTAAAAAGGAAAGCAAGAAGAAAGGAACTCATGGACAGAAAGGTGAGCAGAGCAGGTGTTTGTTTTGTTTTGTTTTGGTTTTGGTTTTCACTTAAAAATGGTTCCTTGTCGGGTGGAGAGATGGCTCATTGGTTGAGAGCTCTGCTGGCTGCACTTGTAGTGGACCCTGGCTCACCAAAAGGCTGCTCACAACCATCTCATCTCCGGTTCCAGGGTATCTAATGCCCTCTTCCGGCTTCCCCCAATACCAGGCACGCATGTGGTGCACAGATATGTAGGCAAAACACCCTACACACACATAAAAGTACACGTTAAAAAAAAGGGCTCCTCAGCTGTGGTGTAACTCGCTTAATGTGCAAGGCCCTAGGTTCGACCTCCAATACAGCACAAGGGAAAAGGAGCAAAAGATGGTTCTGTAGAACTCTGTGCAGAGTAGCTGGAAGCAGAACTGGTGAAAACTGTTCATCAAATCTCAACACCGCTGGGCTGCGGGAGGGATGGAGGGTGCCTGAGGACTCTGAGTGTTGTGAAGTAATACTGCATAGGTCAAACCAGGCTTTCCTTCCCCTCCTCCTCCCTGCCCCTCTCCAGGGTCTTCCTGTGTAGACTTGTTGGCCAGCCACTACTCACTGTATGGCCCAGGCTGGCCTTGAACTCACAGCTGTCTGTCTGCTTCATCTCCGATCACACTATGAACTCTGTCCGAAAAGACTTCAGTGTGTCTGTCTCTAAACTGTGTTGTAGAGGCCTCTGCCACGCCAGCACGGCATGTAAAGGGGACAGGCTCTCCCGCTGTGTCCTGTCAGCATCCACATTTGCCTCCACATGTCCACACGCCTTGTTCATCTGATTTCTAGAGACTTTGTAATATAGAGCTTTATTTTCACAGTATAATCCAGAAGGGACAGGACATTCCCTTACAGTCCCTCCTTGCCCTCCATTATGGTCGTCGTCCCCTACGAGCAGCTCTCATAGCTTACGTTAGGGCGGGGTCACAGTGGTGTACCGTGCCCTAAAATCCTCCGTGCTTGACTTTAAGACCCTGCCCCAGACCCTGGGGAGGACTCTTCAATTTTAAGTCTCCATAGTTTTGCCTTTTCCTGAATGTCAGAGGACTGGGATTATCCAGTACATAGACTATTCTTCTCTTCTTTCCTCTTTTTCTTTTTCTTAAAAGAACTTCCCTAGAACTAGTGATCCTCCTGCCTCAGCTTCCCTAGTTCTGAGATTACAGTTTGTGTGTTCTTCTAGAGGGACGTCTCGGTGGCTTTTAAGTATTCAGCAGTGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAGCGTAAGGCCCTGGGTTCGGTCCCCAGCTCTGAAAAATAGAAAAGAAAGAAAAAAAAAGTATTCAGCAGTTAGGAGCAGAACTTCCATGAACATCTACGTTCAGGATTTCGTGTGGATTTAAGTTTCGGTTGTAGTGGTAAATACCAAACAGTCTATTACGGAATAAGAATGTGTTTCGTAAGAAGCTCTTCCACCGTGACTGCAAATATTTGCCCTTCCCAGGCAGCACTGAGAGCTCTGTTGTTTCTCTTTCTCGACACTGTTGTAGCACACGGTGCCCTCAGGTGCCCAACACCATGGCTACAACCAATAGTGCGAGTAAAGGCTAGACCTGACCGCTCACGTTAACTCCTTACACACTGAGAGGCCAGCCTGGGCTTCAGAGCGAGTTCTAGACCAGCCTGAGCTTCAGGGTGTTGCTTCTCAAAAACCAAAAATGAAAGAACAGTTTGTGATGTTCTCTCTCCGTTGTTCCGACTGGGGACGCCGCTAAGGATGGTTGGACGCTTTGTCCTGATTTCCCCTCTGTGGTACGCTTCACCGGGAACTGAACTGGAGCCCTCCCCGGCCTGCTCCCGTGCAGTGCTGCTCAGAATAGATTCTTCTGAAGTCGGCACACAACCAGTCTCACATCTGCCTCTGCTCTGTTTTTTATTTTGAGAATTCCTTTAAAAAAAGATTTAATTTATGTGTGTCTGTCTCTCTGTCTCCCTGTCTCTCTGTCTTTCTCTGTCTCCCTGTCTCTGTCTCTGTGTCTCTGTGTCTCTGTGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGGATGCTGGGAATCGAATCAACCACTGAGCCATCTCTCTAGACCCCTTTCTTGTAAAGTATAGCCAAGCATTTATATCCCATCTCCATTTCTCCGACAAAGTGTAGCAAGTCACAGGGTTGTTTTTTTTTTCCACTTTGCTTTTGAAACTTGATATTCTATCTTGGGAATATTTTTCATTGTAGTAATAATATGTATTTTTAAATATCTATGAAAGTAAATTATCAAATTAATTACTCTAACTGACATTTGACATTCTATTTCTCTAAAAAATTTATTTAACTTCGCCTCGTTAAAAATACTTCTCACTGTGGACCGATTGCCTGTCTTCAGCGTTGTGTCATAGAGGAACAGGGCGAAGTGTCTTGAGAGAGTGAGTTGGGCATCTGAGCCATACCAGGAGGGAGGGTGAGGACCTGAAAGTAAGTGTGGACCGTTGGAGGTGAGGATGTGCCCATCTCCCTGGGGACAGGAGCTGGCCAGAGCCGCACACCAGGAAAGGACAGCTGCACCAGGTTACCAGGGAGTGTGCTTTGGCTTGGTAAGTCGGTGCCCTGTGAGGTGGGAAGGTGTCTGAAATCACAGCCACTGCTTAAAAAGACTTGCTAAGCACACATTATATGAACATTTCTGTGCTAGGTACGGGGCTATACTCTTTTGTTTTCTTTTAATTTCGTGGCGGGGTCTTACTATGCAGCACTGACTGACCCAGAGCTTGCCGTGTAGACCAGGCTAGCTTCTGCCTGAGTGCTGAGATTAAAAGCATGGAATACCACTCCCGGGTTGCTTTTTGTTGTTTGTGTTTTGGAATTAGGAATCTGTGTGTGGGTATGCATGCCTGCATGAGAGGGCCTCAGATCTTCTGGAGCCGGAGTTACAGGCTGGAAACTGAACTTGAGTCCTCTGCAAGAGTATACACAGTCTCTAACACTCAGCCATCTCTCCACACCCCCAACACGTGTGTGCGTGCATGTGTGTGTGTGTGCATGTGTGTGTGTGCCTGTGTGTGTGTGCCTGTGTGTGTGTGCATGTATTGTGTATGTGTGTGCATGTATGTGTGTGTATGTGTGTATGTGTACGTGTGTATGTGTGCACAAGTGTATGCATGAATTGTGTATGTGTATATGTGTGTGCATGTATGTGTGTATATGTGTGTATGTGTTTATATATGTGTGTTTTTATGTGTGCATTTGTGTGTATATATGTGTATATGTGTGTATGTGTGGTGTCTGTGTATATATGTCTGTGTGGTGTGTGTGTATGTGTGGTGTGTGTATATGTGTACATCTGTATTGGTGTTTAATGTGTGGTGTGTTATGTATGGTTTTATGTGTGTGCATGGCATGTATGTTTTATATGTGGTGTGTGTGTATGTGTGGTGTGTTTGATGTGTGGGTGTGTTGGTAATGAATGTGCATGTATGTGTGATGGTGTGGTGTATGTGTGCATGTGTGTATGTGTGTGATGTATGGATGTATGTTGTGTATGTATGTGTATATGTGGTTATGTGTGTGTATGTATGAATGTGTGGTGTGTTGTATGTGGTGTTGTGGTGCATGGCTCTATGTGTANNNNNNNNNNNNNNNNNNNNNNNNNTACACATAGAGCCATGCACCACAACACCACATACAACACACCACACATTCATACATACACACACATAACCACATATACACATACATACACAACATACATCCATACATCACACACATACACACATGCACACATACACCACACCATCACACATACATGCACATTCATTACCAACACACCCACACATCAAACACACCACACATACACACACACCACATATAAAACATACATGCCATGCACACACATAAAACCATACATAACACACCACACATTAAACACCAATACAGATTACACATAGAGCCATGCACCACAACACCACATACAACACACCACACATTCATACATACACACACATAACCACATATACACATACATACACAACATACATCCATACATCACACACATACACACATGCACACATACACCACACCATCACACATACATGCACATTCATTACCAACACACCCACACATCAAACACACCACACATACACACACACCACATATAAAACATACATGCCATGCACACACATAAAACCATACATAACACACCACACATTAAACACCAATACAGATTTATTTAATGTGCTCTGGGTCTTGGCTACTCACAAAATGGGTAAGACAATGGCCGGTGGCATATTTGCATCTCAAGGCTATTGTGTGGTTCCAACTAAGAATATACATAAGCCACCTCTAGGTATCTCGGAGCACCTTGGTATACACTGTGGTTCGAAGTATTTGAATGAATGAATATTTGTATTTTTTGTGACTATTTATTTGCATATCTGTTTTTAAACAG
Seq C2 exon
AGACCAGATGAGGAAGCTGTGGTGGATCAGGGTGGGACCAGCACGATTCTCAACATTCACTATGAGAAAGAAGAGTTGGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000028879:ENSRNOT00000040890:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.821
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]