Special

ENSG00000050767 @ hg38

Biotype
protein_coding
Gene Symbol
COL23A1
Description
collagen type XXIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22990]
Coordinates
chr5:178237618-178590555:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
57
chr5:178247775-178247831
-
90.28
35.38
0
Exon Skipping
78
chr5:178240461-178240538
-
6.98
79.66
0
Exon Skipping
63
chr5:178246391-178246453
-
97.22
30.34
0
Exon Skipping
63
chr5:178256866-178256928
-
70.78
78.14
0
Exon Skipping
36
chr5:178262217-178262252
-
87.15
44.13
0
Exon Skipping
27
chr5:178267307-178267333
-
85.63
32.09
0
Exon Skipping
54
chr5:178252544-178252597
-
92.13
33.38
0
Exon Skipping
67
chr5:178560682-178560748
-
97.75
52.04
0
Exon Skipping
8
chr5:178290362-178290369
-
86.42
75.38
0
Exon Skipping
276
chr5:178561731-178562006
-
2.75
66.44
0
Intron Retention
3547
chr5:178242395-178245941
-
9.14
33.9
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000063564 Col23a1 1-to-1
Mouse mm9 ENSMUSG00000063564 Col23a1 1-to-1
Rat rn6 ENSRNOG00000003349 LOC103693323 1-to-2
Rat rn6 ENSRNOG00000046785 Col23a1 1-to-2
Cow bosTau6 ENSBTAG00000013183 COL23A1 1-to-1
Chicken galGal4 ENSGALG00000006708 COL23A1 1-to-1
Chicken galGal3 ENSGALG00000006708 COL23A1 1-to-1
Zebrafish danRer10 ENSDARG00000089078 COL23A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 8-to-1