Special

ENSG00000136531 @ hg38

Biotype
protein_coding
Gene Symbol
SCN2A
Description
sodium voltage-gated channel alpha subunit 2 [Source:HGNC Symbol;Acc:HGNC:10588]
Coordinates
chr2:165194993-165392310:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
135
chr2:165328404-165328538
+
2.48
28.12
0
Exon Skipping
92
chr2:165309165-165309256
+
38.75
100
3
Exon Skipping
92
chr2:165309352-165309443
+
45.66
96.37
3
Intron Retention
926
chr2:165296091-165297016
+
9.81
25.11
0
Intron Retention
2925
chr2:165370300-165373224
+
10.31
29.47
0
Intron Retention
2630
chr2:165374967-165377596
+
8.09
26.92
0
Intron Retention
10712
chr2:165297136-165307847
+
9.04
20.48
0
Intron Retention
557
chr2:165308795-165309351
+
15.68
45.78
0
Intron Retention
879
chr2:165309444-165310322
+
9.48
37.78
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000075318 Scn2a 1-to-1
Mouse mm9 ENSMUSG00000075318 Scn2a1 1-to-1
Rat rn6 ENSRNOG00000005018 Scn2a 1-to-1
Cow bosTau6 ENSBTAG00000038180 SCN2A 1-to-1
Chicken galGal4 ENSGALG00000011009 SCN2A 1-to-1
Chicken galGal3 ENSGALG00000011009 F1NN72_CHICK 1-to-1
Fruitfly dm6 FBgn0264255 para 10-to-1