RnoINT0168233 @ rn6
Intron Retention
Gene
ENSRNOG00000050562 | Zfp449
Description
zinc finger protein 449 [Source:RGD Symbol;Acc:1584453]
Coordinates
chrX:73397443-73410782:+
Coord C1 exon
chrX:73397443-73397647
Coord A exon
chrX:73397648-73410668
Coord C2 exon
chrX:73410669-73410782
Length
13021 bp
Sequences
Splice sites
5' ss Seq
CTGGTAAGA
5' ss Score
9.45
3' ss Seq
CCCTTTTGCTTCTTGACCAGGTT
3' ss Score
8.42
Exon sequences
Seq C1 exon
ATTGACATGGATGACATGCTCTTGGAAGAACTGGCACCAGTTGGAACAGTACCCATGCCACCCAACTTGCATCTGGAGGAACCTTCACTCCAGGTGATGGCGCCTGTTCAGGAGCCCCCAGTGCCAGATGCCTGGATTCCACAAGCTGGGCCACAGGATCTGAACTACAGCACTGATGGTGAATGTCAGTCCTTTCTGGATCCTG
Seq A exon
GTAAGACAAGGACTTTCCTTTTAGTTAGGTGTTTCTTTTTGGGAACCAAAGAGCTCAGGGGCTTTCAGTTTGGGTTATAAATATGAATCTCCCAATGACACTGGACCACTGACATAAAGAGGTCATAAAGAGGCTGAGAACATGAGGAGGAATCCTCTTTTTCAGGAACACCGGGGAGTGAAGGATTTTGACTAGAATATCCTTGGGAGCTGGTTACAATGATGGCCTTGCCCAAGGGGATTTTCACCAAGGATGACTTGGGAAAGCCTCTCATGGGAGTTCAGATCCTCCAGTGTGGACACAATTGTCCATCACTTTTTAAGCCTAAGATATGAGACCCAAAGGAACATTTGCTTTTCTAGTATAAAAAGCCCCATTCAAGTAGAATACTTTGCAACATACCCTTCTCCAATCCTTAAAAATGATGCGGTCATTAATAGGGTGTGAAAAATAGTTAATGTAATGAAATCCCAAAGAGTGTTTGTAGAATGTGTTGAGAGCCACTGCAACAACTTAATCCAGATAAGTGCTGCACACACTGATATTTGAAGCCAGCTGGCTCTGACATAGCAAGGAGCTATGTCCCTTAGAGAAAGGCAGCTGGACCATGCAGCCCGCATGCCTTGGTGCTTCCCTTCCTTTTGGGGTTCCGTGACATCATTAGCCATGTTCTCCACCCTCTCTGTCCCCTTGTCCCTCATGAAAGATTTGGCTCAAGTGTGGCTGGAACTGTTATCTCGTGGGCACAGGTTCAACATGTTAGCACTTGGACTAAACTGTAGGGTCCTGAGACACAAAAGAGAACCAGAAGATGGAAATCAGTGTAACCAACCAGAGTTACAAAACGGAAACGCTTGGTGCTTGAACAAGTAGCATGGGGCTGAGGCCTAAAAGTCCTTTTTACAACGTTAGATTTATGAATTCGGCCGACATTAGGAGAATCTGTGAAGGGCCAGGACAGACACTGGGGATTGGTTGTTACACAAAGTAGAAAAGTAGCTTTGGCCACCCTGGAACTCAGTCTGGTAGGCAGTTGACAAATTCCATATGTGACAATAATGGCACATGGAGGAGAGTCACCTTCCCCCAGCTACGAGGCGACCAGACATTACTGTGTGTAGCACTTACTGTGTTAGGGTGATGCAGGAGGTTACCACATTCTAAAAACATTACTTCAGTTTGACTCTACATTACATTGACATTGGTTCACCACCCATAAAGTGACCGGATTCTTTTTGAGACTCAGAGGAGAGCATGTTTCCAAAGTATTCTACTTGCATGGGGCTTTTTTATACCATGAAAAGAGACCAGAAATCACTGTGTCTCCGAAGCTCCAGGGGCAAAAAGAATACCTGTATTTGCAGCTGGTGGACGGGGGCCAACAGGAGCCAGGAGCCAAGGTGGTGATCACTGAGACGGAAGAAGCAATTCCAAAAAGCTATTTAGCATGTGTAAAAAATAGGACTTGCTGACTGCAGTGGTTATATTGTGTAAATGAACAAGAAAGGTGAAGGATACCCACCTAGGTCTCTGGCATACAGAACCCAACCGAAAGACTGGCTCATGGGTCAAAGTAAGCTGAGATTTGACGCACATGAATTTGTAGAGCTGTGTATTTTCCAGAATTTATTTTATTACTTATTTGAGACACAGTCTCACTTATTCAGCTCTGTGTGGTCTAGAACTTGCCATTGTAGACCAGGGTGGCCCTCAAACCCTCCACAGAGATCTGGGCTTGCCTCTGATTCCTGAGTGCTGGGATCACAGTTATGTAGCACTATAGGCAAGCTGGAATATTCAAATGATGGCAAGAAAGAAAAACACCCTAAAGTCCATACTTTTATCATATTGGTTTGAAGCAATGCATATAGATATTACCATGTATTTTCTAGTCTTTGTATTATCTTTGTTTTATATTCGTGTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCTAGCGGCGACGAGGGCGACCAGACATTACTGTGTGTAGCACTTTACTGTGTTAGGGGATGCAAGAGAGGTTACACCACATTTCTAAAAACATTACTTCAGTTTGACTCTACATTACATTGACATTTGGCTTCACCACCCATAAAGTGACCGGATTCTTTTTGAGACTGCAGAGGAGAGCATGTTTCCAAAGCTATTCTACTTGCGCATGGGGCTTTTTTTACCACCTATACAAAAGAGACGCAGAAATCACTGTCGTCTCCGAAGCTGCCAGGGGCAAAAAGAATACCTGTATTTCGCTCTTGGACTGGGGGCCAAAGGACCAGGAGCCAAGGTGGTGATCACTGAGAAGGAAGAAGCAATTCCAAAAAGCTATTTAGCATGTGTAAAAAACTAGGACTTGCTGACTGGAGTGGTTATTGTGTAAATGAACAAGAAAGGTGAAGGATACCCACCTAGGTCTCTGGCATACAGAACCCAACCGAAAGACTGGCTCATGGTCAAAGTAAGCTGAGATTTGACCACATGAATTTGTAGAGCTGTGTATTTTCCAGCAATTATTTTATTACTTATTTGAGACACAGTCTCACTATTTCAGCTCTGCTGTGGGTCTAGAACTTGCCATTGTAGACCCCAGGGTGGCCCCTCAAACTCACCAGCGAGCATCCGCTTGCCTCTGATTCCTGAGTGCTGGGATCACAGTTATGTAGCACTATAGCAAGCTGGAATATTCAAATGATGGCAAGAAAGAAAAACACCCTAAAGTCCATACTTTTACATACTTGGTTTGACAGCAAGCTATATAGATATTACCATGTATTTTCTAGTCTTTGTATTCATCTTTGTTTTATATTCTTTTTAGAAATCTAAATCCTTGTGCAATGTATATTTGCCACTTAAATTTTAGATCGTACGCCATTCCTACTCCAATTATAAACCCACATTCTCATTCTTGATTCGCATGTGATCTTAATCGTTGTCCTTAATTTTGCAGGAAATAAGCACAGAACAGTGTATTGTCAACTATTCATATTCTTTTCATACTTTACTTCTAAAGCATATTGCCATTCAGGGCATTTGAAAAGCAGATATAATACATTAATGACATCCAAGTAAAAATAAAATCAAAAGAAATTATCCTGTAAATAATGTAAAAATGCTTTATAATTATCCCATATTTATTTAATAACACTTTTGACTTTTTTTTTTCCTCCTGGAGCTGAGGTCCGAACCTAGGGCCTTGTGCTTGCTACCACTGAGCTAAACAATCCCAACCCCCTTATTGTCTTTAAAAGTTACTTTACAAATTACTTAAAAATCTGCTTTTTTAAAAAATGAAAGGATCGTCAGTATTTTCACAATATTGGACAACGGAGTGAAAAAGCATTACAGACAATCGACCTAATGAAAAAATAAATGTAAAGAACACTCATATATAAACTCAGTTAAGGTCTACCCTTAAATCGTGGAACATACCGTCCGTAACAATGAACTTGGGATACCACACAAACACACACACCACACACACGCCCACCCCAGTCTGTAGTAACAACACCTCAGTCACGCGAAGTGAGACTTTGTGATGATCTATCGCCAACGTGGAGCTTAGTAAACTGAGTTTCCTGCAACATAGGATGCTTACACCGCATCCCCAAAGTACCTTATCTTTCTATAACCTCTGGTTTTTATCCTTCCATACCTCCCATTCCACTATAGATTCTCTCGCGCACTCAATCCCACAGTTATAAATCCCTCTAAGTCTTAAAGATTAACGCAGAAGATAAACTGAAGGGTGTGCTTTTTTTAAAAAGAATACAGTTTCTAAGAGTTGAAATTCAAGAAGGTTTACCATGCTCTGACTCAGTGCTGAACCATCACTTTCTTGTAATGAACCTCCCCATATGCGTGTCCTCTGACGGGAGATCAGAGTTGAGGTCCAAGGATGCTTGGTTATACACTTAAGTTTTTGGGTCAGTCGCCTGGACGACATAAAAGTCTTAGGAAGGAGGAGGGAGGGAGGGAGGGAGGAGGGGAAGGGAGGGAGGGATGGGAGGAAAACCATACAAATAGGGAATACAAACCTCTAGGATACTTTGCCTTTGGCCACTTTGCATTGAATTGGCTTTGGTCCACCTCTTACTTAGTTGCTTAAGGAGTATATCTGGGTGCGAGATGAACTACGCCAGTTTTAGTCTTCAGTGCTGTGATTCTTTCTGTCCCTCTCTCTTACTGCTTTCTGAGGTGATCTGATTGTTCAGTGTAGCATTCTACTTGCTTTTAAGAACACTCACTATGTCTAAGTTAATTCCCCAGTAGGTGATTACAGTTTACTATTCTGTTTTAGCTCATCTCAGTTCTGAGTTATACTGATAATGTAATTGAAATACCGCGCATTAGCTATATAAGGACTATATTCTTTACTTCTGGTACTATAAACAAGATTGCTTACTCCATCAGCACATTATATGCCACAATATATTGCTATAATTATCTACTATCAATAGTTTAAGAATCTTAATCAGACAACAACAGGAAACAACATTCGAGTTTTGTTTTTTACATCATTGTCCATTTTGGTTTTTTTTTCATTCTTCTTAGATGCCGTTTGGCAGGCCACCTAGCATTTCTTAGGCTTGGTAGGGGTTTTTCTCACCCTCACTCACACGATGCGTGTTATTGACAGATCGATTGCCTTGCTCCATGGCACCAGCTCGCATCTTTTTTTGAGAGGAAAGAGCAGACGGCTTTGATTTATAATTCTCCTAATTATACGAGCTACTTTCGATTTGGTGCTCGTTTTTCATACGCGAGTGTGGCTTTTAACTTATGATCTTGGAGCTTCTCCCGTTGCCCACTGCGGAAGAACAGCCTTGCTCATCTTAAATTATATTACCTGCCGTGTTCAGACAAGTTTGGCTAGCACTGAATTCTGTTTTTGTTCTCAGGGATATCTCCATTATCTTTTTTTCTTTTTTTTTTAAAGTTTATTCTAAGCCCTCTCCATGACACAGACACACCAGAAGAGGGCACAAAGACTCTCATTACAGATGGTTGTGAGCCACCATTGCGGTTGCCTGGGAATGAACTTCAGAACCTCTTGGAAATAGCAGTCAGTGCGCCTTAACCACTGAGCCCATCTCTCCAGACCCCCAATATCTCCATTTCTGATTACAAGACAGATGTTGAATGGAGAGCCTTAGTTGACAGTTTTCATTTTCTCTTCATGCAACTTTGACTGTGTCAACCGCACCCCACTCGCCATTTTAGGCCTCCCTTGCTTCCTAAAGTGAGAACGAAATTTTGCATCTTAAAACTAAATTGGTATAATTACAATCTCTAACAGTTTTGGAGTTTAATGTTTACTAAATTTACTCTCTAGCTCCCTTTAAAAATTTATAGTTACACTTCATCTTATCATATAAATGGTATGCTGTTAAAGATCCCTGACCTATCACATGTTTCCCAGAAATTAAACTGAGTCACCAGGCCTGTGCAGTAGGGGCTTTTACTGAGCCCTTATACCAGCCCCTCTGTTAACTTTAATCTGAATCCAATTTAAGTATTTACCTACAATTTGTGGGTCATTGTTTTCGTTTTTCAAACAGTTTTAACATCTCTCCTCCTCTCGTCTCTCGTCTCTCTCATCTCCTCTCTCTTCCTCTCTCTCTTTCCCCTCCTCCTCCCTCTCTCCCTCCCATCATCCCTCCCCTCTCCCGCCCACCTCTCTGCCTTGCTGTGATGTGGCTGTGGATCTTCTGTATTTGTCCTTCTTGGAATTCGCTGGGCTTCCCTTACGTAGATGAGTCACTTGCAGTGCACTTGAAGAGTTCTCTCTGCTGCCATGTACCAATCCCTGCCATACGTTCACTTTTTTATAATGGGGGAGAGATATGGCTAAAATCACCCAGCTATTCATTCATTTAACAGAAAATCAAATAACAATAACAAGTTCAGGAGAATGACTTTGTTGTATGCTTTTCCTGGGGAGATGCTACCACACAAGAACTTGCCCCAGATAGGAACCTATGATAACCCAAGTTTGGGTACCACCAAAGTCCAACTTGGAGAACCATTGATTTTATTAGTGTTGTTTTCAGGAATATGGGTGTTACTTACAGGGATAGAAATGGCTCAAAGAGCTGCATCACCGAAGGCCACCGCAGCATGGTGACAGGAACCTGGCACACACTGCACAGCCTGCAGGCAGCTCAACAGGCCAGAGAGTGTCCTTTAAAAGTGACTCAGTCTAAATCTCTTCCAGTACTCAACTGGTTTTTGCTTCTTACAAAAGAAGGTACCTGGTCTGGTCTCTTGAGTCTTCTGCTCAGCTTGGCCTGTTTTAGAATCTTCTTAGAAGAGCTATACTGAGTTGTTTACCTTTTGTCTTAAAGACTTTACTGCAGAGTAGATGTTCAGTTTTGGAGGAAATGCTATACAACAGCTACACATCAGAATTACAGTTGTTACCATATATTATCTAGTTGGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCACGCGTGTACTCAAGTGGTGGTGGCACATGCCTTTAATCTCAGCATTCAGAAGGCAGAGGCAAATGGATCTCTAATTCAAGGGAAGCCTGGTCTACAGAGGGAATTCCAGGATGGCCAGGGCTACACAGAGAAATCCTTTCTCAAAAAATCAATATATATGAATAATATATATGTGAACAGAAGCATATGGCCATATTGGAATGTGGACTGTAGCCCAGGCTGACCTGGAACTCACTATGTAGCCTAGGTTAGCTTCTAGCAGATGAGAACCTTCCTTCCTCAGATTCCCAATTACAGCATGAGTTACCACACCCCAATGGCTATGTTTACTTCATACTTTTAAATGTATCTGTTAATTTATTGACCATTGTATTACTTATTCTTTTATTGTTTCTTTTTTCTTAGTTCTTTATATACCTGGAGAGTAAAAGCAGGAACTTTTTTTTACCTGTTCTCTAAGCTATTTCATTATTCTGTTGTTTCCATTACTGTTCACAAGGTTTTTGTTAACATGATAAGATGCCATTGGCCAAGTCTATTCTTTCCCAAGATACTAGAGTCCTCTTCAGAAATATTTTACCGACACCTATATCAGAAAATATTTACCATACTTTTAGTAATTTAAAGGAGTTAGATTTATTATTAAGGTCTTTAATATTTTTAAACATTTTTTCTTTTCTTTTTAAGATTTATTTATTTATGGATATATAAGTACACTGTAGCTGTCTCTTTAGATACATCAGAAAAAGGCATCAGATCTCATTACCGATGGTTGTGAGCCACCAGTGGTTACTGGGATTTGAACTCAGGACCTCGGGAAGAGCAGTCAATGTACTTAACCACTGAGCCATCTCTCCACCCCCATTTTTTTGGGACAATTTTCCTGTGAGCTCTAGTGTTCTCTTTATTCAGGACTGCTTTGACTCTCTGTATTTTTTGGTGCTTCTATATGAACTTTTCTAGTTCTATGAAGAATGTCATTTGAATTTTGAAAATTACATTTAATCAGAAGGCCACTTTGGGTAACTGACATTTTTACAATTTTAATTCTGCCAATTTGTGAATGCAGGAGGTCCCTTAACTTTATAGTATATCTCTCAATTTCCTTCATACATGTTTTATAGTTTTCATCATAGAGACATTTTACTTTCTTGGTTAAGTTTATTCCTAGGTGCTTAAAATATTTTAGTCTTTATTTTTAATTATGTGTACAGTGGAATACATGAATCCAGTGCCCTCAGAGGCCAGAAGGCATCATAGTCCCCAGACCTAGAGTCACAAGCATCTGTATGCTGCCAGATGTCACTGCCATTTCTCCAGCCCCTATTCCTACTATTTTTTGATGGTATAGTAGATGGCATTGGTTTTCTGGTTTCTTTTTCAAGTTCAGTCCCTTTTTTTTTTTAAGCCACTCGCTCTTGTTTGTCTTGTTTGTTGATTTTGTATCTGGCCGCTTTGCTGAAATCATATCAGATCTTAGATTCTTCTATCTTTGGGTTTTAAATATAAGAACATATCTACAAATAGGGTACTTTGGCTTCATCCTTTTCCATTTGTTTCACTTTTATTTCTTTCTCTTGCCTTGTTGCTCTTGCTAAGATTTCAAGTGCTGTATTTTAAGAGTAATAGGAAAGGACAGAACATAGAACTTTCAGTGGTTTGGGGTAAATCTTTTCCAGTAGCCAGACAATTGGTGTTTAGTCCAACACTTTCTACATTGCTTTGTGAGTTTTACTGTGGGTTTCTGGAGATTAAAAAAAAAGATAATAATGTAGATACCTTTGAATCCTAAAGCAGCTCAGAAAAGACCTTAAGATGTCTTTTCAATAATACACAATAATCAAACAGTGGGAAATAGAACTTTCCCCAGTGCCAGTGTGCTATGCAGATGCCATATTCCACATTTAGGCTGTGCTTTCTTCTTAAATGAATTACTTTAAAATTTTTTTTACATCCCAATTGCTGCCCCTCCCTTCCAGTCCCTCTTCACAGAGTCCCTTCTCCTGTCCCCCTCCCCTTCTTGTCTTAGAGGGTGGGGCCCCTTTGGTAACTCTCCCTCACACATCTTGTGTCTTCAGGATTAGACATATCCTCTCCCACTGAGGCCAGAGAGGGCAGCCCTGCTGAGGAACAGATACCACGGACAGACAAGAGCTTTAGGGACAGCCTCTGCTGTAGTTGTTGGGGGAGCCACATGGAGACTTAGCTGCACATCTGCTGCATAGGTGCAGGGGCCTCGGTCAAGCCCTTGTATGCTCTTTGGTTGGTGGTTCAGTCTCTGAGAACTCCTAAGTGTCCAGGTTAATTGACTCTGTTGGCCTTCTTGTGGAGTTCCCATCCTCTTCAGGGCCCTCAGTCCTTTCTCCAACTCTTCTATATTACTCTCCGAGCTCCGTCCAGTGTTTGGCTCTGGGTATCTGTGTATATTTCAGTCGGCTGCTAGGTAGAGTGTCTCAGAGTCCTATCTGCTAGCATAACAGAATATCATTAATATTGTCAGGGATTGGTGCTTGCCCAGTCTCAAGTTGGGAGATGATGATTGGTTGGCCGTTCCCTCAGTCTCTACTCCATCTTTGTCCCTGCGTTTCTTGTAGACAGGACAAATTTTGGGTCTAAGGTTTTGTGGGTGGGTTAGTGTCCTCATCCCTCCACTGGTGGTCTCTCCTGGTCACGAAAGGTAGCCTCTTCAGGTTCCACTGCTATGCTTCTCAGCTAAGGTCACCCTGTAGACTCCAAGGAGTGCCTCCCAGGTCTCTGGCACTTCCTAGAGAGAGATTTTCCGCATTCCCTAGAGAGAGATTTTCCGCATTCATTCCCTAGAGAGAGATTTTCCGCATTCATTCCCTAGAGAGAGATTTTCCGCATTCCCCAGCCCAGCAGCTATACTTTGAGCTGTGCTTTTGCATACAGCTGAAGAGTGTTTTCTGAGTTTCTCCTTTTCTTTGCTTCAGTCCCCACTCTCTGCTGTGCCATTACCATATACAAGGGTGTTCTTTCCGGATCTACTCTCCAGAAGTATCAACATTTTCTCACATCTCTGTCTTTTTACAACTACAGTGCCTTCCTGCCACCGGCTATGTCTAAGGGTAGTTAGTTCCTCTCTAGCTGTGTCAATCCTATCCCCAGGAAAACTTGGCAATTATTGGGTGCCTATAATCTGAATAAGTCTCAGACTGTTAATAGCTCAGGCTATTAATCTTCCAACTTTTAACTCATGTTTCCTCCCAGCAGCTTTCTTTTGAGCTGTGACCCTCAGTCTTTTTTTTTTTTTCTTTTTTTCCGGAGCTGGGGACTGAACCCTGGGCATGTGCTTGCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCCCTGTGACCCTCAGTCTTATTTGATCTATTCCATACTACCCCTCATCTCATCTTAATTTTTGAAATCCAAATAAAGATCAAATAGTGAATTGTGAAGTGAATTTTCCTTTTGAGGCAGAGTCTCACTCTGTAACCAAGATTGGGGTGGAATTTTCAGCTGTCTTATCTCAGTGTAGAATTACAGCATGCACCATCACACCCAGCACAGAAATCCATATGAGTTCTAGCCTTCGTTTCTTAGTCTGAAAATTGAAATATAAGACCTTTTGTTAAACAAGGAATTTCTATTTCTCGTGTCTTAATCCGAAGTACAAGTTTTTCTTTGAATTAGTATTTGCTTGTATGTGCCATTTTAATAATTCTAATATCTAACCGTCAGCCCATTTGTTATCTCAGGTTGACCATTTCCAAACCATATCTTACTATAGGGTAGTATATGTAACCAACAATGAGGATTGAGAGGAAGAGGCAGAAAAAAATAAGAAGGCTGAATATGGGGGAAAGCAAGTACTTGGTTCTACTTAGGCTGTGAGACAAACACACCTGGCAGTTAATTTGGGTTATTTTTTAAATGCCCTATCTGGATCTGCTGACACATAAAGACTATGTTTTGCTGCTGCCAATTAAGTTCAATAAAATGGAAATGTTTCTAAGAAGGTTCAAGTGAACTTATTCCAGTAAACAATTTTCTAACACCTATGTTTACACCACTCTTCTTTGACACGTATGTTTATACCAGTCTTCTATGATATGTATGTTTACACCACTTTTATTGACATATGTTTACACGACTGGTCTTTGATCCATATGTTTAGACTGATCTTTTTAAAGCAATCAATAGCAGTATTTCCCACCAACATTTTATAAAGCTTTGCTCACTGTTTTAGCTGTAGCATAAATAAATGTTTCGTCCCAATGAATTCAGAACTAACTTAGTGCATTGCTCTGGCACACATGGATTCACTCACCTGAGAGTGCAGGATGGCCTCCTCCAGTGCTCTTTTGTTCCTGTTATTGAGAAACGACTCTTATAAGTGACTCTGGGTGAAGGAACAGTAACGAGGAGGAAGGAGGCATGCGTCCATGCAATTAGCCTCTATTCTAGAAAACTGCTCAGTGAACCACATTGTCATGCTTCTTCCCTTTTGCTTCTTGACCAG
Seq C2 exon
GTTATCAGTTACCAAAGCTTGACATGAATTTCCCATTGGATCATAGAGAAGAACCATGGGTAAAAGACTTAGAGGATCCCAAAGAAATGAAACAGTTACTTGATTCCAAGATTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000050562:ENSRNOT00000073827:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.681 A=NA C2=0.718
Domain overlap (PFAM):
C1:
PF0202312=SCAN=PD(0.1=0.0)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]