Special

ENSG00000050767 @ hg19

Biotype
protein_coding
Gene Symbol
COL23A1
Description
collagen, type XXIII, alpha 1 [Source:HGNC Symbol;Acc:22990]
Coordinates
chr5:177664619-178017556:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
57
chr5:177674776-177674832
-
78.96
39.82
0
Exon Skipping
78
chr5:177667462-177667539
-
9.99
86.11
0
Exon Skipping
63
chr5:177673392-177673454
-
96.89
43.88
0
Exon Skipping
63
chr5:177683867-177683929
-
73.42
60.1
0
Exon Skipping
36
chr5:177689218-177689253
-
86.97
43.74
0
Exon Skipping
27
chr5:177694308-177694334
-
86.12
31.5
0
Exon Skipping
54
chr5:177679545-177679598
-
91.68
33.38
0
Exon Skipping
163
chr5:177988845-177989007
-
2.03
51.61
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000063564 Col23a1 1-to-1
Mouse mm9 ENSMUSG00000063564 Col23a1 1-to-1
Rat rn6 ENSRNOG00000003349 LOC103693323 1-to-2
Rat rn6 ENSRNOG00000046785 Col23a1 1-to-2
Cow bosTau6 ENSBTAG00000013183 COL23A1 1-to-1
Chicken galGal4 ENSGALG00000006708 COL23A1 1-to-1
Chicken galGal3 ENSGALG00000006708 COL23A1 1-to-1
Zebrafish danRer10 ENSDARG00000089078 COL23A1 1-to-2
Zebrafish danRer10 ENSDARG00000095339 si:dkeyp-44a8.4 1-to-2
Fruitfly dm6 FBgn0259244 CG42342 8-to-1