Special

ENSG00000105717 @ hg38

Biotype
protein_coding
Gene Symbol
PBX4
Description
PBX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:13403]
Coordinates
chr19:19561707-19618916:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
61.46
98.08
0
Alternative 5'ss
101
chr19:19570586-19570686
-
38.54
98.08
0
Alternative 5'ss
0
NA
-
75.51
50.82
0
Alternative 5'ss
10
chr19:19570099-19570108
-
24.49
50.82
0
Exon Skipping
74
chr19:19599292-19599365
-
87.03
29.09
0
Exon Skipping
136
chr19:19569449-19569584
-
99.04
42.79
0
Intron Retention
28458
chr19:19570834-19599291
-
11.37
30.91
0
Intron Retention
286
chr19:19570300-19570585
-
64.68
100
0
Intron Retention
4359
chr19:19565090-19569448
-
10.64
35.59
0
Intron Retention
1317
chr19:19563616-19564932
-
12.23
27.47
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000031860 Pbx4 1-to-1
Mouse mm9 ENSMUSG00000031860 Pbx4 1-to-1
Rat rn6 ENSRNOG00000010736 Pbx4 1-to-1
Cow bosTau6 ENSBTAG00000009975 PBX4 1-to-1
Chicken galGal4 ENSGALG00000013419 PBX4 1-to-1
Chicken galGal3 ENSGALG00000013419 PBX4 1-to-1
Zebrafish danRer10 ENSDARG00000052150 pbx4 1-to-2
Zebrafish danRer10 ENSDARG00000104156 PBX4 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0000611 exd 4-to-1