Special

ENSG00000136169 @ hg38

Biotype
protein_coding
Gene Symbol
SETDB2
Description
SET domain bifurcated 2 [Source:HGNC Symbol;Acc:HGNC:20263]
Coordinates
chr13:49444374-49495003:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
357
chr13:49451553-49451909
+
84.9
78.89
0
Exon Skipping
36
chr13:49464021-49464056
+
16.46
100
0
Exon Skipping
100
chr13:49483464-49483563
+
96.03
30.95
0
Exon Skipping
94
chr13:49485630-49485723
+
94.86
56.14
0
Exon Skipping
341
chr13:49488290-49488630
+
96.51
27.09
0
Exon Skipping
89
chr13:49490822-49490910
+
94.64
93.98
0
Intron Retention
2566
chr13:49485724-49488289
+
14.94
45.11
0
Intron Retention
611
chr13:49480336-49480946
+
16.73
48.88
0
Intron Retention
3807
chr13:49464057-49467863
+
9.24
46.71
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000071350 Setdb2 1-to-1
Mouse mm9 ENSMUSG00000071350 Setdb2 1-to-1
Rat rn6 ENSRNOG00000021680 Setdb2 1-to-1
Cow bosTau6 ENSBTAG00000007329 SETDB2 1-to-1
Chicken galGal4 ENSGALG00000017006 SETDB2 1-to-1
Chicken galGal3 ENSGALG00000017006 F1N8V8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000101462 SETDB2 1-to-1