Special

ENSG00000062038 @ hg38

Biotype
protein_coding
Gene Symbol
CDH3
Description
cadherin 3 [Source:HGNC Symbol;Acc:HGNC:1762]
Coordinates
chr16:68636189-68722616:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
97.16
87.19
0
Alternative 3'ss
50
chr16:68684533-68684582
+
2.84
87.19
0
Alternative 3'ss
0
NA
+
87.17
90.32
0
Alternative 3'ss
98
chr16:68698093-68698190
+
12.83
90.32
0
Alternative 5'ss
0
NA
+
67.32
41.33
0
Alternative 5'ss
3
chr16:68654419-68654421
+
32.68
41.33
0
Exon Skipping
145
chr16:68678762-68678906
+
97.58
43.29
0
Exon Skipping
146
chr16:68685205-68685350
+
98.18
49.1
0
Exon Skipping
186
chr16:68682302-68682487
+
93.95
66.54
0
Exon Skipping
129
chr16:68680968-68681096
+
98.05
26.88
0
Exon Skipping
156
chr16:68678501-68678656
+
98.04
27.16
0
Exon Skipping
144
chr16:68678134-68678277
+
88.44
100
0
Intron Retention
211
chr16:68645425-68645635
+
11.07
60.87
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000061048 Cdh3 1-to-1
Mouse mm9 ENSMUSG00000061048 Cdh3 1-to-1
Rat rn6 ENSRNOG00000020129 Cdh3 1-to-1
Cow bosTau6 ENSBTAG00000033248 CDH3 1-to-1
Chicken galGal4 ENSGALG00000026291 CDH3 1-to-1
Zebrafish danRer10 ENSDARG00000035796 si:ch211-206i14.2 2-to-5
Zebrafish danRer10 ENSDARG00000058546 si:dkey-30c15.12 2-to-5
Zebrafish danRer10 ENSDARG00000102750 cdh1 2-to-5
Zebrafish danRer10 ENSDARG00000104332 si:dkey-173l11.3 2-to-5
Zebrafish danRer10 ENSDARG00000104440 si:dkey-173l11.5 2-to-5