Special

ENSG00000136169 @ hg19

Biotype
protein_coding
Gene Symbol
SETDB2
Description
SET domain, bifurcated 2 [Source:HGNC Symbol;Acc:20263]
Coordinates
chr13:50018510-50066306:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
357
chr13:50025689-50026045
+
86.1
39.12
0
Exon Skipping
36
chr13:50038157-50038192
+
13.24
84.55
0
Exon Skipping
100
chr13:50057600-50057699
+
95.72
27.96
0
Exon Skipping
341
chr13:50062426-50062766
+
95.5
23.26
0
Intron Retention
2566
chr13:50059860-50062425
+
12.5
38.83
0
Intron Retention
821
chr13:50065047-50065867
+
7.94
30.07
0
Intron Retention
611
chr13:50054472-50055082
+
18.28
48.72
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000071350 Setdb2 1-to-1
Mouse mm9 ENSMUSG00000071350 Setdb2 1-to-1
Rat rn6 ENSRNOG00000021680 Setdb2 1-to-1
Cow bosTau6 ENSBTAG00000007329 SETDB2 1-to-1
Chicken galGal4 ENSGALG00000017006 SETDB2 1-to-1
Chicken galGal3 ENSGALG00000017006 F1N8V8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000041243 setdb1a 1-to-1