Special

ENSBTAG00000007329 @ bosTau6

Biotype
protein_coding
Gene Symbol
SETDB2
Description
SET domain, bifurcated 2 [Source:HGNC Symbol;Acc:HGNC:20263]
Coordinates
chr12:19111394-19147324:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
14.28
49.96
0
Alternative 5'ss
341
chr12:19127753-19128093
+
85.72
49.96
0
Exon Skipping
78
chr12:19117154-19117231
+
5.14
50.54
0
Exon Skipping
326
chr12:19142574-19142899
+
98.11
25.37
0
Intron Retention
2101
chr12:19140473-19142573
+
10.71
31.96
0
Intron Retention
3644
chr12:19142900-19146543
+
12.89
30.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136169 SETDB2 1-to-1
Human hg19 ENSG00000136169 SETDB2 1-to-1
Mouse mm10 ENSMUSG00000071350 Setdb2 1-to-1
Mouse mm9 ENSMUSG00000071350 Setdb2 1-to-1
Rat rn6 ENSRNOG00000021680 Setdb2 1-to-1
Chicken galGal4 ENSGALG00000017006 SETDB2 1-to-1
Chicken galGal3 ENSGALG00000017006 F1N8V8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000041243 setdb1a 1-to-1